FC923284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHIE6 (Glucose-1-phosphate adenylyltransferase OS=Rhizobium etli (strain CIAT 652) GN=glgC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 67/220 (30.45%), Postives = 102/220 (46.36%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIV--GVR----SRLESGV 593 AD+T+ C+ + A+ +G+M ++ +I+ F EKP P +PD F +ASMG+Y+F T LL+ LR S DFG +IIP V++ A F YW D+GTI +++ AN+ LT + + YD P +T A PP K R +++S C + S+ S++ GVR S+LE V Sbjct: 154 ADVTIGCLEVPRMEATGFGVMHVNDKDEILAFVEKPADPP-------------GIPDKPDFA-LASMGIYVFHTKFLLDALRRDAADPNSSRDFGKDIIPYIVQNGKAVAHRFAKSCVRSDFEHEPYWRDVGTIDAYWQANIDLTAIVPELDIYDKSWPIWTYAEITPPAKFVHDDEDRRGSATSSVVSGDCIISGASLNKSLLFTGVRANSFSKLEGAV 359
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_LACCB (Glucose-1-phosphate adenylyltransferase OS=Lactobacillus casei (strain BL23) GN=glgC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 63/217 (29.03%), Postives = 104/217 (47.93%), Query Frame = 3 Query: 9 KADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLS---NDFGSEIIPASVKDHNVQ-AFLFNDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTP---------FYTSARFLPPTKVDR-CKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 KA +TV+ +P++ A +G+M D + +II+F EKP P +ASMG+Y+F L L SY DFG ++IPA + + A+ F YW+D+GTI+S ++AN+ EF +P P ++ LPP + + K+ ++I GC++ S+QHSI+ ++ G +D+M+M Sbjct: 145 KASLTVAVMPVEKEEAKRFGIMNTDDTDRIIEFEEKPAKPKSN---------------------LASMGIYIFNWPTLKQYLTESYATDGAMEDFGHDVIPAYLTHNEASYAYAFRGYWKDVGTIQSLWEANM---------EFLNPNNPLNIGNRNWRIFSQNEALPPMFLTKTAKVAGSMIVDGCYVAG-SIQHSILSQNVKIGEGSVIKDSMIM 330
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_LACC3 (Glucose-1-phosphate adenylyltransferase OS=Lactobacillus casei (strain ATCC 334) GN=glgC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 63/217 (29.03%), Postives = 104/217 (47.93%), Query Frame = 3 Query: 9 KADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLS---NDFGSEIIPASVKDHNVQ-AFLFNDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTP---------FYTSARFLPPTKVDR-CKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 KA +TV+ +P++ A +G+M D + +II+F EKP P +ASMG+Y+F L L SY DFG ++IPA + + A+ F YW+D+GTI+S ++AN+ EF +P P ++ LPP + + K+ ++I GC++ S+QHSI+ ++ G +D+M+M Sbjct: 145 KASLTVAVMPVEKEEAKRFGIMNTDDTDRIIEFEEKPAKPKSN---------------------LASMGIYIFNWPTLKQYLTESYATDGAMEDFGHDVIPAYLTHNEASYAYAFRGYWKDVGTIQSLWEANM---------EFLNPNNPLNIGNRNWRIFSQNEALPPMFLTKTAKVAGSMIVDGCYVAG-SIQHSILSQNVKIGEGSVIKDSMIM 330
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_THENN (Glucose-1-phosphate adenylyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=glgC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19 Identity = 63/231 (27.27%), Postives = 113/231 (48.92%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKDH--NVQAFLFNDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV-DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIG 686 AD T++C+ + AS +G+M D G+I+ F EKP P +AS+G+Y+F + L +L + S+DFG ++IP ++++ ++ AF F+ YW D+GTI+S+++ANL L F YDP F+T + +PP V + ++IS G + V +S++ R+ G +++++M + +++ V IG Sbjct: 145 ADGTIACMEVPLEEASRFGIMITDVEGRIVDFEEKPPKPRSN---------------------LASLGIYVFNYEFLKRVLIEDENDPNSSHDFGKDVIPKILRENKGSLYAFRFDGYWRDVGTIRSYWEANLELVLPVPPFNLYDPNWRFFTHSEEMPPAYVAPEARTSTSLISEGAEVYG-EVTNSVIFQGVRIGKGTVVKNSVIMTRTEIGENCYLENVIVAENVKIG 353
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHITR (Glucose-1-phosphate adenylyltransferase OS=Rhizobium tropici GN=glgC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19 Identity = 65/247 (26.32%), Postives = 111/247 (44.94%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 AD+T+ C+ + A +G+M +D +II F EKP P +P F +ASMG+Y+F T L+ L+ S DFG +IIP VK+ A F YW D+GTI +++ AN+ LT + + YD P +T A PP K R V ++++ C + S+ +S++ R S + + +++ + +++ +++ + V I G Sbjct: 154 ADVTIGCLEVPRMEAVGFGVMHVDDKDRIIDFVEKPADPP-------------GIPGNPDFA-LASMGIYVFHTKFLIECLKRDAADPNSSRDFGKDIIPHIVKNGKAVAHRFTQSCVRSDFEREAYWRDVGTIDAYWQANIDLTAVVPELDIYDKSWPIWTYAEISPPAKFVHDDEDRRGSAVSSVVAGDCIISGASLYNSLLFTGVRANSYSKLEGAVVLPSVKVGRRAQLKNVVIDHGVTIPEG 386
