FC923270

Overview
NameFC923270
Unique NameFC923270
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 5.130e-43
Identity = 95/219 (43.38%), Postives = 138/219 (63.01%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIM 689
            ++TY E+ K+T  F+  LG+GG+G+V+ G L +   VAVKML H    G +EF  EV  + R+HH H+V L+G+C +G+  ALIYE+M  G L + +  K    S   LSWE   +IA   A+G+EYLH GC   ++H D+KP NILL+   Q K++DFGL++    D     +T   GT GY+ PE +  N+  +S KSDVYS+G++LLE+V  + +M
Sbjct:  559 KFTYSEVLKMTKNFERVLGKGGFGTVYHGNL-DDTQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGK---HSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNW--LSEKSDVYSFGVVLLEIVTNQPVM 771          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.700e-43
Identity = 92/228 (40.35%), Postives = 142/228 (62.28%), Query Frame = 3
Query:    9 ENYRTVNPIRYTYKELKKITSRF--KHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            ++  T   +++ +K ++  T++F   ++LGQGG+G V++G   + + VAVK L    G G+ EF NEV  + ++ H ++VRLLGFC E + R L+YEF+PN SL+ FIF  T  S    L W +  KI  G+ARG+ YLHQ     I+H D+K  NILL  +   KI+DFG+A++   D +  +     GT GY++PE     +G+ S KSDVYS+G+++LE++  +K
Sbjct:  329 DDITTAGSLQFDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSL---LDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEY--AMYGQFSMKSDVYSFGVLVLEIISGKK 551          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 6.700e-43
Identity = 87/220 (39.55%), Postives = 136/220 (61.82%), Query Frame = 3
Query:   33 IRYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            +++  K ++  T  F   ++LG GG+G V++G L N   +AVK L    G G+ EF NEV  + ++ H ++VRLLGF  +G  + L+YEF+PN SL+ F+F   + +    L W   R I  G+ RG+ YLHQ    +I+H D+K  NILLD +  PKI+DFG+A++   D ++ +     GT GY++PE  +   G+ S KSDVYS+G+++LE++  +K
Sbjct:  345 VQFDLKTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLF---DPNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTH--GQFSMKSDVYSFGVLILEIISGKK 559          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.750e-43
Identity = 97/218 (44.50%), Postives = 140/218 (64.22%), Query Frame = 3
Query:   33 IRYTYKELKKITSRF--KHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ---EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            +R+  + +   T+ F  +++LGQGG+GSV++G L +   +AVK L   KG+GQ   EF NEV  + R+ H ++V+LLGFC+E +   L+YEF+PN SL+ FIF +      R L+W+    I  GVARG+ YLH+    RI+H D+K  NILLD    PK++DFG+A+L   D +    +   GT GY+APE     +G+ S KSDVYS+G+MLLEM+
Sbjct:  331 LRFDLRMIVTATNNFSLENKLGQGGFGSVYKGILPSGQEIAVKRLR--KGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDE---EKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEY--ATYGQFSTKSDVYSFGVMLLEMI 541          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 8.750e-43
Identity = 91/228 (39.91%), Postives = 140/228 (61.40%), Query Frame = 3
Query:    9 ENYRTVNPIRYTYKELKKITSRF--KHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            ++  T + ++  Y+ ++  T  F   +++GQGG+G V++G L +   VAVK L    G G+ EF NEV  + ++ H ++VRLLGFC +G  R L+YE++PN SL+ F+F          L W +  KI  GVARG+ YLHQ     I+H D+K  NILLD +  PKI+DFG+A++   D +  + +   GT GY++PE      G+ S KSDVYS+G+++LE++  +K
Sbjct:  315 DDITTADSLQLDYRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQ---LDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMH--GQYSMKSDVYSFGVLVLEIISGKK 537          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.143e-42
Identity = 91/228 (39.91%), Postives = 139/228 (60.96%), Query Frame = 3
Query:    9 ENYRTVNPIRYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            ++  T   +++ +K ++  T +F   ++LGQGG+G V++G L N + VAVK L    G G+ EF NEV  + ++ H ++V+LLGFC E   + L+YEF+ N SL+ F+F     S    L W    KI  G+ARG+ YLHQ     I+H D+K  NILLD +  PK++DFG+A++   D +        GT GY++PE     +G+ S KSDVYS+G+++LE++  RK
Sbjct:  318 DDITTAGSLQFDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQ---LDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEY--AMYGQFSMKSDVYSFGVLVLEIISGRK 540          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.143e-42
Identity = 93/228 (40.79%), Postives = 138/228 (60.53%), Query Frame = 3
Query:    9 ENYRTVNPIRYTYKELKKITSRF--KHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            ++  TV  +++  K+++  TS F   +++GQGG+G V++G L N   VAVK L      G+ EF NEV  + ++ H ++VRLLGF  +G  + L++EF+PN SL+ F+F  TN +    L W +   I  G+ RG+ YLHQ     I+H DIK  NILLD +  PKI+DFG+A+      +  S     GT GY+ PE  +   G+ S KSDVYS+G+++LE+V  RK
