FC923284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHIME (Glucose-1-phosphate adenylyltransferase OS=Rhizobium meliloti GN=glgC PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.684e-19 Identity = 69/225 (30.67%), Postives = 106/225 (47.11%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGL-SMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIV--GVR----SRLESGVEFQD 605 AD+TV C+ + A+ +G+M +D + +II F EKP P G+ PD +ASMG+Y+F T L+++LR + S DFG +IIP V+ A F YW D+GTI +++ AN+ LT + + YD P +T + PP K R +++S C + ++ S++ GVR SRLE+ V D Sbjct: 154 ADVTVGCLEVPRMEATGFGVMHVDNADRIIAFVEKPADPP-----------GIPGNPDMA----LASMGIYVFHTKFLMDMLRRDAADPKSSRDFGKDIIPYIVEHGKAVAHRFTHSCVRSDFEREAYWRDVGTIDAYWQANIDLTHITPELDIYDSTWPIWTFSEIKPPAKFVHDDENRRGSATSSLVSGDCIISGAALNRSLLFTGVRVNSYSRLENAVVLPD 363
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHOSR (Glucose-1-phosphate adenylyltransferase OS=Rhodococcus sp. (strain RHA1) GN=glgC PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 66/244 (27.05%), Postives = 113/244 (46.31%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVKDHNVQAFLFND------------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTK-VDRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXGQ 695 A +TV+ + + S A +G + D SG+I+QF EKP P PD + ASMG Y+F T VL++ +R+ S+ D G +IIPA V+ + F D YW D+GT+ +F+DA++ L F Y+ R P L P K V ++++ GC L +V++S++ ++SG + +++M + + + ++ V +G G+ Sbjct: 146 AGVTVAGIRVPRSEAFAFGCIDSDESGRIVQFLEKPAHPP-------------GTPDDPNMTF-ASMGNYVFTTKVLVDAIRADSENSDSDHDMGGDIIPALVEAGEASVYDFKDNIVPGATDRDRGYWRDVGTLDAFYDAHMDLVSVHPIFNLYNRRWPIRGETENLAPAKFVQGGLAQESVVGAGCILSAATVRNSVLSSNVMVDSGATVEGSVLMPGVRIGKGAVVRRAILDKNVVVGDGE 375
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHOOB (Glucose-1-phosphate adenylyltransferase OS=Rhodococcus opacus (strain B4) GN=glgC PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 66/244 (27.05%), Postives = 113/244 (46.31%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVKDHNVQAFLFND------------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTK-VDRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXGQ 695 A +TV+ + + S A +G + D SG+I+QF EKP P PD + ASMG Y+F T VL++ +R+ S+ D G +IIPA V+ + F D YW D+GT+ +F+DA++ L F Y+ R P L P K V ++++ GC L +V++S++ ++SG + +++M + + + ++ V +G G+ Sbjct: 146 AGVTVAGIRVPRSEAFAFGCIDSDESGRIVQFLEKPAHPP-------------GTPDDPNMTF-ASMGNYVFTTKVLVDAIRADSENSDSDHDMGGDIIPALVEAGEASVYDFKDNVVPGATDRDRGYWRDVGTLDAFYDAHMDLVSVHPIFNLYNRRWPIRGETENLAPAKFVQGGLAQESVVGAGCILSAATVRNSVLSSNVMVDSGATVEGSVLMPGVRIGKGAVVRRAILDKNVVVGDGE 375
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHIRD (Glucose-1-phosphate adenylyltransferase OS=Rhizobium radiobacter GN=glgC PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 67/220 (30.45%), Postives = 103/220 (46.82%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIV--GVR----SRLESGV 593 AD+T+ C+ + A+ +G+M ++ +II F EKP P +P F +ASMG+Y+F T L+ +R + S DFG +IIP V+ A F D YW D+GTI +++ AN+ LT+ + YD P +T A PP K R V +++S C + ++ S++ GVR SRLE+ V Sbjct: 154 ADVTIGCLEVPRMEATGFGVMHVNEKDEIIDFIEKPADPP-------------GIPGNEGFA-LASMGIYVFHTKFLMEAVRRDAADPTSSRDFGKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPPAKFVHDDEDRRGSAVSSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAV 359
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_FRAP2 (Glucose-1-phosphate adenylyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=glgC PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 66/223 (29.60%), Postives = 105/223 (47.09%), Query Frame = 3 Query: 21 TVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPK--GPDLKGM--QCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFN-----------DYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTS------ARFLPPTKVDRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 TV CV + + A +G+M ID +I F EKPK P + G +C ASMG+Y+F +D L +LL ++ S+DFG +IIP V ++ A F+ YW D+GTI +F++ANL L + YD P +T+ A+F+P K + I + + S GC + + S++ + R+ +G E ++M Sbjct: 158 TVGCVEIAEEEAYAFGIMGIDEDRKITSFIEKPKKNAPTIPGTTDRC-----------------YASMGIYIFNSDYLYDLLEEDIANKESSHDFGKDIIPRVVSENQALAHPFSMSCVPRGEGIEPYWRDVGTIDAFWEANLDLAANMPELNIYDKDWPVWTAQEQLPPAKFVPDRKGNHGVITNTLTSGGCIVLGSQISKSLMFSKVRVSAGCEIDQCVIM 363
