FC923164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923164 vs. ExPASy Swiss-Prot
Match: RBS1_ACEAT (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Acetabularia acetabulum GN=RBCS-1 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 48/112 (42.86%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 367 KPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEF--DEVGYVHRENSRMPG-----YYDGRYWAMWKLPMFGC 681 K +K L K ++ + +K R M W P NNK FE S+LP L+D+ I+K++DY+L W PCLEF + Y EN G Y D RYW MWKLPMFGC Sbjct: 14 KECAKPLATPKVTLNKRGFATTIATKNREMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGC 125
BLAST of FC923164 vs. ExPASy Swiss-Prot
Match: RBS5_ACEAT (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia acetabulum GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19 Identity = 44/88 (50.00%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 439 SKTRCMKTWNPINNKKFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEF--DEVGYVHRENSRMPG-----YYDGRYWAMWKLPMFGC 681 +K R M W P NNK FE S+LP L+D+ I+K++DY+L W PCLEF + Y EN G Y D RYW MWKLPMFGC Sbjct: 39 NKNRDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGC 126
BLAST of FC923164 vs. ExPASy Swiss-Prot
Match: RBS3_ACEAT (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia acetabulum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19 Identity = 48/112 (42.86%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 367 KPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEF--DEVGYVHRENSRMPG-----YYDGRYWAMWKLPMFGC 681 K +K L K ++ + +K R M W P NNK FE S+LP L+D+ I+K++DY+L W PCLEF + Y EN G Y D RYW MWKLPMFGC Sbjct: 14 KECAKPLASPKVTLNKRGFATTIATKNRGMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGC 125
BLAST of FC923164 vs. ExPASy Swiss-Prot
Match: RBS_CHLMO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Chlamydomonas moewusii GN=RBCS PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.684e-19 Identity = 40/82 (48.78%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 457 KTWNPINNKKFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFDE--VGYVHRENS-----RMPGYYDGRYWAMWKLPMFGC 681 K W P+NNK++E SYLP L++ I +++DY++ GW PCLEF + +V N+ GYYD RYW MWKLPMFGC Sbjct: 30 KVWQPVNNKQYETFSYLPPLTNQKIGRQVDYIINNGWTPCLEFADPSTSFVSNANAVRLQGVSAGYYDNRYWTMWKLPMFGC 111
BLAST of FC923164 vs. ExPASy Swiss-Prot
Match: RBS1_ACECL (Ribulose bisphosphate carboxylase small chain 1 (Fragment) OS=Acetabularia cliftonii GN=RBCS-1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 1 Query: 499 SYLPSLSDDSIAKEIDYMLKKGWIPCLEF--DEVGYVHRENSRMPG-----YYDGRYWAMWKLPMFGC 681 SYLP L+D+ I+K++DY+L W PCLEF + Y +N G Y D RYW MWKLPMFGC Sbjct: 2 SYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWTMWKLPMFGC 69 The following BLAST results are available for this feature:
BLAST of FC923164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923164 ID=FC923164; Name=FC923164; organism=Citrus clementina; type=EST; length=697bpback to top |