FC923273

Overview
NameFC923273
Unique NameFC923273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PLK4_DROAN (Serine/threonine-protein kinase PLK4 OS=Drosophila ananassae GN=SAK PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 86/217 (39.63%), Postives = 136/217 (62.67%), Query Frame = 2
Query:   62 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR--SKRH-TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKT 700
            NR    +++++E+   LGKG F  VY  R + +   VA+K+I K+ I+   + +++R+E+EI S L+HP++L+LY +F D   ++L+LE AH GEL+R +    R FTE +AA+ +  +   L Y H ++++HRDI   NLLL  E  +KI DFG + Q +   +RH TMCGT +Y++PE+V    H    D W++G + Y  L G PPFE ++ +T
Sbjct:    4 NRAFGETIEEYEVQHLLGKGGFASVYKARCLHTHQDVAIKMIDKKLIQGTGLTNRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLVLELAHNGELHRYMNHIGRPFTEAEAASILRQVVAGLLYLHSHNIMHRDISLSNLLLSKEMHVKIADFGLATQLKRPDERHVTMCGTPNYISPEVVSRTSHGLPADVWSVGCMLYTLLVGRPPFETDAVQT 220          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PLK4_DROYA (Serine/threonine-protein kinase PLK4 OS=Drosophila yakuba GN=SAK PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.044e-40
Identity = 86/214 (40.19%), Postives = 134/214 (62.62%), Query Frame = 2
Query:   62 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR--SKRH-TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES 691
            NR    +++D+E+   LGKG F  VY  R + +   VA+K+I K+ I+   + +++R+E+EI S L+HP++L+LY +F D   ++L+LE AH GEL+R +    R FTE +AA+ +  +   L Y H ++++HRDI   NLLL  E  +KI DFG + Q +   +RH TMCGT +Y++PE+V    H    D W++G + Y  L G PPFE ++
Sbjct:    4 NRAFGETIEDYEVQHLLGKGGFAIVYKARCLHTHQDVAIKMIDKKLIQGTGLTNRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLVLELAHNGELHRYMNHIARPFTETEAASILKQVVAGLLYLHSHNIMHRDISLSNLLLSKEMHVKIADFGLATQLKRPDERHMTMCGTPNYISPEVVSRSSHGLPADVWSVGCMLYTLLVGRPPFETDA 217          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PLK4_DROER (Serine/threonine-protein kinase PLK4 OS=Drosophila erecta GN=SAK PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.044e-40
Identity = 86/214 (40.19%), Postives = 134/214 (62.62%), Query Frame = 2
Query:   62 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR--SKRH-TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES 691
            NR    +++D+E+   LGKG F  VY  R + +   VA+K+I K+ I+   + +++R+E+EI S L+HP++L+LY +F D   ++L+LE AH GEL+R +    R FTE +AA+ +  +   L Y H ++++HRDI   NLLL  E  +KI DFG + Q +   +RH TMCGT +Y++PE+V    H    D W++G + Y  L G PPFE ++
Sbjct:    4 NRAFGETIEDYEVQHLLGKGGFAIVYKARCLHTHQDVAIKMIDKKLIQGTGLTNRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLVLELAHNGELHRYMNHIARPFTETEAASILKQVVAGLLYLHSHNIMHRDISLSNLLLSKEMHVKIADFGLATQLKRPDERHMTMCGTPNYISPEVVSRSSHGLPADVWSVGCMLYTLLVGRPPFETDA 217          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPKB_ORYSJ (CBL-interacting protein kinase 11 OS=Oryza sativa subsp. japonica GN=CIPK11 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40
Identity = 81/202 (40.10%), Postives = 123/202 (60.89%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYA-VDNWTLGILCYEFLYGAPPF 679
            +E+G+ LG+G F +VY  R + +   VA+K+I K+++ K  +  Q++RE+ I   ++HPN+L+L+       +I+ +LEYA  GEL+ ++ K  + +E  A  Y   L NA+ YCH   V HRD+KPENLLLD    LK+ DFG S  + SKR     HT CGT  Y+APE++  K +D A  D W+ G++ +  + G  PF
