FC923288

Overview
NameFC923288
Unique NameFC923288
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_XANC8 (Molybdenum cofactor biosynthesis protein C OS=Xanthomonas campestris pv. campestris (strain 8004) GN=moaC PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15
Identity = 57/141 (40.43%), Postives = 71/141 (50.35%), Query Frame = 2
Query:  296 LTHIGRTGEAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQL--AKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSS--------GKTGVEMEAMTAVTVAGLTVYDMCKAAS 688
            LTH+   G   MVDVS K+ + R+A A  +V     V   + AN L  AKG ++  A IAG    K T  LIP CH + +   R         F +D  G  V           +TGVEMEA+T  +VA LTVYDMCKA S
Sbjct:   10 LTHLDDAGLPTMVDVSDKQVTARSATAESRVHFPAAVAAQLRANGLRSAKGGIVETAVIAGTMAVKRTHELIPFCHPLPIDGCR---------FEIDWAGAQVLQIVCTVRCVHRTGVEMEALTGASVAALTVYDMCKALS 141          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_XANCB (Molybdenum cofactor biosynthesis protein C OS=Xanthomonas campestris pv. campestris (strain B100) GN=moaC PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15
Identity = 57/141 (40.43%), Postives = 71/141 (50.35%), Query Frame = 2
Query:  296 LTHIGRTGEAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQL--AKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSS--------GKTGVEMEAMTAVTVAGLTVYDMCKAAS 688
            LTH+   G   MVDVS K+ + R+A A  +V     V   + AN L  AKG ++  A IAG    K T  LIP CH + +   R         F +D  G  V           +TGVEMEA+T  +VA LTVYDMCKA S
Sbjct:   10 LTHLDDAGLPTMVDVSDKQVTARSATAESRVHFPAAVAAQLRANGLRSAKGGIVETAVIAGTMAVKRTHELIPFCHPLPIDGCR---------FEIDWAGAHVLQIVCTVRCVHRTGVEMEALTGASVAALTVYDMCKALS 141          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_METHJ (Probable molybdenum cofactor biosynthesis protein C OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=moaC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.617e-14
Identity = 47/134 (35.07%), Postives = 71/134 (52.99%), Query Frame = 2
Query:  290 PGLTHIGRTGEAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQLAKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCKAASR 691
            P  TH+     A+MVDVS K    R A+A   + L       +    + KG+VL+ A++A     K T  LIP+CH I +    +D+  +     +      +S+GKTGVEMEA+  V+ A LT++DM K+A +
Sbjct:    2 PVFTHLD-DDRARMVDVSAKGEVYRKAVATGTITLRPDTLSAIRDGTVVKGNVLATARVAATLAIKDTPRLIPMCHAIPVH--GIDITFDYTKTGITATVTVISAGKTGVEMEALVGVSTALLTIWDMVKSAEK 132          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOCS1_DICDI (Molybdenum cofactor biosynthesis protein 1 OS=Dictyostelium discoideum GN=mocs1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14
Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 2
Query:  299 THIGRTGEAQ-MVDVSPKENSQRTAIANCKVILGKKVFDLVLA----------NQLAK--------GDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCKAASR 691
            +HI + G+   MVD+S K  ++RTA A   +     V   +L           N ++K        G V + + +AG    K+TS+LIP CH I +   ++++ +     SV ++     SGKTGVEMEA+T  T+  LT+YDMCKA S+
Sbjct:  458 SHITKDGKLPTMVDISDKIITKRTAHAQSILEFPSNVLSQLLNLEKNNDIDNDNNISKNKEIVSKKGPVFATSIVAGTMAVKNTSNLIPFCHPIPIESCKIEITIIDST-SVKVDCIVSMSGKTGVEMEALTGATITSLTIYDMCKALSK 606          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_THEAC (Probable molybdenum cofactor biosynthesis protein C OS=Thermoplasma acidophilum GN=moaC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13
Identity = 42/117 (35.90%), Postives = 68/117 (58.12%), Query Frame = 2
Query:  329 MVDVSPKENSQRTAIANCKVILGKKVFDLVLANQLAKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCK 679
