FC923270

Overview
NameFC923270
Unique NameFC923270
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.209e-33
Identity = 88/227 (38.77%), Postives = 130/227 (57.27%), Query Frame = 3
Query:   39 YTYKELKKITSRFK--------HRLGQGGYGSVFRGKLFNRIPVAVKML--------EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            +++ ELK IT+ F         +R+G+GG+G V++G + N I VAVK L        E LK   Q+F  E+  +    H ++V LLGF S+ +   L+Y +MPNGSL   +     +    PLSW    K+A G A G+ +LH+  +   +H DIK  NILLD +F  KISDFGLA+  ++    V  +   GT  Y+APE      GE++ KSD+YS+G++LLE++
Sbjct:  168 FSFHELKSITNNFDEQPASAGGNRMGEGGFGVVYKGCVNNTI-VAVKKLGAMVEISTEELK---QQFDQEIKVMATCQHENLVELLGFSSDSDNLCLVYAYMPNGSLLDRLSCLDGTP---PLSWHTRCKVAQGTANGIRFLHENHH---IHRDIKSANILLDKDFTAKISDFGLARASARLAQTVMTSRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLELI 381          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.072e-32
Identity = 86/221 (38.91%), Postives = 125/221 (56.56%), Query Frame = 3
Query:   36 RYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-------QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            ++ Y+++ + T+ F   H +G GGY  V+R  L + I +AVK L              QEF+NEV  +  I H ++V+L GFCS      LIYE+M  GSL K +    N    + L+W K   +  GVA  + Y+H      I+H DI   NILLD+++  KISDFG AKL   D S  + +A  GT GY+APE F+    +V+ K DVYS+G+++LE++
Sbjct:  838 KFKYQDIIESTNEFDPTHLIGTGGYSKVYRANLQDTI-IAVKRLHDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLL---ANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSS--NWSAVAGTYGYVAPE-FAYTM-KVTEKCDVYSFGVLILELI 1050          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.072e-32
Identity = 80/219 (36.53%), Postives = 127/219 (57.99%), Query Frame = 3
Query:   39 YTYKELKKITSRFKHR--LGQGGYGSVFRGKLFN-RIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL-CSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 680
            +++ E+K  T  F     LG GG+G V+RG++      VA+K    +   G  EF  E+  + ++ H H+V L+G+C E     L+Y++M +G++ + ++   N S    L W++  +I  G ARG+ YLH G    I+H D+K  NILLD  +  K+SDFGL+K   + D + VS T  +G+ GY+ PE F R   +++ KSDVYS+G++L E +  R
Sbjct:  524 FSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNPS----LPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVS-TVVKGSFGYLDPEYFRRQ--QLTEKSDVYSFGVVLFEALCAR 735          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.400e-32
Identity = 83/207 (40.10%), Postives = 123/207 (59.42%), Query Frame = 3
Query:   87 LGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQE-------FINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI-VSLTAARGTAGYIAPEL-FSRNFGEVSYKSDVYSYGMMLLEMVGCR 680
            +G+G  G V++ ++ N   VAVK L   K N +E       F  E+  +G I H +IV+LLG+CS  + + L+Y + PNG+L++ +        +R L WE   KIA G A+G+ YLH  C   ILH D+K +NILLD  ++  ++DFGLAKL     +   +++   G+ GYIAPE  ++ N  E   KSDVYSYG++LLE++  R
Sbjct:  778 IGKGCSGIVYKAEIPNGDIVAVKKLWKTKDNNEEGESTIDSFAAEIQILGNIRHRNIVKLLGYCSNKSVKLLLYNYFPNGNLQQLL------QGNRNLDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITE---KSDVYSYGVVLLEILSGR 975          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.400e-32
