FC923270

Overview
NameFC923270
Unique NameFC923270
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.446e-37
Identity = 90/223 (40.36%), Postives = 134/223 (60.09%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK--LCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIMIL 695
            R+TY ++ K+T+ F+  +G+GG+G V++G L N    A+K+L H    G +EF  EV  + R+HH  +V L+G+C + N  ALIYE M  G+L++ +  K   S    LSW    KIA   A G+EYLH GC  +I+H D+K  NILL   F+ KI+DFGL++  L   +      T   GT GY+ PE    +   +S KSDVYS+G++LLE++  + ++ L
Sbjct:  549 RFTYSDVNKMTNNFQVVIGKGGFGVVYQGCLNNE-QAAIKVLSHSSAQGYKEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCSV---LSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGNE---AQPTVVAGTFGYLDPEYHKTSL--LSMKSDVYSFGVVLLEIISGQDVIDL 762          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.446e-37
Identity = 89/199 (44.72%), Postives = 125/199 (62.81%), Query Frame = 3
Query:   78 KHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            K+ +G GG+G+V++  L     VAVK L   K  G +EF+ E+ T+G++ H ++V LLG+CS    + L+YE+M NGSL+ ++ ++T       L W K  KIA G ARG+ +LH G    I+H DIK  NILLD +F+PK++DFGLA+L S   S VS T   GT GYI PE         + K DVYS+G++LLE+V
Sbjct:  920 KNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLE--VLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVS-TVIAGTFGYIPPEY--GQSARATTKGDVYSFGVILLELV 1113          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.888e-37
Identity = 84/219 (38.36%), Postives = 134/219 (61.19%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIM 689
            R++Y ++  +T+ F+  LG+GG+G V+ G +     VAVK+L H    G ++F  EV  + R+HH ++V L+G+C EG+  ALIYE+M NG L++ +    N      L+W    KI    A+G+EYLH GC   ++H D+K  NILL+ +F+ K++DFGL++    +      T   GT GY+ PE    N+  ++ KSDVYS+G++LLE++  R ++
Sbjct:  567 RFSYSQVVIMTNNFQRILGKGGFGMVYHGFVNGTEQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFI---LNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNW--LTEKSDVYSFGILLLEIITNRHVI 780          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.466e-37
Identity = 87/218 (39.91%), Postives = 133/218 (61.01%), Query Frame = 3
Query:   39 YTYKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL-CSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 680
            + ++E+   T++F     LG GG+G V++G L +   VAVK        G  EF  E+  + ++ H H+V L+G+C E +   L+YE+M NG L   ++     +   PLSW++  +I  G ARG+ YLH G +Q I+H D+K  NILLD N   K++DFGL+K   S D + VS TA +G+ GY+ PE F R   +++ KSDVYS+G++L+E++ CR
Sbjct:  498 FMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYG----ADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVS-TAVKGSFGYLDPEYFRRQ--QLTEKSDVYSFGVVLMEVLCCR 708          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.221e-37
Identity = 85/213 (39.91%), Postives = 128/213 (60.09%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            ++TY E+ K+T+ F   +G+GG+G V  G +     VAVK+L      G +EF  EV  + R+HH ++V L+G+C EG+  ALIYEF+PNG L + +  K        ++W    +IA   A G+EYLH GC   ++H D+K  NILLD +++ K++DFGL++           T   GT GY+ PE +  +   +S KSDVYS+G++LLEM+
Sbjct:  569 KFTYSEVTKMTNNFGRVVGEGGFGVVCHGTVNGSEQVAVKLLSQSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGKGGKPI---VNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPEYY--HTSRLSEKSDVYSFGIVLLEMI 776          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.221e-37
Identity = 91/224 (40.62%), Postives = 130/224 (58.04%), Query Frame = 3
Query:   45 YKELKKITSRFKHR--LGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRP---LSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIMILRL 701
            + ELK+ T  F     +G+G YG V+ G L N +P A+K L+  K    EF+ +V+ + R+ H + V+LLG+C +GN R L YEF  NGSL   +  +      +P   LSW +  KIA G ARG+EYLH+  N  I+H DIK  N+LL  +   KI+DF L+       + +  T   GT GY APE      G+++ KSDVYS+G++LLE++  RK +  RL
Sbjct:   63 FSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSNKQPDNEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMT--GQLNAKSDVYSFGVVLLELLTGRKPVDHRL 284          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.206e-37
Identity = 81/214 (37.85%), Postives = 128/214 (59.81%), Query Frame = 3