Sbjct:   12 YEVGKQLGQGTFAKVYYARNLTTGQAVAIKMINKDKVMKVGLMEQIKREISIMRLVKHPNVLQLFEVMASKSKIYFVLEYAKGGELFNKIAKEGKLSEDSARRYFHQLINAVDYCHSRGVYHRDLKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVLSRKGYDGAKADVWSCGVILFVLVAGYLPF 213          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPK8_ORYSJ (CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica GN=CIPK8 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40
Identity = 80/201 (39.80%), Postives = 125/201 (62.19%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFG---WSVQSRSKRHTMCGTLDYLAPEMVENKEHDYAV-DNWTLGILCYEFLYGAPPFE 682
            +E+GR +G+G F +V   +  +S   VA+K++ +  I K+K+  Q++RE+ I   +RHPN++RL+      ++IF+ILE+   GEL+ ++ +H R  E  A  Y   L + + +CH   V HRD+KPENLLLD +G LKI DFG   W  Q  +   T CGT +Y+APE++ +K +D A+ D W+ G++ Y  L G  PF+
Sbjct:   13 YEVGRTIGEGTFAKVKFAQNTESGESVAMKVVDRSSILKHKMADQIKREISIMKLVRHPNVVRLHEVLASRKKIFIILEFITGGELFDKIIRHGRLNEADARRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSAWPAQGGALLRTTCGTPNYVAPEVLSHKGYDGALADTWSCGVILYVLLAGYLPFD 213          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PLK4_DROVI (Serine/threonine-protein kinase PLK4 OS=Drosophila virilis GN=SAK PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.038e-40
Identity = 82/209 (39.23%), Postives = 136/209 (65.07%), Query Frame = 2
Query:   80 SLQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR--SKRH-TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES 691
            ++ ++E+   LGKG F  VY  + ++S   VA+K+I K+ I+   + +++R+E+EI S L+HP++L+LY +F D   ++LILE A  GEL+R + +   R FTEQ+AA+ +  + + L Y H ++++HRDI   NLLL  +  +KI DFG + Q +   +RH TMCGT +Y++PE+V ++ H    D W++G + Y  L G PPF+ ++
Sbjct:   10 TIDEYEVQHLLGKGGFACVYKAKCLRSHQNVAIKMIDKKLIQGSGLSNRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLILELADNGELHRYMNQQMKRPFTEQEAASILRQVVDGLLYLHSHNIMHRDISMSNLLLSKDMHVKIADFGLATQLKRPDERHMTMCGTPNYISPEVVSHQSHGLPADLWSVGCMLYTLLVGRPPFDTDA 218          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPKA_ORYSJ (CBL-interacting protein kinase 10 OS=Oryza sativa subsp. japonica GN=CIPK10 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.038e-40
Identity = 87/206 (42.23%), Postives = 126/206 (61.17%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYA-VDNWTLGILCYEFLYGAPPFE 682
            ++ +EIG+ LG+G F +VY  R +K+   VA+K+I KE+I K ++  Q+RRE+ + + +RHP I++LY       +I+ ILEY   GEL+ ++R+  R  E+ A  Y   L +A+ +CH   V HRD+KPENLLLD    LKI DFG S  +  KR     HT CGT  Y+APE++  K +D A  D W  G++ Y  L G  PF+
Sbjct:   10 MKRYEIGKLLGQGSFAKVYHGRNIKNSQSVAIKVIDKEKILKCELMDQIRREISVMNLVRHPCIVQLYEVMATKTKIYFILEYVKGGELFNKVRR-GRLKEEVARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENRNLKISDFGLSALAECKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADVWACGVILYVLLAGYLPFQ 214          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 81/203 (39.90%), Postives = 124/203 (61.08%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYA-VDNWTLGILCYEFLYGAPPFE 682
            +E+GR LG+G F +V   R V++   VA+K+I KE++ K K+  Q++RE+     ++HPN++R++       +I+ +LE+   GEL+ ++  + R  E +A  Y   L NA+ YCH   V HRD+KPENLLLD  G LK+ DFG S   +  R     HT CGT +Y+APE++ NK +D A  D W+ G++ +  + G  PFE
Sbjct:   31 YELGRTLGEGTFAKVKFARNVENGDNVAIKVIDKEKVLKNKMIAQIKREISTMKLIKHPNVIRMFEVMASKTKIYFVLEFVTGGELFDKISSNGRLKEDEARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDANGALKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILFVLMAGYLPFE 233          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KAPCB_RAT (cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus GN=Prkacb PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 6.768e-40