Identity = 84/226 (37.17%), Postives = 136/226 (60.18%), Query Frame = 3
Query:   33 IRYTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV-GCRKIMILR 698
            I ++ +EL+K T  F     LGQGG G+V++G L +   VAVK  + +  +  +EFINEV  + +I+H +IV+LLG C E     L+YEF+PNG+L + +  + + +     +W    +IA  +A  + YLH   +  I H D+K  NI+LD  ++ K+SDFG ++  + D + ++ T   GT GY+ PE F  +  + + KSDVYS+G++L+E++ G + I  LR
Sbjct:  433 IVFSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENI--MATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLT-TVVSGTVGYMDPEYFQSS--QFTDKSDVYSFGVVLVELITGEKSISFLR 653          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.400e-32
Identity = 89/219 (40.64%), Postives = 125/219 (57.08%), Query Frame = 3
Query:   51 ELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKMLEHLKGN-GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVS---YKSDVYSYGMMLLEMVGCRKIM 689
            ++ K TS F     +G GG+G V++  L +   VA+K L    G   +EF  EV T+ R  H ++V LLG+C+  N + LIY +M NGSL+ ++  K +      L W+   +IA G A G+ YLHQ C   ILH DIK  NILL   F   ++DFGLA+L     + V+ T   GT GYI PE     +G+ S   YK DVYS+G++LLE++  R+ M
Sbjct:  735 DILKSTSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPS--LDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVT-TDLVGTLGYIPPE-----YGQASVATYKGDVYSFGVVLLELLTGRRPM 945          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.400e-32
Identity = 83/202 (41.09%), Postives = 116/202 (57.43%), Query Frame = 3
Query:   78 KHRLGQGGYGSVFRGKLFNRIPVAVKML---EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 671
            K+ +G+G +G V+R  L +    AVK L    H++ N Q  + E+ TIG++ H ++++L GF    +   ++Y +MP GSL   +     S     L W     +A GVA G+ YLH  C+  I+H DIKP NIL+D + +P I DFGLA+L   D S VS     GT GYIAPE  F    G    +SDVYSYG++LLE+V
Sbjct:  830 KYTIGRGAHGIVYRASLGSGKVYAVKRLVFASHIRAN-QSMMREIDTIGKVRHRNLIKLEGFWLRKDDGLMLYRYMPKGSLYDVLHGV--SPKENVLDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLL--DDSTVSTATVTGTTGYIAPENAFKTVRGR---ESDVYSYGVVLLELV 1023          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 85/224 (37.95%), Postives = 133/224 (59.38%), Query Frame = 3
Query:   39 YTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV-GCRKIMILR 698
            +  +EL+K T  F     LG+GG G+V++G L +   VAVK  + +  +  +EFINEV  + +I+H +IV+LLG C E +   L+YEF+PNG+L  F     +S  +   +WE   +IA  +A  + YLH   +  I H DIK  NI+LD   + K+SDFG ++  + D + ++ T   GT GY+ PE F  +  + + KSDVYS+G++L E++ G + +  LR
Sbjct:  421 FNSRELEKATENFSLTRILGEGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNL--FEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLT-TVVSGTVGYMDPEYFQSS--QFTDKSDVYSFGVVLAELITGEKSVSFLR 639          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 81/201 (40.30%), Postives = 115/201 (57.21%), Query Frame = 3
Query:   78 KHRLGQGGYGSVFRGKLFNRIPVAVKML---EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            K+ +G+G +G V+R  L +    AVK L   EH++ N Q    E+ TIG + H +++RL  F        ++Y++MPNGSL   +     +     L W     IA G++ G+ YLH  C+  I+H DIKP NIL+D + +P I DFGLA++   D S VS     GT GYIAPE   +     S +SDVYSYG++LLE+V
