FC923324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30 Identity = 70/196 (35.71%), Postives = 115/196 (58.67%), Query Frame = 2 Query: 116 LQHKEIE----SRVRSVKENLRAA-KKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 L H E++ +++ V E RA + +++ +Q +G V+ + +++VK + +Y+V V+ ++L +G RV L + + R LP +VDP+V M+ E + +Y +GGL +QI+E+RE IELP+ +PELF +GI PKGVLLYGPPGTGKTL + ++A + F++V S ++ KY Sbjct: 75 LDHLEVQIAKKTKILRVLEQKRAELNRRVRFLREEISIVQEPSSNVGVVVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVAHHTQCKFIRVSGSELVQKY 270
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.750e-29 Identity = 72/194 (37.11%), Postives = 116/194 (59.79%), Query Frame = 2 Query: 107 KKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 KKL +E + S+ E ++++ N + ++ L+ +G + +D+ I+ G Y V S VDK+ L G V+L+ +++ L E+DP+V M E + +Y+ +GGL +QI+E++ES+ELPL NPEL+ +GIKPPKGV+LYG PGTGKTL + ++A+ A FL+VV + +I +Y Sbjct: 51 KKLAHLLSLEDNILSLCEPDKSSEGS-NSQKHVVEQLRGSPLSVGTLEEFVDDHHGIITTGVGLEYYVNIMSFVDKDLLEPGCTVLLNYKDNSVVGVLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPKGVILYGLPGTGKTLLAKAVANQTSATFLRVVGTELIQEY 243
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29 Identity = 72/217 (33.18%), Postives = 126/217 (58.06%), Query Frame = 2 Query: 44 TATMSEGEDAVRRRNAMTEYRKKLLQHKEIESRVRS--VKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 TA ++ ++A R A + K L+ K ++ +K + K+E ++++K ++SV +IG++L +D+ IV+++SG V S +D+E L V L + ++ LP E D ++ + ++ + SYS +GG Q +E+RE++ELPL + L+ ++GI PP+GVLLYGPPGTGKT+ + ++A + A F++VV S + KY Sbjct: 8 TAKVTVTKEASHHREADLYQKMKSLESKLDFFNIQEEYIKYEYKNLKRELLHAQEEVKRIRSVPLLIGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKY 224
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.984e-29 Identity = 61/143 (42.66%), Postives = 91/143 (63.64%), Query Frame = 2 Query: 260 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 ++ + ++ ++VVG +V + G RV +D + I LP +DP V M E+ +V+YS VGG DQI +LRE +ELPL++PE F +GI PPKG+LLYGPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 141 EDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKY 283
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.134e-28 Identity = 59/143 (41.26%), Postives = 92/143 (64.34%), Query Frame = 2 Query: 260 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 D+ + ++ ++VVG KV + G RV +D I LP ++DP V M E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 100 DDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKY 242
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28 Identity = 58/143 (40.56%), Postives = 92/143 (64.34%), Query Frame = 2 Query: 260 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 ++ + ++ ++VVG KV + G RV +D I LP ++DP V M E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 100 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKY 242
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28 Identity = 58/143 (40.56%), Postives = 92/143 (64.34%), Query Frame = 2 Query: 260 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 ++ + ++ ++VVG KV + G RV +D I LP ++DP V M E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 99 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKY 241
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28 Identity = 78/229 (34.06%), Postives = 120/229 (52.40%), Query Frame = 2 Query: 53 MSEGEDAVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLR----------------AAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 + EG+ AV +R Y ++L +IE+ ++ V E AA K+ + E L+ + I + P R ++ ++VV V + G RV +D I LP ++DP V M E+ +V+YS VGG DQI +LRE +E PL++PE ++ +GI+PPKGVLLYGPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 27 LDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDP----RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKY 251
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28 Identity = 58/143 (40.56%), Postives = 92/143 (64.34%), Query Frame = 2 Query: 260 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 ++ + ++ ++VVG KV + G RV +D I LP ++DP V M E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 100 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKY 242
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 4.309e-28 Identity = 72/229 (31.44%), Postives = 123/229 (53.71%), Query Frame = 2 Query: 41 PTATMSEGEDAVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTED-------DLKSLQS-----VGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 P + EG+ A+ + + Y +++ Q +I+ ++ + E + + D ++LQS V + + ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 21 PIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIITADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKY 249 The following BLAST results are available for this feature:
BLAST of FC923324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 181
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923324 ID=FC923324; Name=FC923324; organism=Citrus clementina; type=EST; length=688bpback to top |