Query:   39 YTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            +T++EL K T+ F   + +G GGYG V++G L N   +A+K  +     G  EF  E+  + R+HH ++V+LLGFC +   + L+YE++PNGSL   +  K        L W +  KIA G  +G+ YLH+  +  I+H D+K +NILLD +   K++DFGL+KL          T  +GT GY+ PE +  N  +++ KSDVY +G+++LE++
Sbjct:  622 FTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVK----LDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTN--QLTEKSDVYGFGVVMLELL 829          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.206e-37
Identity = 82/219 (37.44%), Postives = 134/219 (61.19%), Query Frame = 3
Query:   18 RTVNPIRYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            ++ N + +T+ ++ K+T+ F   LG+GG+G+V+ G  ++ + VAVK+L      G +EF +EV  + R+HH ++  L+G+  EG++  LIYEFM NG++   +  K   +    LSW +  +IA   A+G+EYLH GC   I+H D+K  NILL+   + K++DFGL++    +      T   GT GY+ P  F  N   ++ KSD+YS+G++LLEM+
Sbjct:  553 KSENKLLFTFADVIKMTNNFGQVLGKGGFGTVYHG-FYDNLQVAVKLLSETSAQGFKEFRSEVEVLVRVHHVNLTALIGYFHEGDQMGLIYEFMANGNMADHLAGKYQHT----LSWRQRLQIALDAAQGLEYLHCGCKPPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLVAGTPGYLDPLCFETN--GLNEKSDIYSFGVVLLEMI 764          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.206e-37
Identity = 91/222 (40.99%), Postives = 133/222 (59.91%), Query Frame = 3
Query:   39 YTYKELKKITSRF--KHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL-CSKDISIVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIM 689
            YTYKE++K T  F  K+ LG G YG+V+ G+  N   VA+K L+H       + +NE+  +  + H ++VRLLG C       L+YEFMPNG+L + +    +     PLSW+    IA   A  + +LH   N  I H DIK  NILLDH F  KISDFGL++L  S D     + TA +GT GY+ P+ + ++F ++S KSDVYS+G++L+E++   K++
Sbjct:  300 YTYKEIEKATDSFSDKNMLGTGAYGTVYAGEFPNSSCVAIKRLKHKDTTSIDQVVNEIKLLSSVSHPNLVRLLGCCFADGEPFLVYEFMPNGTLYQHL---QHERGQPPLSWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQ-YHQDF-QLSDKSDVYSFGVVLVEIISGFKVI 516          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.206e-37
Identity = 83/216 (38.43%), Postives = 133/216 (61.57%), Query Frame = 3
Query:   45 YKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            + +L + T+ F     +G GG+G VF+  L +   VA+K L  L   G +EF+ E+ T+G+I H ++V LLG+C  G  R L+YEFM  GSLE+ +         R L WE+ +KIA G A+G+ +LH  C   I+H D+K  N+LLD + + ++SDFG+A+L S   + +S++   GT GY+ PE + ++F   + K DVYS G+++LE++  ++
Sbjct:  828 FSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYY-QSF-RCTAKGDVYSIGVVMLEILSGKR 1041          
The following BLAST results are available for this feature:
BLAST of FC923270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1755_ARATH1.446e-3740.36Probable LRR receptor-like serine/threonine-protei... [more]
EXS_ARATH1.446e-3744.72Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y5182_ARATH1.888e-3738.36Probable LRR receptor-like serine/threonine-protei... [more]
THE1_ARATH2.466e-3739.91Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
Y5596_ARATH3.221e-3739.91Probable LRR receptor-like serine/threonine-protei... [more]
Y2706_ARATH3.221e-3740.63Probable receptor-like protein kinase At2g47060 OS... [more]
Y5977_ARATH4.206e-3737.85Probable leucine-rich repeat receptor-like protein... [more]
Y1570_ARATH4.206e-3737.44Probable LRR receptor-like serine/threonine-protei... [more]
WAKLR_ARATH4.206e-3740.99Wall-associated receptor kinase-like 21 OS=Arabido... [more]
BRL2_ARATH4.206e-3738.43Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC31702H06EF StrClemenN Citrus clementina cDNA clone C31702H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923270 ID=FC923270; Name=FC923270; organism=Citrus clementina; type=EST; length=724bp
AGTTCCTCGAAAACTACAGGACCGTCAATCCCATCCGATATACTTACAAA
GAGCTGAAGAAAATAACAAGCAGATTTAAGCACAGGCTCGGCCAGGGAGG
TTACGGAAGCGTGTTCAGAGGAAAACTCTTCAACAGAATTCCAGTTGCTG
TCAAGATGTTGGAACATTTAAAAGGAAATGGACAAGAGTTCATCAATGAA
GTGGCCACAATTGGCAGGATTCACCACTTCCACATTGTTCGGCTTCTGGG
ATTTTGCTCTGAAGGAAACAGACGTGCTCTTATTTACGAGTTTATGCCCA
ACGGATCACTTGAGAAATTCATCTTCTCAAAGACAAATAGCTCAAGTCAT
CGTCCATTGAGTTGGGAGAAGCTGAGGAAGATTGCATTTGGCGTTGCCCG
TGGAGTGGAGTACTTGCACCAAGGATGCAACCAAAGGATCCTGCACTTCG
ATATCAAGCCTCACAATATATTATTAGACCATAATTTTCAACCGAAGATT
TCAGATTTTGGGCTGGCTAAGTTGTGCTCTAAGGACATAAGCATTGTATC
TCTGACAGCTGCCAGAGGCACTGCTGGCTACATTGCACCTGAACTTTTCT
CCAGGAATTTTGGTGAGGTCTCTTACAAGTCTGATGTTTACAGTTATGGA
ATGATGCTGTTAGAGATGGTCGGATGCAGAAAAATAATGATCCTGCGGTT
GAAATTCAAGCCAATATATTTTCC
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