FC923273

Overview
NameFC923273
Unique NameFC923273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PP395_ARATH (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.411e-37
Identity = 79/216 (36.57%), Postives = 128/216 (59.26%), Query Frame = 2
Query:   71 REWSLQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYA-VDNWTLGILCYEFLYGAPPFEAESQKT 700
            R W +  +E+GR +G+  FG++    + ++  PVAL I+ K+++ K+K+  Q++RE+ I   + HPN+++LY       +I+++LE+   G+L+ +++   R  E +A  Y   L NA+ YCH   V HRD+KPENLLLD +  LK+ +FG    S+       RHT CG  DY APE++ ++ +D A  D W+ G++ +  L G  PFE  S  T
Sbjct:    7 RRW-VGKYEVGRLIGECNFGKLRSAVDTETGDPVALMILDKDKVLKHKMAEQIKREISIMKLINHPNVVQLYEVLASKAKIYIVLEFISGGKLFDKIKNDGRMNEDEAQRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAQENLKVAEFGLIALSQQAGGDGLRHTACGNPDYAAPEVLNDQGYDGAKADLWSCGVILFVLLAGYLPFEDSSLTT 221          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PLK4_CULQU (Serine/threonine-protein kinase PLK4 OS=Culex quinquefasciatus GN=SAK PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.411e-37
Identity = 83/210 (39.52%), Postives = 126/210 (60.00%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRR-FTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ-SR--SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKT 700
            ++DFE+   LGKG F  VY  +  ++   VA+K+I K+ ++   + +++R+E+ I S L+HP+IL LY +F D   ++L+LE A  GEL R LR  ++ F E +AAT +  +   L Y H + ++HRD+   NLLL  E  +KI DFG + Q SR   K  T+CGT +Y++PE+     H    D W LG + Y FL G PPF+ +  K+
Sbjct:    9 IEDFEVFELLGKGGFASVYRAKCCRTGILVAIKMIDKKLMQSSGMANRVRQEVSIHSRLKHPSILELYTFFEDANFVYLVLELAENGELQRYLRDTKKTFNEYEAATVLKQVVEGLLYLHSHQILHRDMSLANLLLTKEMTVKICDFGLATQLSRPDEKHMTLCGTPNYISPEVASRASHGLPADVWGLGCMLYTFLVGRPPFDTDGVKS 218          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KS6A1_CAEEL (Putative ribosomal protein S6 kinase alpha-1 OS=Caenorhabditis elegans GN=rskn-1 PE=1 SV=4)

HSP 1 Score: 156.377 bits (394), Expect = 1.411e-37
Identity = 80/224 (35.71%), Postives = 136/224 (60.71%), Query Frame = 2
Query:   41 KTAEREDNRKREWSLQDFEIGRPLGKGKFGRVYLVREVKSK---YPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS---VQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ 694
            K  E+ D R+       FE+ + LG+G FG+V+LVR+V+ +   +  A+K++ K  + K + + + + E  I + + HP I++L+  F  + +++LIL++   G+L+  L K   FTE     Y+A LT AL + H   +++RD+KPEN+LLD +G +K+ DFG S   + S  K ++ CGT++Y+APE++  + H  A D W+LG+L +E L G  PF+   +
Sbjct:   94 KCGEKADPRQ-------FELLKVLGQGSFGKVFLVRKVRGRDSGHVYAMKVLKKATL-KVRDRQRTKLERNILAHISHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEDDVKFYLAELTLALEHLHSLGIVYRDLKPENILLDADGHIKVTDFGLSKEAIDSEKKTYSFCGTVEYMAPEVINRRGHSMAADFWSLGVLMFEMLTGHLPFQGRDR 309          

HSP 2 Score: 93.9745 bits (232), Expect = 8.601e-19
Identity = 62/208 (29.81%), Postives = 106/208 (50.96%), Query Frame = 2
Query:   89 DFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPN---ILRLYGWFHDDERIFLILEYAHRGELYREL-RKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLL----DHEGRLKIGDFGWSVQSRSKRH---TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPF 679
            D+EI   +G G    V+  +   ++   A+KI+ K   +  +         E+   LRH +   +++L+  + D+  I++I E    GEL  +L  K    +E++ A  +A+L NA+ Y H   V HRD+   N+L          L+I DFG++ QSR++     T C T  ++APE++  + +D + D W+LG+L +  L G  PF
Sbjct:  453 DYEILEKIGNGAHSVVHKCQMKATRRKYAVKIVKKAVFDATE---------EVDILLRHSHHQFVVKLFDVYEDETAIYMIEELCEGGELLDKLVNKKSLGSEKEVAAIMANLLNAVQYLHSQQVAHRDLTAANILFALKDGDPSSLRIVDFGFAKQSRAENGMLMTPCYTAQFVAPEVLRKQGYDRSCDVWSLGVLLHTMLTGCTPF 651          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KAPCA_BOVIN (cAMP-dependent protein kinase catalytic subunit alpha OS=Bos taurus GN=PRKACA PE=1 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 1.411e-37
