FC923288

Overview
NameFC923288
Unique NameFC923288
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_VIBCH (Molybdenum cofactor biosynthesis protein C OS=Vibrio cholerae GN=moaC PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.477e-28
Identity = 68/132 (51.52%), Postives = 84/132 (63.64%), Query Frame = 2
Query:  296 LTHIGRTGEAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQLAKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCKAASR 691
            LTHI  +GEA MVDVS K ++ R A A   V +  +   L+L+ Q  KGDV + A+IAGI  AK T  LIPLCH + L+ V V L    +  SV IE     SGKTGVEMEA+TA +VA LT+YDMCKA  +
Sbjct:    5 LTHINASGEANMVDVSNKADTVREARAEAYVRMAPETLQLILSGQHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLSKVEVQLEALPEQSSVRIESLCKLSGKTGVEMEALTAASVAALTIYDMCKAVQK 136          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_VIBC3 (Molybdenum cofactor biosynthesis protein C OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=moaC PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.477e-28
Identity = 68/132 (51.52%), Postives = 84/132 (63.64%), Query Frame = 2
Query:  296 LTHIGRTGEAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQLAKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCKAASR 691
            LTHI  +GEA MVDVS K ++ R A A   V +  +   L+L+ Q  KGDV + A+IAGI  AK T  LIPLCH + L+ V V L    +  SV IE     SGKTGVEMEA+TA +VA LT+YDMCKA  +
Sbjct:    5 LTHINASGEANMVDVSNKADTVREARAEAYVRMAPETLQLILSGQHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLSKVEVQLEALPEQSSVRIESLCKLSGKTGVEMEALTAASVAALTIYDMCKAVQK 136          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_PSYIN (Molybdenum cofactor biosynthesis protein C OS=Psychromonas ingrahamii (strain 37) GN=moaC PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.477e-28
Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = 2
Query:  299 THIGRTGEAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQLAKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCKAASR 691
            THI + G+A MVDV+ K  +QR AIA   V +  +   L+L  Q  KGDV + A+IAGI  AK TS +IPLCH + LT V V+L+   +   V I+     SGKTGVEMEA+TA +VA LT+YDMCKA  +
Sbjct:    6 THINQDGKANMVDVTDKNTTQRQAIAQAYVEMKAETLALILNGQHHKGDVFATARIAGIMAAKKTSDIIPLCHPLALTKVEVELVAEPEFNRVRIQSLCKLSGKTGVEMEALTAASVAALTIYDMCKAIQK 136          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_CHLSY (Molybdenum cofactor biosynthesis protein C OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=moaC PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28
Identity = 60/132 (45.45%), Postives = 87/132 (65.91%), Query Frame = 2
Query:  296 LTHIGRTGEAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQLAKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCKAASR 691
            LTH+   G A+MVDV  K  + R A+A  +V++  +   L++  +L KGDVL+VA++AGI  AK T+ LIPLCH + L+H  V    +    +++IE      G+TGVEMEA+TAV++A LT+YDMCKA  +
Sbjct:    8 LTHLDAAGHARMVDVGDKAVTAREAVARGRVVMQPETLALIMDGKLPKGDVLAVARVAGIMAAKRTAELIPLCHLLNLSHASVQFTPDPASNALEIEATVRCQGQTGVEMEALTAVSIAALTIYDMCKAVDK 139          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_CHLAA (Molybdenum cofactor biosynthesis protein C OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=moaC PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28
