FC923280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923280 vs. ExPASy Swiss-Prot
Match: RCBT2_RAT (RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus GN=Rcbtb2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12 Identity = 51/179 (28.49%), Postives = 86/179 (48.04%), Query Frame = 2 Query: 38 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGLHVISV-ACGYGHS 550 L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV +N V+ I+ G + S G++Y+WG N G P P + L G ++ + G H V D I +WG YG+LG G +S P ++E +I + AC H+ Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV---MSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEIAACHSAHT 321 HSP 2 Score: 72.0182 bits (175), Expect = 3.058e-12 Identity = 54/198 (27.27%), Postives = 89/198 (44.95%), Query Frame = 2 Query: 20 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKP------LMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQYGELGYGPYGQKSSAMPKKVDILEGLHVISVACGYGHSLVIVDRTNV 577 PR + +L G+ I ++ G+ H V + G V+TWG Y +LG+ VP + N + ++ GS +S G+++ WG + +G P P L + ++ C G M D+ + WG+ G+LG G G + + P +V L+G+ V VACGY H+LV+ D + Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQV---IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIAC---GQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHTLVLTDEGQI 278 HSP 3 Score: 67.0106 bits (162), Expect = 9.836e-11 Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 2 Query: 11 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 301 QP P +AAL G + +VACG HT+ + +G +Y WG YG+LG + ++ P V V +++ ++ A SA + S+ + GG +YMWG+ + Sbjct: 245 QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKSQGGHVYMWGQCR 338
BLAST of FC923280 vs. ExPASy Swiss-Prot
Match: HERC4_RAT (Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.373e-12 Identity = 53/188 (28.19%), Postives = 83/188 (44.15%), Query Frame = 2 Query: 20 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGLHVISVACGYGHSLVI 559 PR + + V CG HTV V G VYT G G+LGH + + + P +V N++ +S G ++ GQ+Y WG L+ + + P+ + LS + + G H + S WG +YG+LG G QK ++ P+ + L G+ + VA G HS V+ Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIV----AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVL 205 HSP 2 Score: 70.8626 bits (172), Expect = 6.812e-12 Identity = 48/200 (24.00%), Postives = 88/200 (44.00%), Query Frame = 2 Query: 5 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGLHVISVACGYGHSLVIVDRTNV 577 +++ +P + AL + IV V+CG HT+A++ KG VY WG G+LG + ++ VPR + ++ ++ G +S + +++ WG+ K P+ + L G + +G H FV S I WG ++G+LG + +P + L ++ + CG H+ + V Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQ----VACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN--DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
BLAST of FC923280 vs. ExPASy Swiss-Prot
Match: HERC4_MOUSE (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12 Identity = 51/200 (25.50%), Postives = 90/200 (45.00%), Query Frame = 2 Query: 5 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWM---YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGLHVISVACGYGHSLVIVDRTNV 577 +++ +P + AL + IV VACG HT+A++ KG VY WG G+LG + ++ VPR + ++ ++ G +S + +++ WG+ K G D P+ + L G + +G H FV S I WG ++G+LG + +P + L ++ + CG H+ + V Sbjct: 70 KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQ----VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN--DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263 HSP 2 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 52/188 (27.66%), Postives = 83/188 (44.15%), Query Frame = 2 Query: 20 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGLHVISVACGYGHSLVI 559 PR + + V CG HTV V G VYT G G+LGH + + + P +V N++ ++ G ++ GQ+Y WG L+ + + P+ + LS + + G H + S WG +YG+LG G QK ++ P+ + L G+ + VA G HS V+ Sbjct: 25 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIV----AVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVL 205
BLAST of FC923280 vs. ExPASy Swiss-Prot
