FC923284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC1_ALHEH (Glucose-1-phosphate adenylyltransferase 1 OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glgC1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23 Identity = 66/218 (30.28%), Postives = 112/218 (51.38%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKVDRCK------IVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 A +TV CV + RAS +G+M ++ Q++ F EKPK P T + G PD + SMG+Y+F D L LLR ++ S DFG ++IP ++ +H VQA+ F+D YW D+GT+ +FF AN+ L + + YD P +T LPP K + + +++++S G + V+ S++ + ++ G + +++ Sbjct: 158 AAMTVGCVEVPRKRASAFGVMSVNEERQVLAFNEKPKDP--------TPMPG--NPDRA----LVSMGIYVFDRDYLFQLLREDAENFDSSRDFGKDVIPNAIANHKVQAYPFSDPVSGQQAYWRDVGTVDAFFQANMELIGEDPELNLYDEEWPIWTYQAQLPPAKFIQGRDGRHGTAINSMVSGGDIIHGAEVRDSLLFSQVVVQPGATVHEAVIL 361
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_THICR (Glucose-1-phosphate adenylyltransferase OS=Thiomicrospira crunogena (strain XCL-2) GN=glgC PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23 Identity = 63/217 (29.03%), Postives = 107/217 (49.31%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKDHNVQAFLFND------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+T+ C+ + A+ +G+M +D +I +F EKP PD + D L ASMG+Y+F T+ L L + S DFG +IIP+ ++D V+AF F D YW D+GTI+S++ A+L L YD P +T +PP K R + +D++++ GC + ++ S++ + S +D++++ Sbjct: 157 ADVTIGCIEVPRMEATGFGVMSVDECFKITKFTEKPANPDAMPHKPDKAL--------------ASMGIYVFSTEFLFQKLIEDADNPNSSRDFGKDIIPSIIEDWQVRAFPFEDETGLPVYWRDVGTIESYWKASLDLCSITPDLNLYDEDWPIWTYQAQMPPAKFIFDDEGRRGEAIDSLVAGGCIISGARIKRSVISSGGHVHSFCLVKDSVLL 359
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_TERTT (Glucose-1-phosphate adenylyltransferase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=glgC PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23 Identity = 72/224 (32.14%), Postives = 115/224 (51.34%), Query Frame = 3 Query: 12 ADITVSC--VPMDDSRASDYGLMKIDRSGQIIQFAEKPKGP----DLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TVSC VP++++ A +G+M +D + +I++F EKPK P D+ GM +ASMG Y+F T+ L LR+ +DFG IIPA +K+ NV+A+ F D YW D+GT+ SF+ AN+ L E + Y+ P +T LPP K R VD+++S GC + V S++ + S + ++++++ Sbjct: 156 ADLTVSCIEVPIEEA-AGAFGVMTVDDNNRILRFDEKPKHPTELNDMPGMT------------------LASMGNYIFNTEFLFEQLRADAENPESEHDFGKNIIPAIIKNSNVRAYRFRDHETDRASYWRDVGTLDSFWLANMELVEPSPQLNLYNQDWPIWTYQTHLPPAKFVFDDDDRRGYAVDSMVSGGCIVSGGKVSKSLLFSDVHVHSYTDLEESVVL 360
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_VIBFM (Glucose-1-phosphate adenylyltransferase OS=Vibrio fischeri (strain MJ11) GN=glgC PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.627e-22 Identity = 65/224 (29.02%), Postives = 116/224 (51.79%), Query Frame = 3 Query: 3 RPKADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL---SNDFGSEIIPASVKDHNVQAFLFND----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKVD-----RCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMG 620 + KA +TVS + M AS +G++++D G++I F EKP P +C G+++ SMG Y+F + L L L S+DFG +IIP + NV + F+ YW D+GTI+S+++A++ L ++ A F Y+ + P +T LPP R +I+D+++ G ++R ++ S++G RS + S + +++++G Sbjct: 140 KKKAALTVSALRMPAKDASGFGVIEVDEHGKMIGFEEKPSNP-----KCIPGQPGIAL---------VSMGNYIFEAESLCKELIHDAALEDSSHDFGKDIIPKMFPEGNVYVYDFSTNHITGEKKEVYWRDVGTIESYWEAHMDLLKKDAPFSLYNRKWPLHTYYPPLPPATFSDSDNGRVQIIDSLVCGGSYIRGSRIEKSVLGFRSNIASACDISESILLG 349
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_VIBF1 (Glucose-1-phosphate adenylyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=glgC PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.627e-22 Identity = 65/224 (29.02%), Postives = 116/224 (51.79%), Query Frame = 3 Query: 3 RPKADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL---SNDFGSEIIPASVKDHNVQAFLFND----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKVD-----RCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMG 620 + KA +TVS + M AS +G++++D G++I F EKP P +C G+++ SMG Y+F + L L L S+DFG +IIP + NV + F+ YW D+GTI+S+++A++ L ++ A F Y+ + P +T LPP R +I+D+++ G ++R ++ S++G RS + S + +++++G Sbjct: 140 KKKAALTVSALRMPAKDASGFGVIEVDEHGKMIGFEEKPSNP-----KCIPGQPGIAL---------VSMGNYIFEAESLCKELIHDAALEDSSHDFGKDIIPKMFPEGNVYVYDFSTNHIKGEKKEVYWRDVGTIESYWEAHMDLLKKDAPFSLYNRKWPLHTYYPPLPPATFSDSDNGRVQIIDSLVCGGSYIRGSRIEKSVLGFRSNIASACDISESILLG 349
