FC923273

Overview
NameFC923273
Unique NameFC923273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPK9_ARATH (CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.144e-37
Identity = 76/210 (36.19%), Postives = 125/210 (59.52%), Query Frame = 2
Query:   89 DFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHD-YAVDNWTLGILCYEFLYGAPPFEAESQKT 700
            ++E+GR LG+G F +V   +   +    A+KI+ +E++ ++K+  QL+RE+     ++HPN++ +        +I+++LE  + GEL+ ++ +  R  E +A  Y   L NA+ YCH   V HRD+KPENL+LD  G LK+ DFG S  SR  R     HT CGT +Y+APE++ +K +D  A D W+ G++ +  + G  PF+  +  T
Sbjct:   18 NYEMGRTLGEGSFAKVKYAKNTVTGDQAAIKILDREKVFRHKMVEQLKREISTMKLIKHPNVVEIIEVMASKTKIYIVLELVNGGELFDKIAQQGRLKEDEARRYFQQLINAVDYCHSRGVYHRDLKPENLILDANGVLKVSDFGLSAFSRQVREDGLLHTACGTPNYVAPEVLSDKGYDGAAADVWSCGVILFVLMAGYLPFDEPNLMT 227          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KGP2_MOUSE (cGMP-dependent protein kinase 2 OS=Mus musculus GN=Prkg2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.106e-37
Identity = 87/205 (42.44%), Postives = 120/205 (58.54%), Query Frame = 2
Query:   86 QDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS--VQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ 694
            Q+ EI   LG G FGRV LV+        A+K I K+ I   K Q  +  E  I   L  P I++LY  F D++ ++++LE    GEL+  LR    F E  +   +A +T A  Y H   +I+RD+KPENL+LD +G LK+ DFG++  + S  K  T CGT +Y+APE++ NK HD++VD W+LGIL YE L G PPF    Q
Sbjct:  451 QNLEIIATLGVGGFGRVELVKVKNENVAFAMKCIRKKHIVDTKQQEHVYSEKRILEELCSPFIVKLYRTFKDNKYVYMLLEACLGGELWSILRDRGSFDEPTSKFCVACVTEAFDYLHLLGIIYRDLKPENLILDADGYLKLVDFGFAKKIGSGQKTWTFCGTPEYVAPEVILNKGHDFSVDFWSLGILVYELLTGNPPFSGIDQ 655          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PLK4_PONAB (Serine/threonine-protein kinase PLK4 OS=Pongo abelii GN=PLK4 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37
Identity = 73/209 (34.93%), Postives = 122/209 (58.37%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            ++DF++G  LGKG F  VY    + +   VA+K+I K+ + K  +  +++ E++I   L+HP+IL LY +F D   ++L+LE  H GE+ R L+   + F+E +A  ++  +   + Y H + ++HRD+   NLLL     +KI DFG + Q +    K +T+CGT +Y++PE+     H    D W+LG + Y  L G PPF+ ++ K
Sbjct:    9 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK 217          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PLK4_HUMAN (Serine/threonine-protein kinase PLK4 OS=Homo sapiens GN=PLK4 PE=1 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37
Identity = 73/209 (34.93%), Postives = 122/209 (58.37%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            ++DF++G  LGKG F  VY    + +   VA+K+I K+ + K  +  +++ E++I   L+HP+IL LY +F D   ++L+LE  H GE+ R L+   + F+E +A  ++  +   + Y H + ++HRD+   NLLL     +KI DFG + Q +    K +T+CGT +Y++PE+     H    D W+LG + Y  L G PPF+ ++ K
Sbjct:    9 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK 217          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: NUAK2_RAT (NUAK family SNF1-like kinase 2 OS=Rattus norvegicus GN=Nuak2 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37
Identity = 81/206 (39.32%), Postives = 127/206 (61.65%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS-VQSRSK-RHTMCGTLDYLAPEMVENKEH-DYAVDNWTLGILCYEFLYGAPPFEAESQKT 700