Match: RCBT2_PONAB (RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.341e-12 Identity = 45/161 (27.95%), Postives = 78/161 (48.45%), Query Frame = 2 Query: 38 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 499 L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV +N V+ I+ G + G++Y+WG N G+ P P + L G ++ + G H V D + +WG YG+LG G +S P V+ Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306 HSP 2 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 54/206 (26.21%), Postives = 92/206 (44.66%), Query Frame = 2 Query: 20 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD----------------DWMYPKPLMDLSGWNLRCM---DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGLHVISVACGYGHSLVIVDRTNV 577 PR + +L G+ I ++ G+ H V ++G V+TWG Y +LG+ VP + N + ++ GS +S G+++ WG N+G + K ++ ++ + CM D+G ++ WG+ G+LG G G + + P +V L+G+ V VACGY H+LV+ D V Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQV---IEVACGSYHSLVLTSDGEVFAWG-YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVY----------VWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278
BLAST of FC923280 vs. ExPASy Swiss-Prot
Match: RCBT2_HUMAN (RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.341e-12 Identity = 45/161 (27.95%), Postives = 78/161 (48.45%), Query Frame = 2 Query: 38 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 499 L+ + +++VACG+ H++ + S G V+ WG+ G++G ++ +PRRV +N V+ I+ G + G++Y+WG N G+ P P + L G ++ + G H V D + +WG YG+LG G +S P V+ Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306 HSP 2 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 54/206 (26.21%), Postives = 92/206 (44.66%), Query Frame = 2 Query: 20 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD----------------DWMYPKPLMDLSGWNLRCM---DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGLHVISVACGYGHSLVIVDRTNV 577 PR + +L G+ I ++ G+ H V ++G V+TWG Y +LG+ VP + N + ++ GS +S G+++ WG N+G + K ++ ++ + CM D+G ++ WG+ G+LG G G + + P +V L+G+ V VACGY H+LV+ D V Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQV---IEVACGSYHSLVLTSDGEVFAWG-YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVY----------VWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVLTDEGQV 278
BLAST of FC923280 vs. ExPASy Swiss-Prot
Match: HERC4_HUMAN (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.216e-12 Identity = 51/200 (25.50%), Postives = 89/200 (44.50%), Query Frame = 2 Query: 5 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDD---WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGLHVISVACGYGHSLVIVDRTNV 577 +++ +P + AL + IV V+CG HT+A++ KG VY WG G+LG ++ VPR + ++ ++ G +S + +++ WG+ K G D P+ L L G + +G H FV S I WG ++G+LG + +P + L ++ + CG H+ + V Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQ----VACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN--DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263 HSP 2 Score: 69.707 bits (169), Expect = 1.518e-11 Identity = 52/188 (27.66%), Postives = 82/188 (43.62%), Query Frame = 2 Query: 20 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGLHVISVACGYGHSLVI 559 PR + + V CG HTV V G VYT G G+LGH + + + P +V N++ +S G ++ GQ+Y WG L + + P+ + LS + + G H + S WG +YG+LG G +K ++ P+ + L G+ + VA G HS V+ Sbjct: 25 PRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIV----AVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVL 205
BLAST of FC923280 vs. ExPASy Swiss-Prot
Match: RCBT1_MOUSE (RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12 Identity = 54/194 (27.84%), Postives = 85/194 (43.81%), Query Frame = 2 Query: 20 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKP------LMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGLHVISVACGYGHSLVIVD 565 P+ + AL G+ I ++ G+ H + G VY WG GY +LG+ P +V N+L + + ++ GS +S A G+L+ WG +G P P L N+ C + +M V WG+ G+LG G G + + P +V L G+ V + CGY H+L + D Sbjct: 65 PKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT----NLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMA--VLDSGEVYGWGYNGNGQLGLGNNGNQLT--PVRVAALHGMCVNQIVCGYAHTLALTD 250
BLAST of FC923280 vs. ExPASy Swiss-Prot
Match: HERC6_HUMAN (Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.982e-11 Identity = 52/190 (27.37%), Postives = 83/190 (43.68%), Query Frame = 2 Query: 20 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGY-GPYGQKSSAMPKKVDILEGLHVISVACGYGHSLVI 559 P I AL + V+CG H++AV KG V+ WG G G+LG E K+ + P+++ ++ +S G +S + Q++ WGK L P+ + L G L + +G H F + + WG G+L G S P V L+ L V+ ++CG H+ V+ Sbjct: 66 PEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQ----VSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVL 251 The following BLAST results are available for this feature:
BLAST of FC923280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923280 ID=FC923280; Name=FC923280; organism=Citrus clementina; type=EST; length=663bpback to top |