Identity = 85/223 (38.12%), Postives = 138/223 (61.88%), Query Frame = 2
Query:   47 AEREDNRKREWS--------LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYK-IQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE 688
            A+ +++  R+W         L+DFE  + LG G FGRV LV+   ++   A+KI+ K+++ K K I+H L  E  I  ++  P ++RL   F D+  +++++EY   GE++  LR+  RF+E  A  Y A +     Y H   +I+RD+KPENLL+DH+G +++ DFG++ + + +  T+CGT +YLAPE++ +K ++ AVD W LG+L YE   G PPF A+
Sbjct:   21 AKAKEDFLRKWENPPPSNAGLEDFERKKTLGTGSFGRVMLVKHKATEQYYAMKILDKQKVVKLKQIEHTLN-EKRILQAVEFPFLVRLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDHQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KAPCB_MOUSE (cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus GN=Prkacb PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 6.768e-40
Identity = 85/223 (38.12%), Postives = 138/223 (61.88%), Query Frame = 2
Query:   47 AEREDNRKREWS--------LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYK-IQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE 688
            A+ +++  R+W         L+DFE  + LG G FGRV LV+   ++   A+KI+ K+++ K K I+H L  E  I  ++  P ++RL   F D+  +++++EY   GE++  LR+  RF+E  A  Y A +     Y H   +I+RD+KPENLL+DH+G +++ DFG++ + + +  T+CGT +YLAPE++ +K ++ AVD W LG+L YE   G PPF A+
Sbjct:   21 AKAKEDFLRKWENPPPSNAGLEDFERKKTLGTGSFGRVMLVKHKATEQYYAMKILDKQKVVKLKQIEHTLN-EKRILQAVEFPFLVRLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDHQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242          
The following BLAST results are available for this feature:
BLAST of FC923273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PLK4_DROAN7.995e-4139.63Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PLK4_DROYA1.044e-4040.19Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PLK4_DROER1.044e-4040.19Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
CIPKB_ORYSJ1.364e-4040.10CBL-interacting protein kinase 11 OS=Oryza sativa ... [more]
CIPK8_ORYSJ1.364e-4039.80CBL-interacting protein kinase 8 OS=Oryza sativa s... [more]
PLK4_DROVI3.038e-4039.23Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
CIPKA_ORYSJ3.038e-4042.23CBL-interacting protein kinase 10 OS=Oryza sativa ... [more]
CIPKN_ARATH5.182e-4039.90CBL-interacting serine/threonine-protein kinase 23... [more]
KAPCB_RAT6.768e-4038.12cAMP-dependent protein kinase catalytic subunit be... [more]
KAPCB_MOUSE6.768e-4038.12cAMP-dependent protein kinase catalytic subunit be... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31702H10EF StrClemenN Citrus clementina cDNA clone C31702H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923273 ID=FC923273; Name=FC923273; organism=Citrus clementina; type=EST; length=712bp
GGACCTGATCTGGAATAAGCAGGTGTCCCGAATGGATACCAAAACAGCAG
AACGAGAAGATAATCGTAAGAGAGAATGGTCCTTACAAGACTTCGAGATT
GGGAGACCTCTCGGCAAGGGCAAATTCGGCCGCGTCTATCTCGTCCGAGA
AGTCAAGAGCAAATATCCAGTGGCATTGAAGATTATATTCAAGGAGCAAA
TTGAGAAGTACAAAATTCAACATCAATTGAGGAGGGAAATGGAAATTCAA
TCGAGTCTACGTCACCCTAATATACTGCGTCTCTACGGTTGGTTTCATGA
TGATGAACGTATTTTCTTGATTCTCGAGTACGCTCATCGCGGTGAGCTTT
ACAGGGAGCTCAGGAAGCACCGTCGTTTTACCGAACAGCAAGCCGCCACG
TACATTGCGAGTCTTACTAATGCGTTGGCTTACTGTCACGAGAATCACGT
GATTCATAGAGATATTAAGCCTGAAAATCTGTTGCTTGATCATGAGGGTC
GATTGAAAATTGGTGATTTTGGATGGTCGGTACAGTCAAGAAGCAAGAGA
CATACTATGTGTGGGACATTAGATTACTTGGCCCCTGAAATGGTGGAAAA
CAAAGAACATGATTATGCTGTAGATAACTGGACGTTGGGTATTCTTTGCT
ATGAGTTCCTCTATGGTGCTCCTCCATTTGAGGCAGAGAGTCAAAAGACA
CGTTCAGAAGGA
back to top