FC923270

Overview
NameFC923270
Unique NameFC923270
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 6.933e-40
Identity = 90/224 (40.18%), Postives = 133/224 (59.38%), Query Frame = 3
Query:   21 TVNPIRYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQE-FINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            T   +++ +K ++  T+ F+  ++LG GG+G VF+G   N   VAVK L  + G G+E F NEV  + ++ H ++VRLLGF  EG  + L+YE+MPN SL+ F+F          L W     I  GV RG+ YLHQ     I+H D+K  NILLD +  PKI+DFG+A+    D +  +     GT GY+ PE  +   G+ S KSDVYS+G+++LE++  +K
Sbjct:  317 TSGSLQFDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRGQ---LDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVAN--GQFSMKSDVYSFGVLILEIIVGKK 535          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.933e-40
Identity = 87/219 (39.73%), Postives = 138/219 (63.01%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            + T+  L + T+ F     +G GG+G V++ +L +   VA+K L  + G G +EF+ E+ TIG+I H ++V LLG+C  G  R L+YE+M  GSLE  +  K++      L+W   +KIA G ARG+ +LH  C   I+H D+K  N+LLD +F+ ++SDFG+A+L S   + +S++   GT GY+ PE + ++F   + K DVYSYG++LLE++  +K
Sbjct:  846 KLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYY-QSF-RCTAKGDVYSYGVILLELLSGKK 1062          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.055e-40
Identity = 87/213 (40.85%), Postives = 133/213 (62.44%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            ++TY E+  +T+ F+  LG+GG+G V+ G +     VAVKML H    G ++F  EV  + R+HH ++V L+G+C EG++ ALIYE+M NG L++ +  K   S    L+W    KIA   A+G+EYLH GC   ++H D+K  NILL+ +F  K++DFGL++    +      T   GT GY+ PE +  N+  ++ KSDVYS+G++LL M+
Sbjct:  566 KFTYAEVLTMTNNFQKILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSI---LNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNW--LTEKSDVYSFGVVLLVMI 773          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 9.055e-40
Identity = 95/220 (43.18%), Postives = 134/220 (60.91%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKML--EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            R+T +EL   T  F ++  LG+GG+G V++G+L +   VAVK L  E  KG   +F  EV  I    H +++RL GFC     R L+Y +M NGS+   +  +     +  L W K + IA G ARG+ YLH  C+Q+I+H D+K  NILLD  F+  + DFGLAKL + + S V+ TA RGT G+IAPE  S   G+ S K+DV+ YG+MLLE++  +K
Sbjct:  281 RFTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL--RERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVT-TAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQK 495          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.055e-40
Identity = 88/215 (40.93%), Postives = 136/215 (63.26%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            + T+ +L + T+ F +   +G GG+G V++ +L +   VA+K L H+ G G +EF  E+ TIG+I H ++V LLG+C  G  R L+YE+M  GSLE  +  +  +     L+W   RKIA G ARG+ +LH  C   I+H D+K  N+LLD N + ++SDFG+A+L S   + +S++   GT GY+ PE + ++F   S K DVYSYG++LLE++
Sbjct:  875 KLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIK--LNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYY-QSF-RCSTKGDVYSYGVVLLELL 1085          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.183e-39
Identity = 92/221 (41.63%), Postives = 135/221 (61.09%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK--LCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIM 689
            R+TY E+ ++T   +  LG+GG+G V+ G L     VAVK+L      G +EF  EV  + R+HH ++V L+G+C E +  ALIYE+M NG L + +  K   S    L+W    +IA   A G+EYLH GC   ++H D+K  NILLD  F+ KI+DFGL++      D S VS T   GT GY+ PE +  +  E+S KSDVYS+G++LLE++  ++++
Sbjct:  555 RFTYSEVMEMTKNLQRPLGEGGFGVVYHGDLNGSEQVAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHGGSV---LNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVS-TVVAGTLGYLDPEYYLTS--ELSEKSDVYSFGILLLEIITNQRVI 769          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.017e-39
Identity = 88/228 (38.60%), Postives = 137/228 (60.09%), Query Frame = 3
Query:    9 ENYRTVNPIRYTYKELKKITSRF--KHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            ++  T + ++  Y+ ++  T+ F   +++G+GG+G V++G   N   VAVK L      G+ EF  EV  + ++ H ++VRLLGF  +G  R L+YE+MPN SL+  +F  T  +    L W +   I  G+ARG+ YLHQ     I+H D+K  NILLD +  PKI+DFG+A++   D +  + +   GT GY+APE      G+ S KSDVYS+G+++LE++  RK