            +E    LGKG +G+V   RE   +  VA+K I K++I+  +    +RRE+EI SSL HP+I+ ++  F +  +I +++EYA RG+LY  + +  R  E+ A  +   + +AL YCH+N ++HRD+K EN+LLD  G +KI DFG S +  + K   T CG+  Y +PE+V  K +    VD+W+LG+L Y  ++G  PF+ +  KT
Sbjct:   57 YEFLETLGKGTYGKVKKARESSGRL-VAIKSIRKDKIKDEQDLLHIRREIEIMSSLNHPHIIAIHEVFENSSKIVIVMEYASRGDLYDYISERPRLNERDARHFFRQIVSALHYCHQNGIVHRDLKLENILLDASGNIKIADFGLSNLYHKGKFLQTFCGSPLYASPEIVNGKPYVGPEVDSWSLGVLLYILVHGTMPFDGQDHKT 261          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37
Identity = 81/209 (38.76%), Postives = 123/209 (58.85%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYA-VDNWTLGILCYEFLYGAPPFEAES 691
            ++ +E+GR LG+G F +VY  R +K+   VA+K+I K+++ K  +  Q++RE+ +   +RHP+++ L+       +I+  +EY   GEL+ ++ K  +  E  A  Y   L  A+ YCH   V HRD+KPENLLLD  G LKI DFG S    SK+     HT CGT  Y+APE++  K +D A  D W+ G++ Y  L G  PF  ++
Sbjct:    9 MRKYELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHPHVVFLHEVMASKTKIYFAMEYVKGGELFDKVSK-GKLKENIARKYFQQLIGAIDYCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALRESKQQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADVWSCGVVLYVLLAGFLPFHEQN 216          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPK9_ORYSJ (CBL-interacting protein kinase 9 OS=Oryza sativa subsp. japonica GN=CIPK9 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37
Identity = 72/203 (35.47%), Postives = 124/203 (61.08%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHD-YAVDNWTLGILCYEFLYGAPPFE 682
            +E+G+ +G+G F +V + R+ ++   +A+K++ +  + ++K+  Q++RE+     ++HPN+++L+       +I+++LEY   GEL+ ++    R  E +A  Y   L NA+ YCH   V HRD+KPENLLLD  G LK+ DFG S  +   +     HT CGT +Y+APE++ +K +D  A D W+ GI+ +  + G  PF+
Sbjct:   27 YELGKTIGEGSFAKVKVARDTRTGDTLAIKVLDRNHVLRHKMVEQIKREISTMKLIKHPNVVQLHEVMASKSKIYMVLEYVDGGELFDKIVNSGRLGEDEARRYFHQLINAVDYCHSRGVYHRDLKPENLLLDSHGALKVSDFGLSAFAPQTKEDGLLHTACGTPNYVAPEVLADKGYDGMAADVWSCGIILFVLMAGYLPFD 229          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CCR1_MAIZE (Probable serine/threonine-protein kinase CCRP1 OS=Zea mays GN=CCRP1 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37
Identity = 83/212 (39.15%), Postives = 122/212 (57.55%), Query Frame = 2
Query:   74 EWSLQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ---SRSKRHTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            E +++ +  GR LGKG F + Y V  +++K  +A KII K  + K + + +L  E++I  SLRH NI+     F D E ++++LE      L+  +++ +R TE +   Y   L   L Y H   VIHRD+K  NLLL+ +  LKI DFG + +      KR T+CGT +Y+APE++E K  H Y VD W+LG++ Y  L G PPFE    K
Sbjct:   30 EPTIRKYSKGRMLGKGGFAKCYEVTNLENKKVLAGKIICKASLTKSRAKQKLISEIKIHKSLRHSNIVEFEHVFEDQENVYILLELCPNQSLHDLIKRRKRLTEIEVQCYTLQLICGLKYLHSRRVIHRDLKLGNLLLNDKMELKICDFGLAAKLEFDGEKRKTVCGTPNYIAPEVIEGKGGHSYEVDTWSLGVIIYTLLVGRPPFETSDVK 241          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PLK4_RAT (Serine/threonine-protein kinase PLK4 OS=Rattus norvegicus GN=Plk4 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.004e-37
Identity = 71/209 (33.97%), Postives = 123/209 (58.85%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRR-FTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            ++DF++G  LGKG F  VY    + +   VA+K+I K+ + K  +  +++ E++I   L+HP++L LY +F D+  ++L+LE  H GE+ R L+   + F+E +A  ++  +   + Y H + ++HRD+   N+LL     +KI DFG + Q +    K +T+CGT +Y++PE+     H    D W+LG + Y  L G PPF+ ++ K
