FC923270

Overview
NameFC923270
Unique NameFC923270
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.119e-32
Identity = 86/223 (38.57%), Postives = 132/223 (59.19%), Query Frame = 3
Query:   39 YTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATI-----GRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            +TY ++ K TS F     +G+GGYG+V+RG L +   VAVK L+      + EF  E+  +     G   H ++VRL G+C +G+ + L++E+M  GSLE+ I  KT       L W+K   IA  VARG+ +LH  C   I+H D+K  N+LLD +   +++DFGLA+L +   S VS T   GT GY+APE + + + + + + DVYSYG++ +E+   R+
Sbjct:  802 FTYADILKATSNFSEERVVGRGGYGTVYRGVLPDGREVAVKKLQREGTEAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELITDKTK------LQWKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVS-TVIAGTIGYVAPE-YGQTW-QATTRGDVYSYGVLTMELATGRR 1015          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.119e-32
Identity = 84/222 (37.84%), Postives = 129/222 (58.11%), Query Frame = 3
Query:   39 YTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIMIL 695
            +T KEL+K T  F     LG GG G+V++G L +   VAVK  + +  +  QEFINEV  + +I+H H+V+LLG C E     L+YEF+ NG+L K I  +   +    + W    +IA  +A  + YLH   +  I H DIK  NILLD  ++ K++DFG ++  + D +  + T   GT GY+ PE +  +  + + KSDVYS+G++L E++   K +I+
Sbjct:  432 FTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEE--EADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWT-TVISGTVGYVDPEYYRSS--QYTEKSDVYSFGVILAELITGDKPVIM 648          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.119e-32
Identity = 84/214 (39.25%), Postives = 128/214 (59.81%), Query Frame = 3
Query:   39 YTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKMLEHL-KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            ++  EL+K T  F     LGQGG G+V++G L +   VAVK  + + +   +EFINEV  + +I+H +IV+LLG C E     L+YEF+PNG L K +  + +      ++WE    IA  +A  + YLH   +  I H DIK  NILLD  +Q K+SDFG ++  + D + ++ T   GT GY+ PE F  +  + + KSDVYS+G++L+E++
Sbjct:  412 FSSNELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYI---MTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLT-TQVAGTFGYVDPEYFQSS--KFTDKSDVYSFGVVLVELI 619          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.119e-32
Identity = 86/227 (37.89%), Postives = 131/227 (57.71%), Query Frame = 3
Query:   39 YTYKELKKITSRFKHRL--GQGGYGSVFRGKLFNRIPVAVKMLEHLKGN-GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD-----ISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIMIL 695
            + ++E+   TS F   L  G G YG+V++  L +   V VK+L+  +    ++F  E+  + +I H H+V LLG C E  + AL+YE+M NGSLE  +F   NS    PL W +  +IA+ VA  + +LH+   + I+H D+KP NILLDHNF  K+ D GL+ +   D      +I   T+  GT  YI PE   +  G +S KSD+YS+GM+LL+++  +  + L
Sbjct:  468 FAWEEIMAATSSFSEELKIGMGAYGAVYKCNLHHTTAV-VKVLQSAENQLSKQFQQELEILSKIRHPHLVLLLGACPE--QGALVYEYMENGSLEDRLFQVNNSP---PLPWFERFRIAWEVAAALVFLHKSKPKPIIHRDLKPANILLDHNFVSKVGDVGLSTMVQVDPLSTKFTIYKQTSPVGTLCYIDPEY--QRTGRISSKSDIYSFGMILLQLLTAKPAIAL 686          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: KPEL_DROME (Serine/threonine-protein kinase pelle OS=Drosophila melanogaster GN=pll PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.074e-32
Identity = 82/224 (36.61%), Postives = 129/224 (57.59%), Query Frame = 3
Query:   45 YKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-------QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI-SIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKI 686
            Y EL+  T  +   +RLGQGG+G V+RGK + ++ VA+K++ +   N        Q+  NE+  +  I H +I+ L G+  +G +  L+Y+ M  GSLE  + +    +    L+W++   I+ G ARG+ +LH      ++H DIKP NILLD   QPKI DFGL +   K + ++V +    GT  Y+ PE   RNF ++S   DVYS+G++LLE+   R++
Sbjct:  203 YAELENATDGWSPDNRLGQGGFGDVYRGK-WKQLDVAIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKGGKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPEF--RNFRQLSTGVDVYSFGIVLLEVFTGRQV 423          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32
Identity = 85/214 (39.72%), Postives = 132/214 (61.68%), Query Frame = 3
Query:   39 YTYKELKKITSRF-KHR-LGQGGYGSVFRGKLFNRIPVAVKMLEHL-KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            ++  EL+K T  F K+R LGQGG G+V++G L +   VAVK  + + +   +EFINEV  + +I+H +IV+LLG C E     L+YEF+PNG L K +  +++  +   ++WE    IA  +A  + YLH   +  I H DIK  NILLD   + K+SDFG ++  + D + ++ T   GT GY+ PE F  +  + + KSDVYS+G++L+E++
Sbjct:  404 FSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYT---MTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLT-TQVAGTFGYVDPEYFQSS--KFTEKSDVYSFGVVLVELL 611          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32
Identity = 87/224 (38.84%), Postives = 131/224 (58.48%), Query Frame = 3
