FC923279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_PROMP (Dihydrodipicolinate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dapB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.483e-20 Identity = 65/200 (32.50%), Postives = 108/200 (54.00%), Query Frame = 1 Query: 4 SRGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVMSDLTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPRL 576 S E+ AID++ GE+I + ++++ ++ V +DL L SISQ K + V++DFT +VY+N + A A+G+ VV + ++ L+ F KA++GC I P S+G +LLQQAA A+ Y N+E++E N + D PS + A + + YN+ + +G G + G+ +HS+ LP L Sbjct: 31 SSDCELVAAIDTNKKNNGENISQLLNLKKS-DVLVSNDLEGSLCSISQDYRNEKIKPVLVDFTHPDSVYENTRSAIAYGISPVVGTTGLTPSQINDLAIFAQKANIGCAIIPNFSVGMVLLQQAASVAAKFYDNIELIEMHHNQKADSPSGTCIKTAEMIEEYPKKYNQSLVEESESLKGVRGGVRDSGLNIHSIRLPGL 229
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_SYNSC (Dihydrodipicolinate reductase OS=Synechococcus sp. (strain CC9605) GN=dapB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.361e-20 Identity = 65/195 (33.33%), Postives = 107/195 (54.87%), Query Frame = 1 Query: 19 VAGAIDSH--SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSK----ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPRL 576 + GAID+ G D+G+ + + LE+ V +D L ++SQS + AV++DFT S VY++ + A A+G+ V+ + E ++ L+ F KAS+G + P S+G +LLQQAA +A+ Y + E+ E N + D PS + A + LG+ +N E++ G G + G+R+HS+ LP L Sbjct: 32 LVGAIDNTPGKEGADVGLELGLGE-LEVAVTADFEGCLCAVSQSVRDSGSGAVLVDFTHPSVVYEHTRAAIAYGVHPVIGTTGLSPEQLNDLTEFSAKASVGGAVIPNFSVGMVLLQQAAAAAARFYDHAELTELHHNRKADAPSGTCIKTAELMEELGKSFNPEEVDEHESLAGCRGGQRDSGLRLHSVRLPGL 225
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_SYNS9 (Dihydrodipicolinate reductase OS=Synechococcus sp. (strain CC9902) GN=dapB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.039e-18 Identity = 61/196 (31.12%), Postives = 105/196 (53.57%), Query Frame = 1 Query: 16 EVAGAIDSH--SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPRL 576 ++ GAID+ G D+G+ +++ LE+ V +D L ++SQS AV++DFT S V+D+ + A A+G+ V+ + ++ L+ F KAS+G + P S+G +LLQQAA +A+ Y + E+ E N + D PS + A + + Q +N ++ +G G + G+ +HS+ LP L Sbjct: 31 QLVGAIDNTPGKEGTDVGLELGIKE-LEVAVTADFEGCLCAVSQSVRNSDQNAVLVDFTHPSVVFDHTRAAIAYGVHPVIGTTGLSPIQLNDLTEFSAKASIGGAVIPNFSVGMVLLQQAAAAAARFYDHAELTELHHNRKADAPSGTCIKTAELMEEVKQSFNPAEVDEHESLQGSRGGVRDSGLNLHSLRLPGL 225
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_PROMT (Dihydrodipicolinate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=dapB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.039e-18 Identity = 63/202 (31.19%), Postives = 104/202 (51.49%), Query Frame = 1 Query: 4 SRGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR------AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGE--DGVRVHSMVLPRL 576 S+ ++ GAID+ G+DIG + + + L++ + SD L + SQ+ + AV++DFT Y + + + A+G+ V+ I + + LS F DKAS+G I P S+G +LLQQAA +A+ Y+ E+ E N + D PS + A + +NR + + +G G G+R+HS+ LP L Sbjct: 30 SKDFQLVGAIDNQKDKEGQDIGSLLGLGE-LDVFLSSDFEGSLCAASQNVPKDGSNNGAVLVDFTHPKFAYKHTRTSIAYGVHPVIGTTGITADQLDDLSKFADKASLGSAIIPNFSVGMVLLQQAAAAAARFYEFAELTEMHHNKKADAPSGTCIKTAELIEEQRSNFNRSFVEEEESIKGSRGGSRASGLRLHSVRLPGL 230
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_LISMH (Dihydrodipicolinate reductase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dapB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.588e-14 Identity = 54/192 (28.12%), Postives = 94/192 (48.96%), Query Frame = 1 Query: 13 MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPRL 576 +E+ +D ++I + + L++PV +L+ +L I V+DFT Y N K G+R+VV E +S L + + +G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A + A ++ + + +++ ARG +G+R+HS+ LP L Sbjct: 26 LELVAVLDHEPKEKNINEIVEFSS-LDVPVFGNLSEMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRSIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAVKTAEMMAETREFVKQGAADEVELIEGARGSEY--EGMRIHSVRLPGL 210
