FC923324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.869e-31 Identity = 68/179 (37.99%), Postives = 112/179 (62.57%), Query Frame = 2 Query: 152 VKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 +K+ R K+E + ++++K +QSV +IG+ L P+D IV +++G YVV S +D+E L V L + ++ LP + D + M + +V+Y+ VGGL Q +E+RE++ELPL+ +L+ ++GI PP+GVLLYGPPGTGKT+ ++A++ A F++V S + KY Sbjct: 68 IKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTGIVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKY 246
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.441e-31 Identity = 72/208 (34.62%), Postives = 121/208 (58.17%), Query Frame = 2 Query: 86 NAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 N + Y +K+ ++ E + +NLR + + N ++++ LQ G +GEV++ + +++VK +YVV +D +++ RV L + +++ LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +GI PKG+LLYGPPGTGKTL + ++A + D F++V S ++ KY Sbjct: 15 NIVQYYTQKI---QDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKY 219
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.164e-31 Identity = 69/195 (35.38%), Postives = 116/195 (59.49%), Query Frame = 2 Query: 107 KKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 KKL Q E +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+ + ++A + A F++VV S + KY Sbjct: 45 KKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVASTTGSNYYVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKY 239
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.103e-31 Identity = 80/229 (34.93%), Postives = 129/229 (56.33%), Query Frame = 2 Query: 29 TSISPTATMSEGEDAVRRRNAMTEY---RKKLLQHKEIESRVRSVKENLRAAK--KEFNKTEDDLKS----LQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 T + ++G DA + +T + R KLL+ + I+ + +E +R + K + +++ +S L+ +G + +D+ IV S G + V S VDK+ L G V+L+ ++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKPPKGV+LYGPPGTGKTL + ++A+ A FL+VV S +I KY Sbjct: 31 TRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKY 259
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.103e-31 Identity = 80/229 (34.93%), Postives = 129/229 (56.33%), Query Frame = 2 Query: 29 TSISPTATMSEGEDAVRRRNAMTEY---RKKLLQHKEIESRVRSVKENLRAAK--KEFNKTEDDLKS----LQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 T + ++G DA + +T + R KLL+ + I+ + +E +R + K + +++ +S L+ +G + +D+ IV S G + V S VDK+ L G V+L+ ++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKPPKGV+LYGPPGTGKTL + ++A+ A FL+VV S +I KY Sbjct: 31 TRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKY 259
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.103e-31 Identity = 80/229 (34.93%), Postives = 129/229 (56.33%), Query Frame = 2 Query: 29 TSISPTATMSEGEDAVRRRNAMTEY---RKKLLQHKEIESRVRSVKENLRAAK--KEFNKTEDDLKS----LQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 T + ++G DA + +T + R KLL+ + I+ + +E +R + K + +++ +S L+ +G + +D+ IV S G + V S VDK+ L G V+L+ ++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKPPKGV+LYGPPGTGKTL + ++A+ A FL+VV S +I KY Sbjct: 31 TRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKY 259
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.103e-31 Identity = 80/229 (34.93%), Postives = 129/229 (56.33%), Query Frame = 2 Query: 29 TSISPTATMSEGEDAVRRRNAMTEY---RKKLLQHKEIESRVRSVKENLRAAK--KEFNKTEDDLKS----LQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 T + ++G DA + +T + R KLL+ + I+ + +E +R + K + +++ +S L+ +G + +D+ IV S G + V S VDK+ L G V+L+ ++ L + DP+V M E +Y+ +GGL +QI+E++ES+ELPL +PE + +GIKPPKGV+LYGPPGTGKTL + ++A+ A FL+VV S +I KY Sbjct: 31 TRVGKKKKKTKGPDAASKPPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKY 259
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.103e-31 Identity = 78/220 (35.45%), Postives = 126/220 (57.27%), Query Frame = 2 Query: 56 SEGEDAVRRRNAMTEY---RKKLLQHKEIESRVRSVKE---NLRAAKKEFNKTEDD---LKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 S+G DA + A+T + R KLL+ + I+ + +E N K + + E++ + L+ +G + +D++ IV + G + V S VDKE+L G V+L+ ++ L + DP+V M E +Y+ VGGL QI+E++E++ELPL +PE + +GI+PPKGV+LYG PGTGKTL + ++A+ A FL++V S +I KY Sbjct: 43 SKGPDAASKLPAVTPHARCRLKLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKY 262
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.582e-30 Identity = 65/179 (36.31%), Postives = 111/179 (62.01%), Query Frame = 2 Query: 152 VKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 VK+ + K+E + ++++K +QSV +IG+ + +D IV +++G Y V S +++E L V L + ++ LP E D + + + +VSY+ +GG Q +E+RE++ELPL + EL+ ++GI PP+GVLLYGPPGTGKT+ + ++A++ A F++VV S + KY Sbjct: 51 VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKY 229
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.067e-30 Identity = 74/204 (36.27%), Postives = 121/204 (59.31%), Query Frame = 2 Query: 95 TEYRKKLLQHKEIESRVRSVKE---NLRAAKKEFNKTEDD---LKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 T R +LL+ + I + +E N K + +T+++ + ++ +G + +D++ IV +++GP Y V S VDK+ L G V+L ++I+ L + DP++ M + SY+ +GGL QI+E++E++ELPL +PEL+ +GIKPPKGV+LYG PGTGKTL + ++A+ A FL+VV S +I KY Sbjct: 63 TRCRLRLLKMQRIHDHLLMEEEYVQNQERLKPQDERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAIV-STAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKY 265 The following BLAST results are available for this feature:
BLAST of FC923324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 181
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923324 ID=FC923324; Name=FC923324; organism=Citrus clementina; type=EST; length=688bpback to top |