Query:   39 YTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIMILR 698
            +T   +KK T+ +     LGQGG G+V++G L +   VA+K    L  + Q  +FINEV  + +I+H ++V+LLG C E     L+YEF+ NG+L   +      SS   L+WE   KIA  VA  + YLH   +  I+H DIK  NILLD N   K++DFG ++L   D   +  T  +GT GY+ PE +  N G ++ KSDVYS+G++L+E++  +K +  +
Sbjct:  397 FTEDGMKKATNGYAESRILGQGGQGTVYKGILPDNSIVAIKKAR-LGDSSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDSS---LTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELE-TMVQGTLGYLDPEYY--NTGLLNEKSDVYSFGVVLMELLSGQKALCFK 613          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32
Identity = 79/207 (38.16%), Postives = 119/207 (57.49%), Query Frame = 3
Query:   78 KHRLGQGGYGSVFRGKLFNRIPVAVKMLEH--LKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEV-SYKSDVYSYGMMLLEMVGCRKIM 689
            K+ +G+G +G++++  L      AVK L    +K      + E+ TIG++ H ++++L  F        ++Y +M NGSL   I  +TN    +PL W     IA G A G+ YLH  C+  I+H DIKP NILLD + +P ISDFG+AKL  +  + +     +GT GY+APE     F  V S +SDVYSYG++LLE++  +K +
Sbjct:  819 KYVIGKGAHGTIYKATLSPDKVYAVKKLVFTGIKNGSVSMVREIETIGKVRHRNLIKLEEFWLRKEYGLILYTYMENGSLHD-ILHETNPP--KPLDWSTRHNIAVGTAHGLAYLHFDCDPAIVHRDIKPMNILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAPE---NAFTTVKSRESDVYSYGVVLLELITRKKAL 1019          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32
Identity = 88/207 (42.51%), Postives = 121/207 (58.45%), Query Frame = 3
Query:   87 LGQGGYGSVFRGKLFNRIPVAVKML----------EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSK-DISIVSLTAARGTAGYIAPEL-FSRNFGEVSYKSDVYSYGMMLLEMV 671
            +G+G  G V+R  + N   +AVK L          E  K     F  EV T+G I H +IVR LG C   N R L+Y++MPNGSL   +  +  SS    L W+   +I  G A+G+ YLH  C   I+H DIK +NIL+  +F+P I+DFGLAKL  + DI   S T A G+ GYIAPE  +S    +++ KSDVYSYG+++LE++
Sbjct:  792 IGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSS----LDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVA-GSYGYIAPEYGYSM---KITEKSDVYSYGVVVLEVL 990          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32
Identity = 76/208 (36.54%), Postives = 125/208 (60.10%), Query Frame = 3
Query:   54 LKKITS-RFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHL-KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            +KK+ S   +H +G GG+G+V++  + +    A+K +  L +G  + F  E+  +G I H ++V L G+C+    + L+Y+++P GSL++ +  +        L W+    I  G A+G+ YLH  C+ RI+H DIK  NILLD N + ++SDFGLAKL   + S ++ T   GT GY+APE      G  + K+DVYS+G+++LE++
Sbjct:  298 IKKLESLNEEHIIGCGGFGTVYKLSMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHKRGEQ-----LDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT-TIVAGTFGYLAPEYMQS--GRATEKTDVYSFGVLVLEVL 497          
The following BLAST results are available for this feature:
BLAST of FC923270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1743_ARATH3.119e-3238.57Probable LRR receptor-like serine/threonine-protei... [more]
WAKLM_ARATH3.119e-3237.84Wall-associated receptor kinase-like 17 OS=Arabido... [more]
WAKLD_ARATH3.119e-3239.25Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
PUB35_ARATH3.119e-3237.89U-box domain-containing protein 35 OS=Arabidopsis ... [more]
KPEL_DROME4.074e-3236.61Serine/threonine-protein kinase pelle OS=Drosophil... [more]
WAKLB_ARATH6.949e-3239.72Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
WAK1_ARATH6.949e-3238.84Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
RPK1_IPONI6.949e-3238.16Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
RCH2_ARATH6.949e-3242.51Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
FEI2_ARATH6.949e-3236.54LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC31702H06EF StrClemenN Citrus clementina cDNA clone C31702H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923270 ID=FC923270; Name=FC923270; organism=Citrus clementina; type=EST; length=724bp
AGTTCCTCGAAAACTACAGGACCGTCAATCCCATCCGATATACTTACAAA
GAGCTGAAGAAAATAACAAGCAGATTTAAGCACAGGCTCGGCCAGGGAGG
TTACGGAAGCGTGTTCAGAGGAAAACTCTTCAACAGAATTCCAGTTGCTG
TCAAGATGTTGGAACATTTAAAAGGAAATGGACAAGAGTTCATCAATGAA
GTGGCCACAATTGGCAGGATTCACCACTTCCACATTGTTCGGCTTCTGGG
ATTTTGCTCTGAAGGAAACAGACGTGCTCTTATTTACGAGTTTATGCCCA
ACGGATCACTTGAGAAATTCATCTTCTCAAAGACAAATAGCTCAAGTCAT
CGTCCATTGAGTTGGGAGAAGCTGAGGAAGATTGCATTTGGCGTTGCCCG
TGGAGTGGAGTACTTGCACCAAGGATGCAACCAAAGGATCCTGCACTTCG
ATATCAAGCCTCACAATATATTATTAGACCATAATTTTCAACCGAAGATT
TCAGATTTTGGGCTGGCTAAGTTGTGCTCTAAGGACATAAGCATTGTATC
TCTGACAGCTGCCAGAGGCACTGCTGGCTACATTGCACCTGAACTTTTCT
CCAGGAATTTTGGTGAGGTCTCTTACAAGTCTGATGTTTACAGTTATGGA
ATGATGCTGTTAGAGATGGTCGGATGCAGAAAAATAATGATCCTGCGGTT
GAAATTCAAGCCAATATATTTTCC
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