FC923284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_THEAB (Glucose-1-phosphate adenylyltransferase OS=Thermosipho africanus (strain TCF52B) GN=glgC PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21 Identity = 65/226 (28.76%), Postives = 113/226 (50.00%), Query Frame = 3 Query: 21 TVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV-DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIG 686 TV+C+ + S AS +G+M D +II+F EKPK P +AS+G+Y+F+ + +L + S+DFG +IIP ++ V AF F+ YW+D+GTI S++++NL LT F +D YT ++ +PP + D K+ +++IS GC + +V +S++ + G +++++M I + + V IG Sbjct: 148 TVACMEVPLSEASRFGIMVTDLENRIIEFQEKPKQPKST---------------------LASLGIYVFQWSFIREVLIEDAKNDQSSHDFGKDIIPKIIQTERVFAFPFDGYWKDVGTIYSYWESNLELTRPIPPFNIHDENWRIYTHSKEMPPAYIADSTKVKNSLISEGCEIYG-AVSNSVLAQGVEIGKGSIVKNSVIMSNVRIGENCYIENAIIAENVVIG 351
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_THEYD (Glucose-1-phosphate adenylyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glgC PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20 Identity = 67/243 (27.57%), Postives = 121/243 (49.79%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLN-LLRSSYPLSNDFGSEIIPASV-KDHNVQAFLF-------------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKVDRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXGQ 695 A +TV+ P+ AS +G++ D +I F EKPK P + MPD Y+ SMG Y+F D+L++ L+R+ +DFG+ +IP V + V A+ F YW D+GTI ++FDA++ + + FE Y+ P + + PP K+ +I ++II+ G + +++S + S +E VE +D+++M + S++ ++ ++K + G+ Sbjct: 144 AHVTVAARPVALKHASSFGVIITDPDHRIAGFQEKPKDP-------------IPMPDNPDMAYV-SMGNYIFNADILIDALVRAEKKKQHDFGAHVIPDLVGRKCKVYAYDFAKNEIPGIKSYEERGYWRDVGTISAYFDAHMDMLGEKPIFEIYNKMWPIHPARYEGPPVKILDGEIKNSIIAEGALIYGGKIENSFIRSGSIIEKDVEIKDSLIMDDVIIKRNSKLYRVIVDKKNVVYEGE 372
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB9 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS195) GN=glgC PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20 Identity = 69/220 (31.36%), Postives = 109/220 (49.55%), Query Frame = 3 Query: 12 ADITVSC--VPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TVSC VP+ ++ A +G+M++D +I+ F EKP P + L ASMG Y+F T+ L + L+ + DFG +IIPA ++ HNV A+ F YW D+GT+ SF+ AN+ L YD + P +T LPP K R +D+I+S GC + +V+ S++ R+ S +D++++ Sbjct: 154 ADMTVSCLEVPIAEA-AGSFGVMEVDEEMRILGFEEKPLQPKHSPGNPEMCL--------------ASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIPAIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMALDSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVL 358
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SHESW (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain W3-18-1) GN=glgC PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20 Identity = 66/219 (30.14%), Postives = 111/219 (50.68%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASD-YGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TVSC+ + + A+ +G++++D + +I+ F EKP+ P PD + +ASMG Y+F T+ L L+ + DFG +IIP+ ++ HNV A+ F YW D+GT+ SF+ AN+ L YD + P +T LPP K R +D+I+S GC + +V+ S++ R+ S +D++++ Sbjct: 154 ADMTVSCLEVPIAEAAGAFGVIEVDDNMRILGFEEKPQRPK-------------PSPDNPEM-CLASMGNYVFNTEFLFEQLKKDSQNATSDRDFGKDIIPSIIEKHNVFAYPFKSPFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMALDSIVSSGCIISGATVRRSVLFNEVRVCSYSVVEDSVVL 358
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SHEPC (Glucose-1-phosphate adenylyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=glgC PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20 Identity = 66/219 (30.14%), Postives = 111/219 (50.68%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASD-YGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TVSC+ + + A+ +G++++D + +I+ F EKP+ P PD + +ASMG Y+F T+ L L+ + DFG +IIP+ ++ HNV A+ F YW D+GT+ SF+ AN+ L YD + P +T LPP K R +D+I+S GC + +V+ S++ R+ S +D++++ Sbjct: 154 ADMTVSCLEVPIAEAAGAFGVIEVDDNMRILGFEEKPQRPK-------------PSPDNPEM-CLASMGNYVFNTEFLFEQLKKDSQNATSDRDFGKDIIPSIIEKHNVFAYPFKSPFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMALDSIVSSGCIISGATVRRSVLFNEVRVCSYSVVEDSVVL 358
