FC923270

Overview
NameFC923270
Unique NameFC923270
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.665e-39
Identity = 92/214 (42.99%), Postives = 139/214 (64.95%), Query Frame = 3
Query:   39 YTYKELKKITSRF--KHRLGQGGYGSVFRGKLFNRIPVAVKMLE-HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            ++Y+ L++ T  F  K++LGQGG GSV++G L N   VAVK L  + K     F NEV  I ++ H ++V+LLG    G    L+YE++ N SL  ++F + +    +PL+W K  KI  G A G+ YLH+  N RI+H DIK  NILL+ +F P+I+DFGLA+L  +D + +S TA  GT GY+APE   R  G+++ K+DVYS+G++++E++
Sbjct:  311 FSYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVAVKRLFFNTKQWVDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDV---QPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHIS-TAIAGTLGYMAPEYVVR--GKLTEKADVYSFGVLMIEVI 518          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.665e-39
Identity = 88/220 (40.00%), Postives = 129/220 (58.64%), Query Frame = 3
Query:   33 IRYTYKELKKITSRF--KHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            +R+ ++ +K  TS F   ++LG GG+G+V++G   N   VA K L      G+ EF NEV  + R+ H ++V LLGF  EG  + L+YEF+PN SL+ F+F          L W +   I  G+ RG+ YLHQ     I+H D+K  NILLD    PKI+DFGLA+    + +  +     GT GY+ PE  +   G+ S KSDVYS+G+++LE++G +K
Sbjct:  349 LRFDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTEVAAKRLSKPSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQ---LDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVAN--GQFSTKSDVYSFGVLILEIIGGKK 563          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.001e-38
Identity = 92/222 (41.44%), Postives = 134/222 (60.36%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRL--GQGGYGSVFRGKLFNRIPVAVKMLE-HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL-CSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIM 689
            ++T  E++  T  F   L  G GG+G V+RG+L +   +A+K    H +    EF  E+  + R+ H H+V L+GFC E N   L+YE+M NG+L   +F     S+  PLSW++  +   G ARG+ YLH G  + I+H D+K  NILLD NF  K+SDFGL+K   S D + VS TA +G+ GY+ PE F R   +++ KSDVYS+G++L E V  R ++
Sbjct:  507 KFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFG----SNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVS-TAVKGSFGYLDPEYFRRQ--QLTEKSDVYSFGVVLFEAVCARAVI 721          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.001e-38
Identity = 93/220 (42.27%), Postives = 133/220 (60.45%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKML--EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            R++ +EL   T +F  R  LG+G +G +++G+L +   VAVK L  E  KG   +F  EV  I    H +++RL GFC     R L+Y +M NGS+   +  +     +  L W K + IA G ARG+ YLH  C+Q+I+H D+K  NILLD  F+  + DFGLAKL + + S V+ TA RGT G+IAPE  S   G+ S K+DV+ YG+MLLE++  +K
Sbjct:  262 RFSLRELLVATEKFSKRNVLGKGRFGILYKGRLADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL--RERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVT-TAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQK 476          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.001e-38
Identity = 94/214 (43.93%), Postives = 134/214 (62.62%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKMLE-HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 668
            ++ Y+ L+K T  F H+  LGQGG G+VF G L N   VAVK L  + +   +EF NEV  I  I H ++V+LLG   EG    L+YE++PN SL++F+F ++ S   + L+W +   I  G A G+ YLH G   RI+H DIK  N+LLD    PKI+DFGLA+    D + +S T   GT GY+APE   R  G+++ K+DVYS+G+++LE+
Sbjct:  302 KFKYETLEKATDYFSHKKMLGQGGNGTVFLGILPNGKNVAVKRLVFNTRDWVEEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQS---KVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLS-TGIAGTLGYMAPEYVVR--GQLTEKADVYSFGVLVLEI 509          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.308e-38
Identity = 86/224 (38.39%), Postives = 132/224 (58.93%), Query Frame = 3
Query:   21 TVNPIRYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            T+  ++  Y+ ++  T+ F   +++G+GG+G V++G   N   VAVK L      G  EF NEV  +  + H ++VR+LGF  E   R L+YE++ N SL+ F+F          L W +   I  G+ARG+ YLHQ     I+H D+K  NILLD +  PKI+DFG+A++   D +  + +   GT GY++PE   R  G+ S KSDVYS+G+++LE++  RK
Sbjct:  318 TIESLQLDYRAIQAATNDFSENNKIGRGGFGDVYKGTFSNGTEVAVKRLSKTSEQGDTEFKNEVVVVANLRHKNLVRILGFSIEREERILVYEYVENKSLDNFLFDPAKKGQ---LYWTQRYHIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMR--GQFSMKSDVYSFGVLVLEIISGRK 536          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.708e-38
Identity = 96/219 (43.84%), Postives = 131/219 (59.82%), Query Frame = 3
Query:   39 YTYKELKKITSRFKH--RLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLC---SKDI--SIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 668