Identity = 79/203 (38.92%), Postives = 128/203 (63.05%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYK-IQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE 688
            L  FE  + LG G FGRV LV+ +++    A+KI+ K+++ K K I+H L  E  I  ++  P +++L   F D+  +++++EY   GE++  LR+  RF+E  A  Y A +     Y H   +I+RD+KPENLL+D +G +++ DFG++ + + +  T+CGT +YLAPE++ +K ++ AVD W LG+L YE   G PPF A+
Sbjct:   41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPKL_ORYSJ (CBL-interacting protein kinase 21 OS=Oryza sativa subsp. japonica GN=CIPK21 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.411e-37
Identity = 75/206 (36.41%), Postives = 131/206 (63.59%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAV-DNWTLGILCYEFLYGAPPFEAES 691
            +E+GR LG+G FG+V L R   +    A+KI+ +++I   KI  Q++RE+     L+HPN++RL+       +I+++LEY + GEL+ ++    + +E++       L +A++YCHE  V HRD+KPEN+L+D +G +K+ DFG S   +++R     HT CG+ +Y+APE++ N+ +D ++ D W+ G++ Y  L G  PF+ ++
Sbjct:   87 YEMGRALGEGHFGKVKLARHADTGAAFAIKILDRQRILAMKIDEQIKREIATLKLLKHPNVVRLHEVSASKTKIYMVLEYVNGGELFDKIALKGKLSEKEGRKLFQQLMDAVSYCHEKGVYHRDLKPENVLVDAKGNIKVSDFGLSALPQNQRKDGLLHTTCGSPNYIAPEVLLNRGYDGSLSDIWSCGVILYVMLTGNLPFDDQN 292          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: NUAK1_HUMAN (NUAK family SNF1-like kinase 1 OS=Homo sapiens GN=NUAK1 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.843e-37
Identity = 81/205 (39.51%), Postives = 124/205 (60.49%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS--VQSRSKRHTMCGTLDYLAPEMVENKEH-DYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            +E+   LGKG +G+V    E  S   VA+K I K++I+  +    +RRE+EI SSL HP+I+ +Y  F + ++I +I+EYA +GELY  + + RR +E++   +   + +A+ YCH+N V+HRD+K EN+LLD    +KI DFG S   Q      T CG+  Y +PE+V  + +    VD+W LG+L Y  +YG  PF+    K
Sbjct:   55 YELQETLGKGTYGKVKRATERFSGRVVAIKSIRKDKIKDEQDMVHIRREIEIMSSLNHPHIISIYEVFENKDKIVIIMEYASKGELYDYISERRRLSERETRHFFRQIVSAVHYCHKNGVVHRDLKLENILLDDNCNIKIADFGLSNLYQKDKFLQTFCGSPLYASPEIVNGRPYRGPEVDSWALGVLLYTLVYGTMPFDGFDHK 259          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KS6B1_RAT (Ribosomal protein S6 kinase beta-1 OS=Rattus norvegicus GN=Rps6kb1 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.843e-37
Identity = 82/209 (39.23%), Postives = 127/209 (60.77%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYP---VALKIIFKEQIEKY-KIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGW---SVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            FE+ R LGKG +G+V+ VR+V         A+K++ K  I +  K     + E  I   ++HP I+ L   F    +++LILEY   GEL+ +L +   F E  A  Y+A ++ AL + H+  +I+RD+KPEN++L+H+G +K+ DFG    S+   +  HT CGT++Y+APE++    H+ AVD W+LG L Y+ L GAPPF  E++K
Sbjct:   91 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 299          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KS6B1_RABIT (Ribosomal protein S6 kinase beta-1 OS=Oryctolagus cuniculus GN=RPS6KB1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.843e-37
Identity = 82/209 (39.23%), Postives = 127/209 (60.77%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYP---VALKIIFKEQIEKY-KIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGW---SVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            FE+ R LGKG +G+V+ VR+V         A+K++ K  I +  K     + E  I   ++HP I+ L   F    +++LILEY   GEL+ +L +   F E  A  Y+A ++ AL + H+  +I+RD+KPEN++L+H+G +K+ DFG    S+   +  HT CGT++Y+APE++    H+ AVD W+LG L Y+ L GAPPF  E++K
