FC923284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_DECAR (Glucose-1-phosphate adenylyltransferase OS=Dechloromonas aromatica (strain RCB) GN=glgC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 65/221 (29.41%), Postives = 105/221 (47.51%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL---SNDFGSEIIPASVKDHNVQAFLFND----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TV+C+ + A ++G+M +D ++I F EKP+ P Q D L ASMG+Y+F T L L + DFG +IIP V + V A F D YW D+GTI ++++AN+ +T+ + YD P +T +PP K R VD++I+ GC + SV+ S++ + S +D++++ Sbjct: 172 ADMTVACIDVPLDEAREFGVMGVDEQDRVIDFVEKPQNPPAIPGQPDRAL--------------ASMGIYIFNTKFLFEQLERDAMTKGSNRDFGKDIIPYIVPRYRVFAHRFADSCVGSDNHRPYWRDVGTIDAYWEANMEMTKVTPELNVYDRDWPIWTYQEQIPPAKFVFDDEDRRGTAVDSLIAGGCIISGASVKRSLLFSSVNVHSWASVEDSVVL 378
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC1_VIBVY (Glucose-1-phosphate adenylyltransferase 1 OS=Vibrio vulnificus (strain YJ016) GN=glgC1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 66/246 (26.83%), Postives = 121/246 (49.19%), Query Frame = 3 Query: 9 KADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKDHNVQAFLFND----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV-----DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 +A +TVS + M + AS +G++++D G+++ F EKP P S+P F + SMG Y+F DVL L + S+DFG +IIP +V + F+ YW D+GTI +++ A++ L + A F Y+ + P +T LPP R +I+D+++ +G ++R ++ S++G RS + S + +++++G + ++ ++ V I G Sbjct: 142 QAALTVSALRMPLAEASQFGVIEVDAEGRMVGFEEKPSAPK-------------SIPGDPDFALV-SMGNYIFEADVLFAELIEDADNENSSHDFGKDIIPKMFPRGDVFVYDFSQNRISGEKAEVYWRDVGTIDAYWQAHMDLLKTDAPFSLYNRKWPLHTYQPPLPPATFTDSDNGRVQIIDSLVCNGSYVRGSRIEKSVLGFRSNIASACDISESILLGDVKVGEGCVLRRVIVDKDVDIAPG 373
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SHESR (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain MR-7) GN=glgC PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 69/219 (31.51%), Postives = 109/219 (49.77%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASD-YGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TVSC+ + + A+ +G+M++D +I+ F EKPK P + L ASMG Y+F T+ L + L+ +N DFG +IIP+ ++ H V A+ F YW D+GT+ SF+ AN+ L YD + P +T LPP K R VD+IIS GC + +V+ S++ R+ S +D++++ Sbjct: 154 ADMTVSCLEVPVAEAAGAFGVMEVDDEMRILGFEEKPKHPKHSPGNPEKCL--------------ASMGNYVFNTEFLFDQLKKDAQNANSDRDFGKDIIPSIIEKHKVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTYQEQLPPAKFVFDDDDRRGMAVDSIISGGCIISGATVRRSVLFNEVRVCSYSVVEDSVVL 358
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SHESM (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain MR-4) GN=glgC PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 69/219 (31.51%), Postives = 109/219 (49.77%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASD-YGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TVSC+ + + A+ +G+M++D +I+ F EKPK P + L ASMG Y+F T+ L + L+ +N DFG +IIP+ ++ H V A+ F YW D+GT+ SF+ AN+ L YD + P +T LPP K R VD+IIS GC + +V+ S++ R+ S +D++++ Sbjct: 154 ADMTVSCLEVPVAEAAGAFGVMEVDDEMRILGFEEKPKHPKHSPGNPEKCL--------------ASMGNYVFNTEFLFDQLKKDAQNANSDRDFGKDIIPSIIEKHKVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTYQEQLPPAKFVFDDDDRRGMAVDSIISGGCIISGATVRRSVLFNEVRVCSYSVVEDSVVL 358
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC1_VIBVU (Glucose-1-phosphate adenylyltransferase 1 OS=Vibrio vulnificus GN=glgC1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 66/245 (26.94%), Postives = 120/245 (48.98%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKDHNVQAFLFND----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV-----DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 A +TVS + M + AS +G++++D G+++ F EKP P S+P F + SMG Y+F DVL L + S+DFG +IIP +V + F+ YW D+GTI +++ A++ L + A F Y+ + P +T LPP R +I+D+++ +G ++R ++ S++G RS + S + +++++G + ++ ++ V I G Sbjct: 143 AALTVSALRMPLAEASQFGVIEVDAEGRMVGFEEKPSAPK-------------SIPGDPDFALV-SMGNYIFEADVLFAELIEDADNENSSHDFGKDIIPKMFPRGDVFVYDFSQNRISGEKAEVYWRDVGTIDAYWQAHMDLLKTDAPFSLYNRKWPLHTYQPPLPPATFTDSDNGRVQIIDSLVCNGSYVRGSRIEKSVLGFRSNIASACDISESILLGDVKVGEGCVLRRVIVDKDVDIAPG 373