Identity = 60/132 (45.45%), Postives = 87/132 (65.91%), Query Frame = 2
Query:  296 LTHIGRTGEAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQLAKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCKAASR 691
            LTH+   G A+MVDV  K  + R A+A  +V++  +   L++  +L KGDVL+VA++AGI  AK T+ LIPLCH + L+H  V    +    +++IE      G+TGVEMEA+TAV++A LT+YDMCKA  +
Sbjct:    8 LTHLDAAGHARMVDVGDKAVTAREAVARGRVVMQPETLALIMDGKLPKGDVLAVARVAGIMAAKRTAELIPLCHLLNLSHASVQFTPDPASNALEIEATVRCQGQTGVEMEALTAVSIAALTIYDMCKAVDK 139          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_THEPX (Molybdenum cofactor biosynthesis protein C OS=Thermoanaerobacter sp. (strain X514) GN=moaC PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.275e-27
Identity = 61/132 (46.21%), Postives = 88/132 (66.67%), Query Frame = 2
Query:  296 LTHIGRTGEAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQLAKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCKAASR 691
            LTHI   G A+MVDVS K+ ++R A+A   + +  +    +    + KGDVL+VA++AGI  AK+TS +IP+CH I +T   +   L+ ++  +DI+    + G+TGVEMEA+TAVTVA LT+YDMCKA  R
Sbjct:    3 LTHINEEGRARMVDVSDKDETKREAVAIGSIYMKSETLRRIHEGTIKKGDVLAVAQVAGIMAAKNTSHMIPMCHPIMITGCDISFSLDFENSKIDIKAVVKTVGQTGVEMEALTAVTVAALTIYDMCKAIDR 134          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_XANP2 (Molybdenum cofactor biosynthesis protein C OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=moaC PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27
Identity = 64/132 (48.48%), Postives = 88/132 (66.67%), Query Frame = 2
Query:  296 LTHIGRTGEAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQLAKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCKAASR 691
            LTHI   G A+MVDVS K  + R A+A  +V +     +L+L+    KGDV+ VA++AGI  AK T  LIPLCH + LT V V+++ +S    + +   A ++G+TGVEMEA+TAV+VA LT+YDM KAA R
Sbjct:    4 LTHIDAEGSARMVDVSDKAATTREALAEGRVAMAPATLELILSGNAKKGDVMGVARLAGIMAAKRTHELIPLCHPLMLTKVEVEVVPDSALPGLHVTARAKTTGQTGVEMEALTAVSVACLTIYDMAKAADR 135          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_RHISN (Molybdenum cofactor biosynthesis protein C OS=Rhizobium sp. (strain NGR234) GN=moaC PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27
Identity = 67/136 (49.26%), Postives = 86/136 (63.24%), Query Frame = 2
Query:  284 STPGLTHIGRTGEAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQLAKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCKAASR 691
            S P LTHI   GEA MVDV  K  ++R A A   V +  +   L+L     KGDV+  A++AGI  AK TS+LIPLCH + LT V VD++ +     + IE  A   G+TGVEMEA+TAV++A LT+YDM KAA R
Sbjct:    3 SGPRLTHIDSAGEAHMVDVGDKAETERVAAAEGFVRMRPETLALILEGNAKKGDVIGTARLAGIMAAKQTSNLIPLCHPLMLTKVSVDIVPDDALPGLRIEAMAKLKGRTGVEMEALTAVSIACLTIYDMAKAADR 138          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_POLSQ (Molybdenum cofactor biosynthesis protein C OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=moaC PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27
Identity = 63/132 (47.73%), Postives = 86/132 (65.15%), Query Frame = 2