Sbjct:    9 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSVLELYNYFEDNNYVYLVLEMCHNGEMNRYLKNRMKPFSESEARHFMHQIITGMLYLHSHGILHRDLTLSNILLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDIWSLGCMFYTLLIGRPPFDTDTVK 217          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PLK4_MOUSE (Serine/threonine-protein kinase PLK4 OS=Mus musculus GN=Plk4 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.004e-37
Identity = 71/209 (33.97%), Postives = 123/209 (58.85%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRR-FTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ---SRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            ++DF++G  LGKG F  VY    + +   VA+K+I K+ + K  +  +++ E++I   L+HP++L LY +F D+  ++L+LE  H GE+ R L+   + F+E++A  ++  +   + Y H + ++HRD+   N+LL     +KI DFG + Q      K +T+CGT +Y++PE+     H    D W+LG + Y  L G PPF+ ++ K
Sbjct:    9 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSVLELYNYFEDNNYVYLVLEMCHNGEMNRYLKNRMKPFSEREARHFMHQIITGMLYLHSHGILHRDLTLSNILLTRNMNIKIADFGLATQLNMPHEKHYTLCGTPNYISPEIATRSAHGLESDIWSLGCMFYTLLIGRPPFDTDTVK 217          
The following BLAST results are available for this feature:
BLAST of FC923273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CIPK9_ARATH3.144e-3736.19CBL-interacting serine/threonine-protein kinase 9 ... [more]
KGP2_MOUSE4.106e-3742.44cGMP-dependent protein kinase 2 OS=Mus musculus GN... [more]
PLK4_PONAB5.363e-3734.93Serine/threonine-protein kinase PLK4 OS=Pongo abel... [more]
PLK4_HUMAN5.363e-3734.93Serine/threonine-protein kinase PLK4 OS=Homo sapie... [more]
NUAK2_RAT5.363e-3739.32NUAK family SNF1-like kinase 2 OS=Rattus norvegicu... [more]
CIPKK_ARATH5.363e-3738.76CBL-interacting serine/threonine-protein kinase 20... [more]
CIPK9_ORYSJ5.363e-3735.47CBL-interacting protein kinase 9 OS=Oryza sativa s... [more]
CCR1_MAIZE5.363e-3739.15Probable serine/threonine-protein kinase CCRP1 OS=... [more]
PLK4_RAT7.004e-3733.97Serine/threonine-protein kinase PLK4 OS=Rattus nor... [more]
PLK4_MOUSE7.004e-3733.97Serine/threonine-protein kinase PLK4 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionC31702H10EF StrClemenN Citrus clementina cDNA clone C31702H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923273 ID=FC923273; Name=FC923273; organism=Citrus clementina; type=EST; length=712bp
GGACCTGATCTGGAATAAGCAGGTGTCCCGAATGGATACCAAAACAGCAG
AACGAGAAGATAATCGTAAGAGAGAATGGTCCTTACAAGACTTCGAGATT
GGGAGACCTCTCGGCAAGGGCAAATTCGGCCGCGTCTATCTCGTCCGAGA
AGTCAAGAGCAAATATCCAGTGGCATTGAAGATTATATTCAAGGAGCAAA
TTGAGAAGTACAAAATTCAACATCAATTGAGGAGGGAAATGGAAATTCAA
TCGAGTCTACGTCACCCTAATATACTGCGTCTCTACGGTTGGTTTCATGA
TGATGAACGTATTTTCTTGATTCTCGAGTACGCTCATCGCGGTGAGCTTT
ACAGGGAGCTCAGGAAGCACCGTCGTTTTACCGAACAGCAAGCCGCCACG
TACATTGCGAGTCTTACTAATGCGTTGGCTTACTGTCACGAGAATCACGT
GATTCATAGAGATATTAAGCCTGAAAATCTGTTGCTTGATCATGAGGGTC
GATTGAAAATTGGTGATTTTGGATGGTCGGTACAGTCAAGAAGCAAGAGA
CATACTATGTGTGGGACATTAGATTACTTGGCCCCTGAAATGGTGGAAAA
CAAAGAACATGATTATGCTGTAGATAACTGGACGTTGGGTATTCTTTGCT
ATGAGTTCCTCTATGGTGCTCCTCCATTTGAGGCAGAGAGTCAAAAGACA
CGTTCAGAAGGA
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