Sbjct:   91 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 299          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KS6B1_MOUSE (Ribosomal protein S6 kinase beta-1 OS=Mus musculus GN=Rps6kb1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.843e-37
Identity = 82/209 (39.23%), Postives = 127/209 (60.77%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYP---VALKIIFKEQIEKY-KIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGW---SVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            FE+ R LGKG +G+V+ VR+V         A+K++ K  I +  K     + E  I   ++HP I+ L   F    +++LILEY   GEL+ +L +   F E  A  Y+A ++ AL + H+  +I+RD+KPEN++L+H+G +K+ DFG    S+   +  HT CGT++Y+APE++    H+ AVD W+LG L Y+ L GAPPF  E++K
Sbjct:   91 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 299          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KS6B1_HUMAN (Ribosomal protein S6 kinase beta-1 OS=Homo sapiens GN=RPS6KB1 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.843e-37
Identity = 82/209 (39.23%), Postives = 127/209 (60.77%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYP---VALKIIFKEQIEKY-KIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGW---SVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            FE+ R LGKG +G+V+ VR+V         A+K++ K  I +  K     + E  I   ++HP I+ L   F    +++LILEY   GEL+ +L +   F E  A  Y+A ++ AL + H+  +I+RD+KPEN++L+H+G +K+ DFG    S+   +  HT CGT++Y+APE++    H+ AVD W+LG L Y+ L GAPPF  E++K
Sbjct:   91 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 299          
The following BLAST results are available for this feature:
BLAST of FC923273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PP395_ARATH1.411e-3736.57Pentatricopeptide repeat-containing protein At5g21... [more]
PLK4_CULQU1.411e-3739.52Serine/threonine-protein kinase PLK4 OS=Culex quin... [more]
KS6A1_CAEEL1.411e-3735.71Putative ribosomal protein S6 kinase alpha-1 OS=Ca... [more]
KAPCA_BOVIN1.411e-3738.92cAMP-dependent protein kinase catalytic subunit al... [more]
CIPKL_ORYSJ1.411e-3736.41CBL-interacting protein kinase 21 OS=Oryza sativa ... [more]
NUAK1_HUMAN1.843e-3739.51NUAK family SNF1-like kinase 1 OS=Homo sapiens GN=... [more]
KS6B1_RAT1.843e-3739.23Ribosomal protein S6 kinase beta-1 OS=Rattus norve... [more]
KS6B1_RABIT1.843e-3739.23Ribosomal protein S6 kinase beta-1 OS=Oryctolagus ... [more]
KS6B1_MOUSE1.843e-3739.23Ribosomal protein S6 kinase beta-1 OS=Mus musculus... [more]
KS6B1_HUMAN1.843e-3739.23Ribosomal protein S6 kinase beta-1 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionC31702H10EF StrClemenN Citrus clementina cDNA clone C31702H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923273 ID=FC923273; Name=FC923273; organism=Citrus clementina; type=EST; length=712bp
GGACCTGATCTGGAATAAGCAGGTGTCCCGAATGGATACCAAAACAGCAG
AACGAGAAGATAATCGTAAGAGAGAATGGTCCTTACAAGACTTCGAGATT
GGGAGACCTCTCGGCAAGGGCAAATTCGGCCGCGTCTATCTCGTCCGAGA
AGTCAAGAGCAAATATCCAGTGGCATTGAAGATTATATTCAAGGAGCAAA
TTGAGAAGTACAAAATTCAACATCAATTGAGGAGGGAAATGGAAATTCAA
TCGAGTCTACGTCACCCTAATATACTGCGTCTCTACGGTTGGTTTCATGA
TGATGAACGTATTTTCTTGATTCTCGAGTACGCTCATCGCGGTGAGCTTT
ACAGGGAGCTCAGGAAGCACCGTCGTTTTACCGAACAGCAAGCCGCCACG
TACATTGCGAGTCTTACTAATGCGTTGGCTTACTGTCACGAGAATCACGT
GATTCATAGAGATATTAAGCCTGAAAATCTGTTGCTTGATCATGAGGGTC
GATTGAAAATTGGTGATTTTGGATGGTCGGTACAGTCAAGAAGCAAGAGA
CATACTATGTGTGGGACATTAGATTACTTGGCCCCTGAAATGGTGGAAAA
CAAAGAACATGATTATGCTGTAGATAACTGGACGTTGGGTATTCTTTGCT
ATGAGTTCCTCTATGGTGCTCCTCCATTTGAGGCAGAGAGTCAAAAGACA
CGTTCAGAAGGA
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