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_THEM4 (Glucose-1-phosphate adenylyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glgC PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 64/226 (28.32%), Postives = 109/226 (48.23%), Query Frame = 3 Query: 21 TVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV-DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIG 686 TV+C+ + S A+ +G+M D +II+F EKPK P +AS+G+Y+F+ + + +L N DFG +IIP + V AF F YW+D+GTI S++++NL LT F +D YT + +PP + D ++ +++IS GC + V +S++ + GV +++++M I + + V IG Sbjct: 148 TVACMEVPLSEANRFGIMVTDLENRIIEFQEKPKFPKST---------------------LASLGIYVFQWNFIREVLMEDAKDENSTHDFGKDIIPKIINTKRVYAFPFEGYWKDVGTIYSYWESNLELTRPIPPFNIHDENWKIYTHSEEMPPAYISDDARVKNSLISEGCEIYG-EVYNSVLAQGVEVGEGVIIKNSVVMSRVRIGNNCFIENAIIAENVVIG 351
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_DEIRA (Glucose-1-phosphate adenylyltransferase OS=Deinococcus radiodurans GN=glgC PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 67/249 (26.91%), Postives = 117/249 (46.99%), Query Frame = 3 Query: 9 KADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKD-HNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 +AD+T++ PM S+A +G+M++D ++ +F EK P Q D +L SMG Y+F L LL +S DFG +IP ++ D ++VQA+ F N YW D+GT+ ++F+AN+ L +F+ Y+P P TS+ F PP K + + ++I++ G + +V+ S++G R S + ++ S + ++ ++ V I G Sbjct: 148 RADVTIAAYPMPQSQAHQFGVMQVDERWRVTEFHEKVPDPPTIPGQADLSL--------------TSMGNYIFSRRALEELLEASISGQETGYDFGHNVIPRALSDGYHVQAYDFHKNPIPGQERPNTYWRDVGTLDAYFEANMDLVSVNPEFDIYNPEWPLRTSSEFSPPAKFVHESEGRKGQAFNSIMAGGAIISGGTVRDSVLGRNVRTHSYSLVESCVLFDDVQVGRHSHLRRVIVDKDVVIPPG 382
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_CLOTH (Glucose-1-phosphate adenylyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=glgC PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 65/234 (27.78%), Postives = 115/234 (49.15%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKD-HNVQAFLFNDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYT-----SARFLPPTKVDRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIG 686 AD T+S + + AS YG+M +G+I +F EKP+ P +ASMGVY+F +VL L + ++DFG IIP +K+ ++ A+ FN YW D+GTI++++++N+ L + +F +DP YT A ++ PT + +I++ GC + SV++S++ + G E D+++M ++I + +V +G Sbjct: 147 ADATISVINVPWEEASRYGIMNTYENGKIYEFEEKPQNPKSN---------------------LASMGVYIFNWEVLKEYLIRDDQNEESAHDFGKNIIPMMLKEGRSMWAYKFNGYWRDVGTIQAYWESNMDLISRVPEFNLFDPAWKIYTPNPVKPAHYIGPTG----SVKKSIVAEGCMIYG-SVRNSVLFPGVYVSEGAEIVDSIVMSDSVIGENTQIYKCIIGEEVKVG 354
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHOP5 (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=glgC PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 67/247 (27.13%), Postives = 113/247 (45.75%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFN-----------DYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKVDRCKI------VDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 A +TV C+ + AS +G+M +D + QI+ F EKP P +MPD +ASMG+Y+F T L LR + S+DFG +IIP VK A F+ YW D+GT+ +++ AN+ LT+ + + YD P +T PP K K+ +++S GC + ++ +++ R+ S + +++ E+ +++ +R V I G Sbjct: 154 AHVTVGCLEVPRKEASGFGVMHVDANDQILSFIEKPAHPP-------------AMPDKPDMA-LASMGIYVFETKFLFEELRRDAADKNSSHDFGKDIIPHIVKHGKAVAHRFDRSCIRSHAESASYWRDVGTVDAYWAANIDLTDIVPQLDLYDHNWPIWTYGEITPPAKFVHDKVGRRGLATSSLVSGGCIISGSTLTQTLLFTGVRIHSFSTIEQAVILPYVEVGRACELKNVVIDRGVRIPDG 386
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHILO (Glucose-1-phosphate adenylyltransferase OS=Rhizobium loti GN=glgC PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 66/247 (26.72%), Postives = 114/247 (46.15%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 AD+TV C+ + A+ +G+M +D II F EKP P +P F +ASMG+Y+F+T L+ LR S DFG +IIP V+ A F YW D+GT+ ++++AN+ LT+ + + YD P +T A PP K R V +++S C + +++ S++ +R+ S ++ +M+ + +++ ++ + V I G Sbjct: 155 ADVTVGCLEVPRMEATGFGVMHVDAKDNIIAFVEKPADPP-------------GIPGNPDFA-LASMGIYVFKTKFLMEQLRRDAAEPGSSRDFGKDIIPYIVQHGKAIAHRFTKSCVRSTAENEAYWRDVGTVDAYWEANIDLTDITPELDLYDRDWPIWTYAELKPPAKFVHDEDGRRGSAVSSLVSGDCIVSGATLKKSLIFTGARINSYSTLEEVVMLPDVHVGRNAKLKRVVIDHGVRIPEG 387 The following BLAST results are available for this feature:
BLAST of FC923284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923284 ID=FC923284; Name=FC923284; organism=Citrus clementina; type=EST; length=698bpback to top |