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SHESA (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain ANA-3) GN=glgC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21 Identity = 69/219 (31.51%), Postives = 108/219 (49.32%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASD-YGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TVSC+ + + A+ +G+M++D +I+ F EKPK P + L ASMG Y+F T+ L L+ +N DFG +IIP+ ++ H V A+ F YW D+GT+ SF+ AN+ L YD + P +T LPP K R VD+IIS GC + +V+ S++ R+ S +D++++ Sbjct: 154 ADMTVSCLEVPVAEAAGAFGVMEVDDEMRILGFEEKPKHPKHSPGNPEKCL--------------ASMGNYVFNTEFLFEQLKKDAQNANSDRDFGKDIIPSIIEKHKVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTYQEQLPPAKFVFDDDDRRGMAVDSIISGGCIISGATVRRSVLFNEVRVCSYSVVEDSVVL 358
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB8 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS185) GN=glgC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21 Identity = 69/220 (31.36%), Postives = 110/220 (50.00%), Query Frame = 3 Query: 12 ADITVSC--VPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TVSC VP+ ++ A +G+M++D +I+ F EKP+ P + L ASMG Y+F T+ L + L+ + DFG +IIPA ++ HNV A+ F YW D+GT+ SF+ AN+ L YD + P +T LPP K R +D+I+S GC + +V+ S++ R+ S +D++++ Sbjct: 154 ADMTVSCLEVPIAEA-AGSFGVMEVDEEMRILGFEEKPQQPKHSPGNPEMCL--------------ASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIPAIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMALDSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVL 358
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB2 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS223) GN=glgC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21 Identity = 69/220 (31.36%), Postives = 110/220 (50.00%), Query Frame = 3 Query: 12 ADITVSC--VPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TVSC VP+ ++ A +G+M++D +I+ F EKP+ P + L ASMG Y+F T+ L + L+ + DFG +IIPA ++ HNV A+ F YW D+GT+ SF+ AN+ L YD + P +T LPP K R +D+I+S GC + +V+ S++ R+ S +D++++ Sbjct: 154 ADMTVSCLEVPIAEA-AGSFGVMEVDEEMRILGFEEKPQQPKHSPGNPEMCL--------------ASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIPAIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMALDSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVL 358
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_ACIBL (Glucose-1-phosphate adenylyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glgC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21 Identity = 69/243 (28.40%), Postives = 112/243 (46.09%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKVDRCK------IVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 AD+T++ + +D S +G++ +D + F EKPK +L+ S D K ASMG+Y+F TDVL+ +L N DFG I+P V ++ + +F F D YW D+GT+ +++DANL L F YD P T R PP K + +D+++S GC + +V++ ++ R+ S E +++ I + +R V I G Sbjct: 145 ADVTLATILIDPSETRHFGVVDVDNQSHVNGFVEKPKSTELR-----------SPYDPSKVS--ASMGIYIFNTDVLIPVLLKDAEDPNSKHDFGHNILPKMVGEYKIYSFNFIDENKKEALYWRDVGTLDAYYDANLDLVSVAPVFNLYDKAWPIRTHQRQYPPAKFVFAEQGRMGTALDSVVSMGCIVSGGTVRNCVLSPDVRVNSFSEVDSSILFSHVNVGRHCRIRRSIIDRDVHIPEG 374
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_BRAJA (Glucose-1-phosphate adenylyltransferase OS=Bradyrhizobium japonicum GN=glgC PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21 Identity = 69/247 (27.94%), Postives = 120/247 (48.58%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR--SSYPLSN-DFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 AD+TV C+ M + +S +G+M ID +G I +F EKP P + D +L ASMG+Y+F L + L+ + P SN DFG +IIP VK+ A F+ YW D+GT+ +++ AN+ LT+ + + +D P ++ + PP K R + V +++S GC + S++ S++ R+ S ++ ++M + + +++ +R V I G Sbjct: 154 ADVTVGCLEMPRAESSGFGIMHIDENGWIQEFLEKPADPPPMPGKPDVSL--------------ASMGIYVFDAKFLFDQLKRDAEDPSSNHDFGKDIIPYIVKNGRAIAHQFSTSCVRSGDDPRAYWRDVGTVDAYWAANIDLTDVVPELDLFDRAWPIWSYSEITPPAKFVHDEESRRGQAVSSLVSGGCIISGASLRRSLLFTGVRINSYANVENAVIMPYVNVGRGARLKNVVIDRGVEIPEG 386 The following BLAST results are available for this feature:
BLAST of FC923284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923284 ID=FC923284; Name=FC923284; organism=Citrus clementina; type=EST; length=698bpback to top |