            M+++S K  S RTA A  ++ L +     +   ++ KGDVL V+++ G   AK+T   IP CHNI +  V VD   N  +  V++     ++ KTG+EMEA++ V+ A + ++DM K
Sbjct:    1 MINISEKAISARTATATGRIHLRRSTIQAIREKKVKKGDVLEVSRVVGTQHAKNTFLQIPYCHNIPIEGVDVD--FNVGEDYVEVSCTLTTTYKTGIEMEAISCVSGALINIWDMVK 115          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_THEVO (Probable molybdenum cofactor biosynthesis protein C OS=Thermoplasma volcanium GN=moaC PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13
Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 2
Query:  320 EAQMVDVSPKENSQRTAIANCKVILGKKVFDLVLANQLAKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCK 679
            +  M+++S K+   R A A  ++ L K+    +  NQ+ KG+V+ +++  G   AK+T   IP CHNI +  V VD  L      V++     +S KTG+EMEA+  V  A L ++DM K
Sbjct:    5 DGNMINISRKDVVARKATAVGRIYLRKETITAIKNNQVKKGNVIEISRAVGTMYAKNTFLQIPYCHNIPIEGVDVDFSLGEN--YVEVTCSTTTSYKTGIEMEAINCVNGALLNIWDMVK 122          
BLAST of FC923288 vs. ExPASy Swiss-Prot
Match: MOAC_METKA (Probable molybdenum cofactor biosynthesis protein C OS=Methanopyrus kandleri GN=moaC PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11
Identity = 46/124 (37.10%), Postives = 69/124 (55.65%), Query Frame = 2
Query:  329 MVDVSPKENSQRTAIANCKVILGKKVFDLVLANQL---AKGDVLSVAKIAGISGAKHTSSLIPLCHNITLTHVRVDLMLNSKDFSVDIEGEAVSSGKTGVEMEAMTAVTVAGLTVYDMCKAASR 691
            MVDV+ K+   R A A+  + L +   + V + +     KGD + VAK+A I   K T  L+P CH I +T V VD+ +   +  V +     S GKTGVEM+A+T + V  +T++DM K A +
Sbjct:   10 MVDVTGKKEEIRIAEASGFLRLTEDGVNAVKSGESHPQGKGDPIEVAKVAAILAVKKTPELVPHCHPIKITGVDVDVEV--LEDGVKMSVRVKSEGKTGVEMDALTGLVVGLVTLWDMVKYAEK 131          
The following BLAST results are available for this feature:
BLAST of FC923288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
MOAC_XANC81.120e-1540.43Molybdenum cofactor biosynthesis protein C OS=Xant... [more]
MOAC_XANCB1.463e-1540.43Molybdenum cofactor biosynthesis protein C OS=Xant... [more]
MOAC_METHJ1.617e-1435.07Probable molybdenum cofactor biosynthesis protein ... [more]
MOCS1_DICDI2.112e-1434.67Molybdenum cofactor biosynthesis protein 1 OS=Dict... [more]
MOAC_THEAC1.788e-1335.90Probable molybdenum cofactor biosynthesis protein ... [more]
MOAC_THEVO6.794e-1335.00Probable molybdenum cofactor biosynthesis protein ... [more]
MOAC_METKA2.186e-1137.10Probable molybdenum cofactor biosynthesis protein ... [more]

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Properties
Property NameValue
Genbank descriptionC31703C02EF StrClemenN Citrus clementina cDNA clone C31703C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923288 ID=FC923288; Name=FC923288; organism=Citrus clementina; type=EST; length=696bp
GATGGTGGAGGAATTCAATTTACACAGGTTGAGCTCCTCGTTTCTGACTC
AATGACCTTAAGTTGCCATCATGATTCTTCGTCGACTTGCAGCTGCATTT
CCTCACTCAAGAAGGTTCTTTAGTAGTAACAGTAACCATGATTTTGCAAG
TGCAATTGTGGATCTCAACAAGGAGATGGAATCAATCTTTGGTGAACCTC
CTACTTCAAATGGGTTTTCTGGTTCTGTAAGTAATGATTTCATGGCTCAA
GAAGCTCAGTTGACATCTCAAAAGATTTGTGATAGCACACCTGGCCTGAC
CCACATTGGCCGGACAGGAGAAGCACAAATGGTGGATGTCTCTCCAAAAG
AAAATAGTCAAAGAACTGCCATTGCTAATTGCAAGGTAATTCTGGGCAAA
AAGGTGTTTGATCTGGTCTTAGCAAACCAATTGGCCAAGGGGGATGTCCT
TAGTGTAGCAAAAATAGCAGGCATTAGTGGAGCAAAGCATACCAGCAGTC
TCATCCCACTATGTCACAATATCACCTTAACTCATGTTCGCGTTGATCTT
ATGCTGAACTCTAAGGATTTTAGTGTAGACATTGAAGGGGAAGCAGTGTC
ATCAGGGAAAACTGGGGTTGAAATGGAAGCTATGACGGCTGTAACTGTTG
CCGGTCTAACAGTCTATGATATGTGCAAGGCTGCTTCAAGGATATT
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