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC1_VIBCH (Glucose-1-phosphate adenylyltransferase 1 OS=Vibrio cholerae GN=glgC1 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 69/248 (27.82%), Postives = 125/248 (50.40%), Query Frame = 3 Query: 3 RPKADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLF----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPP-----TKVDRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 R +A++TVS + M S+AS +G++++D +G+++ F EKP P S+P ++ + SMG Y+F + L LR + S+DFG +IIP V + F + YW D+GTI+S++ A++ L ++ +F Y+ P +T LPP K + KI D++IS G +++ ++ S++G RS + +G +++++G I + ++ V I G Sbjct: 140 RMEAELTVSALRMPISQASQFGVIEVDENGKMVGFEEKPSNPK-------------SIPGEPEWA-LVSMGNYIFEAETLSKELREDAENNQSSHDFGKDIIPKMFPRGKVYVYDFTTNKIKGEKESTYWRDVGTIESYWSAHMDLLDKDPEFSLYNRSWPLHTYYPPLPPATFVDVKDKKVKITDSLISGGSYIQGSTIYKSVLGFRSNIAAGSFISESVILGDVKIGAGCTIKRAIIDKDVEIAAG 373
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_METFK (Glucose-1-phosphate adenylyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=glgC PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 67/224 (29.91%), Postives = 112/224 (50.00%), Query Frame = 3 Query: 3 RPKADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKDHNVQAFLFND----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 R KAD+TV+C+ + AS +G+M +D + +++ F EKP P S+PD +ASMG+Y+F L L S+DFG +IIP +K + V A F D YW D+GT+ ++++AN+ LT+ + YD + P +T LPP K R + D++IS GC + +V++S++ R+ S + ++++ Sbjct: 156 RNKADMTVACINVPLKEASAFGVMGVDENDRVVDFEEKPAHPS-------------SLPDDPDHA-LASMGIYVFNAAFLYEQLIRDADDPKSSHDFGHDIIPYLIKKYRVFAHRFTDSCVGAADGNYYWRDVGTVDAYWEANMELTKVVPELNLYDRQWPIWTYQEQLPPAKFVFDNEERRGQATDSLISGGCIVSGANVRNSVLFSDVRVNSYSSIEQSVIL 365
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_MAGSA (Glucose-1-phosphate adenylyltransferase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=glgC PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 67/222 (30.18%), Postives = 105/222 (47.30%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSY---PLSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TV+C+ + A +G+M +D ++I+F EKP P D L ASMG+Y+F +L +LL+ S+DFG +IIP+ VK H V A F D YW D+GTI ++++AN+ LT YD P +T PP K R VD++++ GC + V+ S++ R+ S +D +++ Sbjct: 163 ADVTVACIEVPLETAKGFGVMAVDEDDRVIRFDEKPDHPQPMPGHPDQAL--------------ASMGIYIFNAQLLFDLLQKDSINPETSHDFGKDIIPSLVKSHRVIAHHFQDSCVMHEGAREHYWRDVGTIDAYWEANIDLTTVTPALNLYDESWPIWTDQPQSPPAKFVFDSEHRRGMAVDSLVAGGCIVSGAVVRRSMLFSNVRVNSFCVVEDAVIL 370
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHOPT (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=glgC PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 71/247 (28.74%), Postives = 119/247 (48.18%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLFN-----------DYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLL--AERKVPIG 686 AD+TV C+ + + A+ +G+M D + +II F EKP P + D +L+ SMG+Y+F T LL+ LR S+DFG +IIP VK A F+ YW D+GT+ +++ AN+ LT+ + + YD P +T PP K R + V +++S GC + S++HS++ R+ S ++T+++ + +++ AE K+P G Sbjct: 154 ADVTVGCLEVPRAEATAFGVMHTDTTDRIISFLEKPADPPAMPGKADKSLV--------------SMGIYVFETKFLLDELRRDAADPNSSHDFGKDIIPYIVKHGKAVAHHFDKSCRRSSSEAVSYWRDVGTVDAYWAANIDLTDIVPELDLYDREWPIWTYGEITPPAKFVHDKEGRRGEAVSSLVSGGCIISGASLRHSLLFTGVRVHSFSHVENTVVLPYADIGRSCRLKNVVIDAEVKLPAG 386
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHOPA (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris GN=glgC PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 71/247 (28.74%), Postives = 119/247 (48.18%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLFN-----------DYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLL--AERKVPIG 686 AD+TV C+ + + A+ +G+M D + +II F EKP P + D +L+ SMG+Y+F T LL+ LR S+DFG +IIP VK A F+ YW D+GT+ +++ AN+ LT+ + + YD P +T PP K R + V +++S GC + S++HS++ R+ S ++T+++ + +++ AE K+P G Sbjct: 154 ADVTVGCLEVPRAEATAFGVMHTDTTDRIISFLEKPADPPAMPGKADKSLV--------------SMGIYVFETKFLLDELRRDAADPNSSHDFGKDIIPYIVKHGKAVAHHFDKSCRRSSSEAVSYWRDVGTVDAYWAANIDLTDIVPELDLYDREWPIWTYGEITPPAKFVHDKEGRRGEAVSSLVSGGCIISGASLRHSLLFTGVRVHSFSHVENTVVLPYADIGRSCRLKNVVIDAEVKLPAG 386 The following BLAST results are available for this feature:
BLAST of FC923284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923284 ID=FC923284; Name=FC923284; organism=Citrus clementina; type=EST; length=698bpback to top |