Sbjct:  331 DDMATADSLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQ---LDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMH--GQFSMKSDVYSFGVLVLEIISGRK 553          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.017e-39
Identity = 86/228 (37.72%), Postives = 134/228 (58.77%), Query Frame = 3
Query:    9 ENYRTVNPIRYTYKELKKITSRFKH--RLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQE-FINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            ++  T   +++ +K ++  T  F +  +LG GG+G V++G   N   VAVK L    G G+E F NEV  + ++ H ++V+LLG+  +G+ + L+YEF+PN SL+ F+F          L W +   I  G+ RG+ YLHQ     I+H D+K  NILLD +  PKI DFG+A+    D +  +     GT GY+ PE  +   G+ S KSDVYS+G+++LE++G +K
Sbjct:  290 DDITTSGSLQFEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKGQ---LDWTRRYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGTIGYMPPEYVTN--GQFSTKSDVYSFGVLILEIIGGKK 512          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.017e-39
Identity = 88/215 (40.93%), Postives = 135/215 (62.79%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            + T+ +L + T+ F +   +G GG+G V++ +L +   VA+K L H+ G G +EF  E+ TIG+I H ++V LLG+C  G  R L+YE+M  GSLE  +  +        L+W   RKIA G ARG+ +LH  C   I+H D+K  N+LLD N + ++SDFG+A+L S   + +S++   GT GY+ PE + ++F   S K DVYSYG++LLE++
Sbjct:  875 KLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIK--LNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYY-QSF-RCSTKGDVYSYGVVLLELL 1085          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.017e-39
Identity = 96/228 (42.11%), Postives = 137/228 (60.09%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKML--EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS-KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV-GCRKIMILRL 701
            R++ +EL+  +  F ++  LG+GG+G V++G+L +   VAVK L  E  +G   +F  EV  I    H +++RL GFC     R L+Y +M NGS+   +  +    S  PL W K ++IA G ARG+ YLH  C+ +I+H D+K  NILLD  F+  + DFGLAKL   KD  +   TA RGT G+IAPE  S   G+ S K+DV+ YG+MLLE++ G R   + RL
Sbjct:  276 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL--RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT--TAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARL 497          
The following BLAST results are available for this feature:
BLAST of FC923270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK16_ARATH6.933e-4040.18Putative cysteine-rich receptor-like protein kinas... [more]
BRL1_ARATH6.933e-4039.73Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y5181_ARATH9.055e-4040.85Probable LRR receptor-like serine/threonine-protei... [more]
SERK4_ARATH9.055e-4043.18Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
BRI1_SOLPE9.055e-4040.93Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
MEE39_ARATH1.183e-3941.63Probable LRR receptor-like serine/threonine-protei... [more]
CRK8_ARATH2.017e-3938.60Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK24_ARATH2.017e-3937.72Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
BRI1_SOLLC2.017e-3940.93Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
BAK1_ARATH2.017e-3942.11BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]

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Properties
Property NameValue
Genbank descriptionC31702H06EF StrClemenN Citrus clementina cDNA clone C31702H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923270 ID=FC923270; Name=FC923270; organism=Citrus clementina; type=EST; length=724bp
AGTTCCTCGAAAACTACAGGACCGTCAATCCCATCCGATATACTTACAAA
GAGCTGAAGAAAATAACAAGCAGATTTAAGCACAGGCTCGGCCAGGGAGG
TTACGGAAGCGTGTTCAGAGGAAAACTCTTCAACAGAATTCCAGTTGCTG
TCAAGATGTTGGAACATTTAAAAGGAAATGGACAAGAGTTCATCAATGAA
GTGGCCACAATTGGCAGGATTCACCACTTCCACATTGTTCGGCTTCTGGG
ATTTTGCTCTGAAGGAAACAGACGTGCTCTTATTTACGAGTTTATGCCCA
ACGGATCACTTGAGAAATTCATCTTCTCAAAGACAAATAGCTCAAGTCAT
CGTCCATTGAGTTGGGAGAAGCTGAGGAAGATTGCATTTGGCGTTGCCCG
TGGAGTGGAGTACTTGCACCAAGGATGCAACCAAAGGATCCTGCACTTCG
ATATCAAGCCTCACAATATATTATTAGACCATAATTTTCAACCGAAGATT
TCAGATTTTGGGCTGGCTAAGTTGTGCTCTAAGGACATAAGCATTGTATC
TCTGACAGCTGCCAGAGGCACTGCTGGCTACATTGCACCTGAACTTTTCT
CCAGGAATTTTGGTGAGGTCTCTTACAAGTCTGATGTTTACAGTTATGGA
ATGATGCTGTTAGAGATGGTCGGATGCAGAAAAATAATGATCCTGCGGTT
GAAATTCAAGCCAATATATTTTCC
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