Sbjct:  324 DDITTVGYLQFDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAH--GQFSTKSDVYSFGVLILEIVSGRK 549          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.493e-42
Identity = 98/230 (42.61%), Postives = 141/230 (61.30%), Query Frame = 3
Query:   39 YTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEH-LKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIMILRLKFKPIY 719
            ++ +++K  T+ F   +R+G+GG+G V++GKLF+   +AVK L    K   +EF+NE+  I  +HH ++V+L G C EG +  L+YEF+ N SL + +F    +     L W   RKI  GVARG+ YLH+    +I+H DIK  N+LLD    PKISDFGLAKL  +D + +S T   GT GY+APE   R  G ++ K+DVYS+G++ LE+V  R   I R K    Y
Sbjct:  612 FSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLR--LDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHIS-TRIAGTFGYMAPEYAMR--GHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFY 836          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.493e-42
Identity = 91/228 (39.91%), Postives = 139/228 (60.96%), Query Frame = 3
Query:    9 ENYRTVNPIRYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            ++  T   +++ +K +   T  F   ++LGQGG+G V++G   + + VAVK L    G G+ EF NEV  + ++ H ++V+LLG+C EG  + L+YEF+PN SL+ F+F  T       L W +  KI  G+ARG+ YLHQ     I+H D+K  NILLD +  PK++DFG+A++   D +  +     GT GY+APE     +G+ S KSDVYS+G+++LE+V   K
Sbjct:  322 DDITTAGSLQFDFKAIVAATDIFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQ---LDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEY--AMYGKFSMKSDVYSFGVLVLEIVSGMK 544          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.949e-42
Identity = 97/223 (43.50%), Postives = 137/223 (61.43%), Query Frame = 3
Query:   24 VNPIRYTYKELKKITSRF--KHRLGQGGYGSVFRGKLFNRIPVAVKMLE--HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 680
            V P  +TY ELK  T  F   ++LG+GG+G V++GKL +   VAVK+L     +G GQ F+ E+  I  + H ++V+L G C EG  R L+YE++PNGSL++ +F +        L W    +I  GVARG+ YLH+    RI+H D+K  NILLD    PK+SDFGLAKL     + +S T   GT GY+APE   R  G ++ K+DVY++G++ LE+V  R
Sbjct:  676 VKPYTFTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGKGQ-FVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLH----LDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHIS-TRVAGTIGYLAPEYAMR--GHLTEKTDVYAFGVVALELVSGR 890          
The following BLAST results are available for this feature:
BLAST of FC923270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5189_ARATH5.130e-4343.38Probable LRR receptor-like protein kinase At1g5189... [more]
CRK4_ARATH6.700e-4340.35Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK17_ARATH6.700e-4339.55Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK37_ARATH8.750e-4344.50Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK10_ARATH8.750e-4339.91Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
CRK5_ARATH1.143e-4239.91Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK30_ARATH1.143e-4240.79Putative cysteine-rich receptor-like protein kinas... [more]
Y1534_ARATH1.493e-4242.61Probable LRR receptor-like serine/threonine-protei... [more]
CRK20_ARATH1.493e-4239.91Putative cysteine-rich receptor-like protein kinas... [more]
Y5614_ARATH1.949e-4243.50Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC31702H06EF StrClemenN Citrus clementina cDNA clone C31702H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923270 ID=FC923270; Name=FC923270; organism=Citrus clementina; type=EST; length=724bp
AGTTCCTCGAAAACTACAGGACCGTCAATCCCATCCGATATACTTACAAA
GAGCTGAAGAAAATAACAAGCAGATTTAAGCACAGGCTCGGCCAGGGAGG
TTACGGAAGCGTGTTCAGAGGAAAACTCTTCAACAGAATTCCAGTTGCTG
TCAAGATGTTGGAACATTTAAAAGGAAATGGACAAGAGTTCATCAATGAA
GTGGCCACAATTGGCAGGATTCACCACTTCCACATTGTTCGGCTTCTGGG
ATTTTGCTCTGAAGGAAACAGACGTGCTCTTATTTACGAGTTTATGCCCA
ACGGATCACTTGAGAAATTCATCTTCTCAAAGACAAATAGCTCAAGTCAT
CGTCCATTGAGTTGGGAGAAGCTGAGGAAGATTGCATTTGGCGTTGCCCG
TGGAGTGGAGTACTTGCACCAAGGATGCAACCAAAGGATCCTGCACTTCG
ATATCAAGCCTCACAATATATTATTAGACCATAATTTTCAACCGAAGATT
TCAGATTTTGGGCTGGCTAAGTTGTGCTCTAAGGACATAAGCATTGTATC
TCTGACAGCTGCCAGAGGCACTGCTGGCTACATTGCACCTGAACTTTTCT
CCAGGAATTTTGGTGAGGTCTCTTACAAGTCTGATGTTTACAGTTATGGA
ATGATGCTGTTAGAGATGGTCGGATGCAGAAAAATAATGATCCTGCGGTT
GAAATTCAAGCCAATATATTTTCC
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