FC923282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.473e-25 Identity = 55/94 (58.51%), Postives = 74/94 (78.72%), Query Frame = 2 Query: 386 KMVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 K+ RGK +++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVA+++FS RG+L E+A++S++ TIERY K D+ N +E N Q+ + E Sbjct: 16 KLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNSVKATIERYKKACSDSSNTGSVSEANAQYYQQE 109
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.473e-25 Identity = 56/94 (59.57%), Postives = 73/94 (77.66%), Query Frame = 2 Query: 386 KMVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 K+ RGK +++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVA+I+FS RG+L E+A++S++ TIERY K D+ N E N Q+ + E Sbjct: 16 KLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTGSIAEANAQYYQQE 109
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.335e-25 Identity = 57/94 (60.64%), Postives = 73/94 (77.66%), Query Frame = 2 Query: 386 KMVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 K+ RGK +++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVA++IFS RG+L E+A++S++ TIERY K D N TE N Q+ + E Sbjct: 15 KIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPTITEANTQYYQQE 108
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.219e-24 Identity = 56/94 (59.57%), Postives = 74/94 (78.72%), Query Frame = 2 Query: 386 KMVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 K+ RGK +++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVA+I+FS RG+L E+A++S++ TIERY K D+ N + +E N Q + E Sbjct: 16 KLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQE 109
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.051e-24 Identity = 55/94 (58.51%), Postives = 71/94 (75.53%), Query Frame = 2 Query: 386 KMVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 K RGK +++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVA+I+FS RG+L E++++S++ TIERY K D N E N Q+ + E Sbjct: 16 KAGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQE 109
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 6.051e-24 Identity = 55/94 (58.51%), Postives = 71/94 (75.53%), Query Frame = 2 Query: 386 KMVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 K RGK +++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVA+I+FS RG+L E++++S++ TIERY K D N E N Q+ + E Sbjct: 16 KSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQE 109
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.032e-23 Identity = 54/93 (58.06%), Postives = 73/93 (78.49%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 M RGK +++RIEN+T+RQVTF KRRNGLLKKA+ELSVLCDAEVA+I+FS RG+L E+A+++++ TIERY K D+ N + E N + + E Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTIERYKKACSDSTNTSTVQEINAAYYQQE 93
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.542e-22 Identity = 54/93 (58.06%), Postives = 70/93 (75.27%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 M RGK +++RIENA SRQVTFSKRR+GLLKKA ELSVLCDAEVAVI+FS GKL E++S+ M++T+ RY H + +KA+ + LK + Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLSRYGNHQSSSASKAEEDCAEVDILKDQ 93
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 5.663e-22 Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLK--HTKDTRNKAQPTEQN 646 M RG+ +M+RIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVA+IIFS RGKL EF S ++ TIERY + + + NK + T Q+ Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIERYNRCYNCSLSNNKPEETTQS 88
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.262e-21 Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSS-MQETIERYLKHTKDTRNKAQPTEQNMQH 655 M RGK ++RIEN SRQVTF+KRRNGLLKKA+ELS+LCDAEVA+++FS G+L +F+SSS M +T+ERY ++ +++ A PT MQ+ Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQN 90 The following BLAST results are available for this feature:
BLAST of FC923282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923282 ID=FC923282; Name=FC923282; organism=Citrus clementina; type=EST; length=669bpback to top |