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_ENTS8 (Glucose-1-phosphate adenylyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=glgC PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 65/222 (29.28%), Postives = 101/222 (45.50%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV--DRC----KIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 A TV+C+P+ + A +G+M +D + ++I F EKP P M CD T +ASMG+Y+F D L LL + S+DFG +IIP A F YW D+GT+++++ ANL L + + YD P T LPP K DR +++++S GC + V S++ R R+ S +++ Sbjct: 161 ARCTVACLPVPVAEARAFGVMAVDENSKVIDFVEKPANPP--SMPCDDTKA------------LASMGIYIFDADYLYELLEEDDENESSSHDFGKDIIPKVTYSGEAYAHPFPLSCVQSDPNAEPYWRDVGTLEAYWKANLDLASVTPELDMYDQDWPIRTHMESLPPAKFVQDRSGSHGMTLNSLVSGGCIISGSVVVQSVLFPRVRVNSFCNIDSAVLL 368
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SHEON (Glucose-1-phosphate adenylyltransferase OS=Shewanella oneidensis GN=glgC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 68/219 (31.05%), Postives = 109/219 (49.77%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASD-YGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TVSC+ + + A+ +G+M++D +I+ F EKP+ P C P+ +ASMG Y+F T+ L L+ + DFG +IIP+ ++ H V A+ F YW D+GT+ SF+ AN+ L YD + P +T LPP K R VD+IIS GC + +V+ S++ R+ S +D++++ Sbjct: 154 ADMTVSCLEVPVAEAAGAFGVMEVDDDMRILGFEEKPQLPK----HCPGN------PEKC----LASMGNYVFNTEFLFEQLKKDAQNAESDRDFGKDIIPSIIEKHKVFAYPFKSAFPNEQAYWRDVGTLDSFWLANMELLSPTPALNLYDAKWPIWTYQEQLPPAKFVFDDDDRRGMAVDSIISGGCIISGATVRRSVLFNEVRVCSYSVVEDSVVL 358
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SALTY (Glucose-1-phosphate adenylyltransferase OS=Salmonella typhimurium GN=glgC PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 68/223 (30.49%), Postives = 105/223 (47.09%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP-DAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV--DRC----KIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 A TV+C+P+ A+ +G+M +D S +II F EKP P +MP DA K +ASMG+Y+F D L LL + S+DFG +IIP ++ A F YW D+GT+++++ ANL L + + YD P T LPP K DR +++++S GC + V S++ R R+ S +++ Sbjct: 161 ARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANPP-------------AMPGDASKS--LASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLASVTPELDMYDQNWPIRTHMESLPPAKFVQDRSGSHGMTLNSLVSGGCIISGSVVVQSVLFPRVRINSFCNIDSAVLL 368
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SALSV (Glucose-1-phosphate adenylyltransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=glgC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 68/223 (30.49%), Postives = 105/223 (47.09%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP-DAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV--DRC----KIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 A TV+C+P+ A+ +G+M +D S +II F EKP P +MP DA K +ASMG+Y+F D L LL + S+DFG +IIP ++ A F YW D+GT+++++ ANL L + + YD P T LPP K DR +++++S GC + V S++ R R+ S +++ Sbjct: 161 ARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANPP-------------AMPGDASKS--LASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLASVTPELDMYDQNWPIRTHMESLPPAKFVQDRSGSHGMTLNSLVSGGCIISGSVVVQSVLFPRVRINSFCNIDSAVLL 368
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SALPK (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=glgC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 68/223 (30.49%), Postives = 105/223 (47.09%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP-DAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV--DRC----KIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 A TV+C+P+ A+ +G+M +D S +II F EKP P +MP DA K +ASMG+Y+F D L LL + S+DFG +IIP ++ A F YW D+GT+++++ ANL L + + YD P T LPP K DR +++++S GC + V S++ R R+ S +++ Sbjct: 161 ARCTVACMPVPIKEATAFGVMAVDESDKIIDFVEKPANPP-------------AMPGDASKS--LASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLASVTPELDMYDQNWPIRTHMESLPPAKFVQDRSGSHGMTLNSLVSGGCIISGSVVVQSVLFPRVRINSFCNIDSAVLL 368 The following BLAST results are available for this feature:
BLAST of FC923284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923284 ID=FC923284; Name=FC923284; organism=Citrus clementina; type=EST; length=698bpback to top |