Query:  296 LTHIGRTGEAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQLAKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCKAASR 691
            LTH   +G+A MV+V  K  + R AIA  K+ +  + F +V      KGDVL +A+IAGI  +K T+ LIPLCH + LTHV ++  L+S   ++  +  A ++G TGVEMEA+TAV VA LT+YDMCKA  R
Sbjct:    4 LTHFDDSGQAHMVNVGDKPATHRIAIATGKITMLLETFKMVETGNHKKGDVLGIARIAGIQASKRTADLIPLCHPLALTHVSLEFRLDSTTSTISCKVRAETTGPTGVEMEALTAVQVALLTIYDMCKAVDR 135          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_BURM1 (Molybdenum cofactor biosynthesis protein C OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=moaC PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27
Identity = 66/133 (49.62%), Postives = 82/133 (61.65%), Query Frame = 2
Query:  293 GLTHIGRTGEAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQLAKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCKAASR 691
            GLTH    G A MVDV  K+ +QR A+A   + +    F+L+   +  KGDVL VA+IA I GAK T+ LIPLCH + LT V VD  L+     V    +  + G+TGVEMEA+TAV V  LTVYDMCKA  R
Sbjct:    3 GLTHFDAAGHAHMVDVGGKQETQRIAVARGTIRMLPATFELIRDGKAKKGDVLGVARIAAIQGAKRTADLIPLCHPLALTRVAVDFELDDALPGVHCIAQVETFGRTGVEMEALTAVQVGLLTVYDMCKAVDR 135          
The following BLAST results are available for this feature:
BLAST of FC923288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
MOAC_VIBCH7.477e-2851.52Molybdenum cofactor biosynthesis protein C OS=Vibr... [more]
MOAC_VIBC37.477e-2851.52Molybdenum cofactor biosynthesis protein C OS=Vibr... [more]
MOAC_PSYIN7.477e-2850.38Molybdenum cofactor biosynthesis protein C OS=Psyc... [more]
MOAC_CHLSY9.766e-2845.45Molybdenum cofactor biosynthesis protein C OS=Chlo... [more]
MOAC_CHLAA9.766e-2845.45Molybdenum cofactor biosynthesis protein C OS=Chlo... [more]
MOAC_THEPX1.275e-2746.21Molybdenum cofactor biosynthesis protein C OS=Ther... [more]
MOAC_XANP22.176e-2748.48Molybdenum cofactor biosynthesis protein C OS=Xant... [more]
MOAC_RHISN2.176e-2749.26Molybdenum cofactor biosynthesis protein C OS=Rhiz... [more]
MOAC_POLSQ2.176e-2747.73Molybdenum cofactor biosynthesis protein C OS=Poly... [more]
MOAC_BURM12.176e-2749.62Molybdenum cofactor biosynthesis protein C OS=Burk... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31703C02EF StrClemenN Citrus clementina cDNA clone C31703C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923288 ID=FC923288; Name=FC923288; organism=Citrus clementina; type=EST; length=696bp
GATGGTGGAGGAATTCAATTTACACAGGTTGAGCTCCTCGTTTCTGACTC
AATGACCTTAAGTTGCCATCATGATTCTTCGTCGACTTGCAGCTGCATTT
CCTCACTCAAGAAGGTTCTTTAGTAGTAACAGTAACCATGATTTTGCAAG
TGCAATTGTGGATCTCAACAAGGAGATGGAATCAATCTTTGGTGAACCTC
CTACTTCAAATGGGTTTTCTGGTTCTGTAAGTAATGATTTCATGGCTCAA
GAAGCTCAGTTGACATCTCAAAAGATTTGTGATAGCACACCTGGCCTGAC
CCACATTGGCCGGACAGGAGAAGCACAAATGGTGGATGTCTCTCCAAAAG
AAAATAGTCAAAGAACTGCCATTGCTAATTGCAAGGTAATTCTGGGCAAA
AAGGTGTTTGATCTGGTCTTAGCAAACCAATTGGCCAAGGGGGATGTCCT
TAGTGTAGCAAAAATAGCAGGCATTAGTGGAGCAAAGCATACCAGCAGTC
TCATCCCACTATGTCACAATATCACCTTAACTCATGTTCGCGTTGATCTT
ATGCTGAACTCTAAGGATTTTAGTGTAGACATTGAAGGGGAAGCAGTGTC
ATCAGGGAAAACTGGGGTTGAAATGGAAGCTATGACGGCTGTAACTGTTG
CCGGTCTAACAGTCTATGATATGTGCAAGGCTGCTTCAAGGATATT
back to top