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_LISMF (Dihydrodipicolinate reductase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dapB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.074e-14 Identity = 54/192 (28.12%), Postives = 94/192 (48.96%), Query Frame = 1 Query: 13 MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPRL 576 +E+ +D ++I + + L++PV +L+ +L I V+DFT Y N K G+R+VV E +S L + + +G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A + A ++ + + +++ ARG +G+R+HS+ LP L Sbjct: 26 LELVAVLDHEPKEKNINEIVEFSS-LDVPVFGNLSEMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRSIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAVKTAEMMAETREFVKQGAADEVELIEGARGAEY--EGMRIHSVRLPGL 210
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_LISMC (Dihydrodipicolinate reductase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dapB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.074e-14 Identity = 54/192 (28.12%), Postives = 94/192 (48.96%), Query Frame = 1 Query: 13 MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPRL 576 +E+ +D ++I + + L++PV +L+ +L I V+DFT Y N K G+R+VV E +S L + + +G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A + A ++ + + +++ ARG +G+R+HS+ LP L Sbjct: 26 LELVAVLDHEPKEKNINEIVEFSS-LDVPVFGNLSEMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRSIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAVKTAEMMTETREFVKQGAADEVELIEGARGAEY--EGMRIHSVRLPGL 210
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_LISIN (Dihydrodipicolinate reductase OS=Listeria innocua GN=dapB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.621e-14 Identity = 56/193 (29.02%), Postives = 95/193 (49.22%), Query Frame = 1 Query: 13 MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLGQIYNR---EDISTDVKARGQVLGE-DGVRVHSMVLPRL 576 +E+ +D ++I + + L++PV DL+ +L I V+DFT Y N K +R+VV E +S L + + +G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A + A ++ + + +++ ARG GE +G+R+HS+ LP L Sbjct: 26 LELVAVLDHEPKEKNIREIVEFSS-LDVPVYGDLSEMLEEIKPD----CVVDFTIPKVGYSNTKTILEHSVRAVVGTTGFTPEQISELKSIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAVKTAEMMAETREFVKQGAADEVELIEGARG---GEYEGMRIHSVRLPGL 210
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_LISMO (Dihydrodipicolinate reductase OS=Listeria monocytogenes GN=dapB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.345e-13 Identity = 53/192 (27.60%), Postives = 92/192 (47.92%), Query Frame = 1 Query: 13 MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPRL 576 +E+ +D ++I + + L++PV +L+ +L I V+DFT Y N K G+R+VV E +S L + +G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS + A ++ + + +++ ARG +G+R+HS+ LP L Sbjct: 26 LELVAVLDHEPKEKNINEMVEFSS-LDVPVFGNLSEMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRTIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTGVKTAEMMAETREFVKQGAADEVELIEGARGAEY--EGMRIHSVRLPGL 210
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_COXBU (Dihydrodipicolinate reductase OS=Coxiella burnetii GN=dapB PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.995e-13 Identity = 51/176 (28.98%), Postives = 91/176 (51.70%), Query Frame = 1 Query: 94 IPVMSDLTMVLGS--------ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPRLPSSTTV 594 I SDL +V G+ Q+ VVIDFT +V+ N + G R V+ + LE ++ L C +G ++AP S+G++L+ + A A+ ++ +VEI+E + + D PS A + A + + +++D +ARG++ ++G+ +HS+ LP L S +V Sbjct: 22 ITAQSDLELVSGTGRQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTGLTLEQIALLDKQCRNKKLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDAPSGTAIKTAQMIGEMRS--SKKDEPFKDRARGEI--KNGIPIHSIRLPGLFSHQSV 193 The following BLAST results are available for this feature:
BLAST of FC923279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923279 ID=FC923279; Name=FC923279; organism=Citrus clementina; type=EST; length=597bpback to top |