            + Y  LKK T+ F    +LG GGYG VF+G L +   +A+K L H+ G     E  NE+  I R  H ++VRLLG C       ++YEF+ N SL+  +F   N    + L W+K R I  G A G+EYLH+ C  +I+H DIK  NILLD  ++PKISDFGLAK      KDI  S +S ++  GT GY+APE  S+  G +S K D YS+G+++LE+
Sbjct:  319 FEYSTLKKATNNFNESCKLGVGGYGEVFKGTLSDGREIAIKRL-HVSGKKPRDEIHNEIDVISRCQHKNLVRLLGCCFTNMNSFIVYEFLANTSLDHILF---NPEKKKELDWKKRRTIILGTAEGLEYLHETC--KIIHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSLSPSSIAGTLGYMAPEYISK--GRLSNKIDAYSFGVLVLEI 529          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.230e-38
Identity = 97/228 (42.54%), Postives = 137/228 (60.09%), Query Frame = 3
Query:   36 RYTYKELKKITSRF--KHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQE--FINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV-GCRKIMILRLK 704
            R+ ++EL+  T  F  K+ LGQGG+G V++G L +   VAVK L   +  G +  F  EV  I    H +++RL+GFC+    R L+Y FM N SL   +  +   +    L WE  ++IA G ARG EYLH+ CN +I+H D+K  N+LLD +F+  + DFGLAKL     + V+ T  RGT G+IAPE  S   G+ S ++DV+ YG+MLLE+V G R I   RL+
Sbjct:  277 RFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRL--REIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVT-TQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAIDFSRLE 499          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.230e-38
Identity = 95/228 (41.67%), Postives = 136/228 (59.65%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKML--EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS-KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV-GCRKIMILRL 701
            R++ +EL+  T  F ++  LG+GG+G V++G+L +   VAVK L  E   G   +F  EV  I    H +++RL GFC     R L+Y +M NGS+   +  +    S  PL+W   ++IA G ARG+ YLH  C+ +I+H D+K  NILLD  F+  + DFGLA+L   KD  +   TA RGT G+IAPE  S   G+ S K+DV+ YG+MLLE++ G R   + RL
Sbjct:  292 RFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL--RERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVT--TAVRGTIGHIAPEYLST--GKSSEKTDVFGYGIMLLELITGQRAFDLARL 513          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.230e-38
Identity = 95/228 (41.67%), Postives = 135/228 (59.21%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKML--EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS-KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV-GCRKIMILRL 701
            R++ +EL+  +  F ++  LG+GG+G V++G+L +   VAVK L  E   G   +F  EV  I    H +++RL GFC     R L+Y +M NGS+   +  +    S  PL W   ++IA G ARG+ YLH  C+ +I+H D+K  NILLD  F+  + DFGLAKL   KD  +   TA RGT G+IAPE  S   G+ S K+DV+ YG+MLLE++ G R   + RL
Sbjct:  289 RFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL--RERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT--TAVRGTIGHIAPEYLST--GKSSEKTDVFGYGIMLLELITGQRAFDLARL 510          
The following BLAST results are available for this feature:
BLAST of FC923270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK3_ARATH7.665e-3942.99Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
CRK21_ARATH7.665e-3940.00Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
Y1357_ARATH1.001e-3841.44Probable receptor-like protein kinase At1g30570 OS... [more]
SERK5_ARATH1.001e-3842.27Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
CRK42_ARATH1.001e-3843.93Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
CRK7_ARATH1.308e-3838.39Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK43_ARATH1.708e-3843.84Putative cysteine-rich receptor-like protein kinas... [more]
Y5129_ARATH2.230e-3842.54Probable LRR receptor-like serine/threonine-protei... [more]
SERK2_ARATH2.230e-3841.67Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK1_ARATH2.230e-3841.67Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionC31702H06EF StrClemenN Citrus clementina cDNA clone C31702H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923270 ID=FC923270; Name=FC923270; organism=Citrus clementina; type=EST; length=724bp
AGTTCCTCGAAAACTACAGGACCGTCAATCCCATCCGATATACTTACAAA
GAGCTGAAGAAAATAACAAGCAGATTTAAGCACAGGCTCGGCCAGGGAGG
TTACGGAAGCGTGTTCAGAGGAAAACTCTTCAACAGAATTCCAGTTGCTG
TCAAGATGTTGGAACATTTAAAAGGAAATGGACAAGAGTTCATCAATGAA
GTGGCCACAATTGGCAGGATTCACCACTTCCACATTGTTCGGCTTCTGGG
ATTTTGCTCTGAAGGAAACAGACGTGCTCTTATTTACGAGTTTATGCCCA
ACGGATCACTTGAGAAATTCATCTTCTCAAAGACAAATAGCTCAAGTCAT
CGTCCATTGAGTTGGGAGAAGCTGAGGAAGATTGCATTTGGCGTTGCCCG
TGGAGTGGAGTACTTGCACCAAGGATGCAACCAAAGGATCCTGCACTTCG
ATATCAAGCCTCACAATATATTATTAGACCATAATTTTCAACCGAAGATT
TCAGATTTTGGGCTGGCTAAGTTGTGCTCTAAGGACATAAGCATTGTATC
TCTGACAGCTGCCAGAGGCACTGCTGGCTACATTGCACCTGAACTTTTCT
CCAGGAATTTTGGTGAGGTCTCTTACAAGTCTGATGTTTACAGTTATGGA
ATGATGCTGTTAGAGATGGTCGGATGCAGAAAAATAATGATCCTGCGGTT
GAAATTCAAGCCAATATATTTTCC
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