FC923324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.208e-32 Identity = 72/164 (43.90%), Postives = 105/164 (64.02%), Query Frame = 2 Query: 197 EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 E ++ L+ +G + +D+ IV ++ GP + V S VDK KL G V+L+ TL+++ + EVDP+V M E SYS +GGL Q++E++E+IELPL +PEL+ +GIKPPKGV+LYG PGTGKTL + ++A+ A FL+VV S +I KY Sbjct: 95 EKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKY 258
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.884e-32 Identity = 77/218 (35.32%), Postives = 128/218 (58.72%), Query Frame = 2 Query: 38 SPTATMSEGEDAVRRRNAMTEYRKKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 S T S+GED + R K L + E IE + VK+ L+ ++E + ++++K +QSV +IG+ + +D IV +++G Y V S +++E L V LD + ++ LP E D + + + +V+Y+ +GG Q +E+RE++ELPL + EL+ ++GI PP+GVLLYGPPGTGKT+ + ++A + A F++VV S + KY Sbjct: 23 SITDVPSDGEDDLYAR------LKSLQRQLEFIEIQEEYVKDELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNNAIVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKY 234
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32 Identity = 70/195 (35.90%), Postives = 119/195 (61.03%), Query Frame = 2 Query: 125 KEIESRVRSVKENLRAAKKEFNKT-------EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 +E E ++RS EN+R + + N +D+L+ LQ G +GEV++ + +++++VK +Y+V ++ + L + RV L + + + L + DP+V M+ E + +Y VGGL+ QI+E++E IELP+ +PELF +GI PKGV+LYGPPGTGKTL + ++A + D F++V + ++ KY Sbjct: 28 QETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIKIVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKY 222
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32 Identity = 71/195 (36.41%), Postives = 117/195 (60.00%), Query Frame = 2 Query: 125 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 ++++ V +NLR + + N+ ++L+ LQ G +GEV+R +D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PE F +GI PKGVLLYGPPGTGKTL + ++A + D F++V S ++ K+ Sbjct: 24 EDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKF 218
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32 Identity = 70/195 (35.90%), Postives = 117/195 (60.00%), Query Frame = 2 Query: 107 KKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 KKL Q E +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+ + ++A + A F++VV S + KY Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKY 239
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32 Identity = 70/195 (35.90%), Postives = 117/195 (60.00%), Query Frame = 2 Query: 107 KKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 KKL Q E +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+ + ++A + A F++VV S + KY Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKY 239
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32 Identity = 70/195 (35.90%), Postives = 117/195 (60.00%), Query Frame = 2 Query: 107 KKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 KKL Q E +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+ + ++A + A F++VV S + KY Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKY 239
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32 Identity = 70/195 (35.90%), Postives = 117/195 (60.00%), Query Frame = 2 Query: 107 KKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 KKL Q E +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+ + ++A + A F++VV S + KY Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKY 239
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.096e-31 Identity = 70/199 (35.18%), Postives = 120/199 (60.30%), Query Frame = 2 Query: 92 MTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 +T ++L + +E ++ NL +KE ++++K +QSV +IG+ L +D IV +++G Y V S +D+E L G V L + ++ LP E D + + ++ ++SY +GGL Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+ + ++A+N A+F++VV S + KY Sbjct: 40 LTTLERQLAHLQVMEDYIKLETRNL---EKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKY 235
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.431e-31 Identity = 81/229 (35.37%), Postives = 127/229 (55.46%), Query Frame = 2 Query: 29 TSISPTATMSEGEDAVRRRNAMTEY---RKKLLQHKEIESRVRSVKENLR---AAKKEFNKTEDD---LKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 T + ++G DA + +T + R KLL+ + I+ + E +R K + K E++ + L+ +G + +D+ IV S G + V S VDK++L G V+L+ ++ L + DP+V M E +Y+ +GGL QI+E++ES+ELPL +PE + +GIKPPKGV+LYGPPGTGKTL + ++A+ A FL+VV S +I KY Sbjct: 30 TRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKY 258 The following BLAST results are available for this feature:
BLAST of FC923324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 181
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923324 ID=FC923324; Name=FC923324; organism=Citrus clementina; type=EST; length=688bpback to top |