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHIL3 (Glucose-1-phosphate adenylyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=glgC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19 Identity = 66/217 (30.41%), Postives = 100/217 (46.08%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIV--GVRSRLESGVE 596 AD+T+ C+ + A +G+M ++ +II F EKP P +PD F +ASMG+Y+F T LL+ LR S DFG +IIP VK+ A F YW D+GTI +++ AN+ LT + + YD P +T A PP K R +++S C + + +S++ GVR+ S +E Sbjct: 154 ADVTIGCLEVPRMEAVGFGVMHVNDKDEIIAFVEKPADPP-------------PIPDKPDFA-LASMGIYVFHTKFLLDALRRDAADPNSSRDFGKDIIPYIVKNGKAVAHRFAKSCVRSDFEHEPYWRDVGTIDAYWQANIDLTAIVPELDIYDKSWPIWTYAEITPPAKFVHDDEDRRGSATSSVVSGDCIISGAMLNNSLLFTGVRANSFSKME 356
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_AGRRK (Glucose-1-phosphate adenylyltransferase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=glgC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19 Identity = 65/217 (29.95%), Postives = 100/217 (46.08%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIV--GVRSRLESGVE 596 A++T+ C+ + A +G+M +D QII F EKP P +P F +ASMG+Y+F T L+ L+ S DFG +IIP VK+ A F YW D+GTI +++ AN+ LT + + YD P +T A PP K R V ++++ C + S+ +S++ GVR+ S +E Sbjct: 154 AEVTIGCLEVPRMEAVGFGVMHVDEKDQIIDFVEKPADPP-------------GIPGNPDFA-LASMGIYVFHTKFLIECLKRDAADPNSSRDFGKDIIPYIVKNGKAVAHRFAQSCVRSDFEREAYWRDVGTIDAYWQANIDLTAVVPELDIYDKSWPIWTYAEISPPAKFVHDDENRRGSAVSSVVAGDCIISGASLSNSLLFTGVRANSYSKLE 356
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_NITMU (Glucose-1-phosphate adenylyltransferase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=glgC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 58/221 (26.24%), Postives = 108/221 (48.87%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLFND----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 A++T++C+ + AS +G+M + + G++ F EKP P ++P + + SMG+Y+F D L + L + S+DFG ++IP V V F+D YW D+GT++++++ANL L + YD P +T LPP K R + +D+++S GC + +V+ S++ ++ S +D++++ Sbjct: 157 AEMTIACIDLPLEEASAFGVMSVTKDGRVTDFTEKPSVPT-------------AVPGRPGYALV-SMGIYVFNADFLFDQLIRDHDDPNSSHDFGKDLIPHLVPRSRVFTHRFSDSCVNMVSGVPYWRDVGTVEAYWEANLDLVQVTPDLNLYDQDWPIWTHQEQLPPAKFVFDNDDRRGQALDSMVSGGCIISGATVRRSLLFSNVQVRSYSVLEDSVIL 363
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_ANADE (Glucose-1-phosphate adenylyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=glgC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 66/225 (29.33%), Postives = 108/225 (48.00%), Query Frame = 3 Query: 9 KADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLN--LLRSSYPLS-NDFGSEIIPASVKDHNVQAFLF------------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV-------DRC-KIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMM 614 KAD+TV+ VP+ AS++G++++D G+++ F EKP D K M D T +ASMG YLF T+ L+ + + P S +DFG I+ + + V + F YW D+G+I ++F AN+ L F Y+ P +T PP K +R + D++IS GC + V HSI+ + R+ S +++++ Sbjct: 142 KADLTVAAVPIPVGEASEFGIIEVDAEGRMVGFVEKPTS-DPKTMPGDPTRC------------LASMGNYLFTTEALVQEIVRDAGDPASAHDFGKSIVASMYQRKRVYVYDFARNVVPGQTERERGYWRDVGSIDAYFQANMDLVAVDPVFSLYNDEWPIFTVQYNYPPAKFVFNNERDNRIGRATDSLISEGCIISGAHVHHSILSPKVRVNSYATVEESIV 353
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SALTI (Glucose-1-phosphate adenylyltransferase OS=Salmonella typhi GN=glgC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19 Identity = 67/223 (30.04%), Postives = 105/223 (47.09%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP-DAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV--DRC----KIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 A TV+C+P+ A+ +G+M +D + +II F EKP P +MP DA K +ASMG+Y+F D L LL + S+DFG +IIP ++ A F YW D+GT+++++ ANL L + + YD P T LPP K DR +++++S GC + V S++ R R+ S +++ Sbjct: 161 ARCTVACMPVPIKEATAFGVMAVDENDKIIDFVEKPANPP-------------AMPGDASKS--LASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLASVTPELDMYDQNWPIRTHMESLPPAKFVQDRSGSHGMTLNSLVSGGCIISGSVVVQSVLFPRVRINSFCNIDSAVLL 368 The following BLAST results are available for this feature:
BLAST of FC923284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923284 ID=FC923284; Name=FC923284; organism=Citrus clementina; type=EST; length=698bpback to top |