Sbjct:  797 KYIIGRGAHGVVYRASLGSGEEYAVKKLIFAEHIRAN-QNMKREIETIGLVRHRNLIRLERFWMRKEDGLMLYQYMPNGSLHDVLHR--GNQGEAVLDWSARFNIALGISHGLAYLHHDCHPPIIHRDIKPENILMDSDMEPHIGDFGLARIL--DDSTVSTATVTGTTGYIAPENAYKTVR--SKESDVYSYGVVLLELV 990          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.388e-32
Identity = 87/230 (37.83%), Postives = 136/230 (59.13%), Query Frame = 3
Query:   39 YTYKELKKITSRFKHRL--GQGGYGSVFRGKLFNR-------IPVAVKMLEH--LKGNGQEFINEVATIGRIHHFHIVRLLGFCSE----GNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            ++Y+EL K T  F  +L  G+GG+G V++GK+ +        + VA+K L    L+G+ Q ++ EV  +G ++H ++V+L+G+CSE    G  R L+YE+M N SLE  +F + + +    L W+K  +I  G A G+ YLH   + ++++ D K  N+LLD  F PK+SDFGLA+      +    TA  GT GY APE      G +  KSDVYS+G++L E++  R+
Sbjct:   74 FSYEELSKATYVFSRKLVIGEGGFGIVYKGKILSNGDSSDPPLVVAIKKLNRQGLQGHKQ-WLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRSHT----LPWKKRLEIMLGAAEGLTYLH---DLKVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQT--GHLRLKSDVYSFGVVLYEIITGRR 293          
The following BLAST results are available for this feature:
BLAST of FC923270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IRAK4_MOUSE8.209e-3338.77Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]
Y1571_ARATH1.072e-3238.91Probable leucine-rich repeat receptor-like protein... [more]
FERON_ARATH1.072e-3236.53Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
Y1341_ARATH1.400e-3240.10Probable LRR receptor-like serine/threonine-protei... [more]
WAKLH_ARATH1.400e-3237.17Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
PSKR1_DAUCA1.400e-3240.64Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
PEPR1_ARATH1.400e-3241.09Leucine-rich repeat receptor-like protein kinase P... [more]
WAKLJ_ARATH1.829e-3237.95Wall-associated receptor kinase-like 10 OS=Arabido... [more]
PEPR2_ARATH1.829e-3240.30Leucine-rich repeat receptor-like protein kinase P... [more]
Y5707_ARATH2.388e-3237.83Probable receptor-like protein kinase At5g47070 OS... [more]

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Properties
Property NameValue
Genbank descriptionC31702H06EF StrClemenN Citrus clementina cDNA clone C31702H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923270 ID=FC923270; Name=FC923270; organism=Citrus clementina; type=EST; length=724bp
AGTTCCTCGAAAACTACAGGACCGTCAATCCCATCCGATATACTTACAAA
GAGCTGAAGAAAATAACAAGCAGATTTAAGCACAGGCTCGGCCAGGGAGG
TTACGGAAGCGTGTTCAGAGGAAAACTCTTCAACAGAATTCCAGTTGCTG
TCAAGATGTTGGAACATTTAAAAGGAAATGGACAAGAGTTCATCAATGAA
GTGGCCACAATTGGCAGGATTCACCACTTCCACATTGTTCGGCTTCTGGG
ATTTTGCTCTGAAGGAAACAGACGTGCTCTTATTTACGAGTTTATGCCCA
ACGGATCACTTGAGAAATTCATCTTCTCAAAGACAAATAGCTCAAGTCAT
CGTCCATTGAGTTGGGAGAAGCTGAGGAAGATTGCATTTGGCGTTGCCCG
TGGAGTGGAGTACTTGCACCAAGGATGCAACCAAAGGATCCTGCACTTCG
ATATCAAGCCTCACAATATATTATTAGACCATAATTTTCAACCGAAGATT
TCAGATTTTGGGCTGGCTAAGTTGTGCTCTAAGGACATAAGCATTGTATC
TCTGACAGCTGCCAGAGGCACTGCTGGCTACATTGCACCTGAACTTTTCT
CCAGGAATTTTGGTGAGGTCTCTTACAAGTCTGATGTTTACAGTTATGGA
ATGATGCTGTTAGAGATGGTCGGATGCAGAAAAATAATGATCCTGCGGTT
GAAATTCAAGCCAATATATTTTCC
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