FC923282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.891e-36 Identity = 74/93 (79.57%), Postives = 86/93 (92.47%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 MVRGKTQM+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEV++IIFSP+GKL EFASS+MQ+TI+RYL+HTKD + +E+NMQHLK+E Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYE 93
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.159e-29 Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLK 661 MVRGKTQM+RIEN TSRQVTFSKRRNGLLKKAFELSVLCDAEVA+I+FSPRGKL EFAS+S Q+TIERY +TK+ + +Q+++ +K Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTKENIGN-KTVQQDIEQVK 90
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.021e-28 Identity = 62/88 (70.45%), Postives = 73/88 (82.95%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQ 652 MVRGKT+M+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVA++IFSPR KL EF+SSS+ TIERY + K+ N + + + Q Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIERYQRRIKEIGNNHKRNDNSQQ 88
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.625e-27 Identity = 63/94 (67.02%), Postives = 81/94 (86.17%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASS-SMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 MVRG+T+++RIEN TSRQVTFSKRRNGLLKKAFELSVLCDAEVA+I+FSPRG+L EFAS+ S+Q+TI+RY +TKD N + +Q++Q +K + Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNN-KTIQQDIQQVKDD 93
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 2.625e-27 Identity = 63/94 (67.02%), Postives = 81/94 (86.17%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASS-SMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 MVRG+T+++RIEN TSRQVTFSKRRNGLLKKAFELSVLCDAEVA+I+FSPRG+L EFAS+ S+Q+TI+RY +TKD N + +Q++Q +K + Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNN-KTIQQDIQQVKDD 93
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 4.477e-27 Identity = 63/89 (70.79%), Postives = 75/89 (84.27%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEF-ASSSMQETIERYLKHTKDTRNKAQPTEQNMQ 652 MVRGKT+M+RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVA+IIFSPRGKL EF +SSS+ +T+ERY K +D + + + + Q Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNHKRNDNSQQ 89
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.950e-26 Identity = 57/93 (61.29%), Postives = 72/93 (77.42%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 M RGK +++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVA+I+FS RG+L E+A++S++ T+ERY K DT N E N QH + E Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKSTVERYKKANSDTSNSGTVAEVNAQHYQQE 93
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.457e-25 Identity = 55/91 (60.44%), Postives = 73/91 (80.22%), Query Frame = 2 Query: 395 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 RGK +++RIEN T+RQVTF KRR+GLLKKA+ELSVLCDAEVA+++FS RG+L E++++S++ETIERY K DT N + E N QH + E Sbjct: 45 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETIERYKKANSDTSNASTVAEINAQHYQQE 135
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.190e-25 Identity = 56/94 (59.57%), Postives = 74/94 (78.72%), Query Frame = 2 Query: 386 KMVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 K+ RGK +++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVA+I+FS RG+L E+A++S++ TIERY K D+ N +E N Q+ + E Sbjct: 16 KLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTGSISEANAQYYQQE 109
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.190e-25 Identity = 57/94 (60.64%), Postives = 73/94 (77.66%), Query Frame = 2 Query: 386 KMVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 K+ RGK +++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVA++IFS RG+L E+A++S++ TIERY K D N TE N Q+ + E Sbjct: 15 KLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPSVTEANTQYYQQE 108 The following BLAST results are available for this feature:
BLAST of FC923282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923282 ID=FC923282; Name=FC923282; organism=Citrus clementina; type=EST; length=669bpback to top |