FC923324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.965e-34 Identity = 83/227 (36.56%), Postives = 131/227 (57.71%), Query Frame = 2 Query: 44 TATMSEGEDAVRRRNAMTEYRKKLLQHK----EIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 T E ++ N + K+ LQ K E+ESR+ + +ENL+ K E +L ++ I+G V+ + +++VK+S+GP ++V V+ + L G RV L+ TLT++ LP D M ++ NV Y +GGL Q++E+RE +ELPL +PELF +VGI+PPKG+LLYGPPGTGKTL + ++A+ +A F++VV S ++ K+ Sbjct: 19 TEEFKEEKEINDNSNLKNDLLKEELQEKARIAELESRILKLELEKKELERENLQLMK-ENEILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKF 244
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.965e-34 Identity = 77/192 (40.10%), Postives = 117/192 (60.94%), Query Frame = 2 Query: 113 LLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 LL +E + +K A+++ +K +D L+ +G + +D IV +S GP Y VG S VDK++L G +++ L+++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PEL+ +GIKPPKGV+LYG PGTGKTL + ++A++ A FL+VV S +I KY Sbjct: 75 LLMEEEFVANQERLKPQEEKAEEDRSKVDD----LRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKY 262
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.965e-34 Identity = 77/192 (40.10%), Postives = 117/192 (60.94%), Query Frame = 2 Query: 113 LLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 LL +E + +K A+++ +K +D L+ +G + +D IV +S GP Y VG S VDK++L G +++ L+++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PEL+ +GIKPPKGV+LYG PGTGKTL + ++A++ A FL+VV S +I KY Sbjct: 75 LLMEEEFVANQERLKPQEEKAEEDRSKVDD----LRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKY 262
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.171e-33 Identity = 74/186 (39.78%), Postives = 115/186 (61.83%), Query Frame = 2 Query: 131 IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 ++ +VRS+ + + +KE ++++ L S I VL +D+ R++VK+S+GP +V + VD L G V L+ TI+ LP DP+V M E+ V + VGGL +QIRE+ E++ LP+ NP LF +GI PPKGVLL+GPPGTGKTL + ++A +A F++VV S +++K+ Sbjct: 28 LKDKVRSLTKEKISLQKELEYYKNEITKLLSPPYIEAVVLEVIDDNRVVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKF 213
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.171e-33 Identity = 73/195 (37.44%), Postives = 124/195 (63.59%), Query Frame = 2 Query: 107 KKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 K+L +H E I+ + +K+ R+ K+E + ++++K +QSV +IG+ + +D IV++S+G YVV S +D+EKL + V L + ++ LP E D + + + +V+Y+ VGGL Q +E+RE++ELPL +L+ ++GI PP+GVLLYGPPGTGKT+ ++A++ A+F++V S + KY Sbjct: 46 KRLQRHLEYIQLQEEYIKDEQRSLKRELVRAQEEIKRIQSVPLVIGQFMEAIDQNTGIVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKY 240
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.529e-33 Identity = 74/195 (37.95%), Postives = 120/195 (61.54%), Query Frame = 2 Query: 125 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 +E++ V +NLR + + N+ ++L+ LQ G +GEV++P+D ++++VK ++VV VD +T+ RV L + T+ + LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTL + ++A + + F++V S ++ K+ Sbjct: 25 EELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKF 219
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.529e-33 Identity = 70/179 (39.11%), Postives = 115/179 (64.25%), Query Frame = 2 Query: 152 VKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 +KE+ ++ K+E + ++++K +QSV +IG+ L +D IV +++G YVV S +D+E L V L + ++ LP E D + + ++ +VSY+ VGGL Q +E+RE++ELPL +L+ ++GI PP+GVLLYGPPGTGKT+ ++A++ ANF++VV S + KY Sbjct: 30 IKEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKY 208
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.997e-33 Identity = 71/207 (34.30%), Postives = 123/207 (59.42%), Query Frame = 2 Query: 68 DAVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 D + + T+Y+K + +E + +K+ R KKE+ ++++K +QSV +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + ++ +V YS +GG+ Q +E+RE++ELPL + EL+ ++GI+PP+GVL+YGPPG GKT+ + ++A + A F++VV S + KY Sbjct: 30 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKY 236
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.997e-33 Identity = 73/186 (39.25%), Postives = 113/186 (60.75%), Query Frame = 2 Query: 131 IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 +E + +E LR + + + + L+ +G + +D IV +S GP Y VG S VDK++L G +++ L+++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PEL+ +GI+PPKGV+LYG PGTGKTL + ++A++ A FL+VV S +I KY Sbjct: 82 MEEEFVAAQERLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKY 267
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33 Identity = 79/202 (39.11%), Postives = 116/202 (57.43%), Query Frame = 2 Query: 107 KKLLQHKEIESRVRSVKE----NLRAAKKEFNKT----EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 K LQH + R++ K L A + E N ++L+ LQ G +GEV++ + +++VK +YVV +D KLT TRV L + + LP +VDP+V M E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTL + ++A + D F++V S ++ KY Sbjct: 34 KYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY 235 The following BLAST results are available for this feature:
BLAST of FC923324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 181
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923324 ID=FC923324; Name=FC923324; organism=Citrus clementina; type=EST; length=688bpback to top |