FC923324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.628e-28 Identity = 72/229 (31.44%), Postives = 124/229 (54.15%), Query Frame = 2 Query: 41 PTATMSEGEDAVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTED-------DLKSLQS-----VGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 P ++ EG+ A+ + + Y +++ Q +I+ ++ + E + + D ++LQS V + + ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 21 PIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKY 249
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 124.02 bits (310), Expect = 7.351e-28 Identity = 72/229 (31.44%), Postives = 123/229 (53.71%), Query Frame = 2 Query: 41 PTATMSEGEDAVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTED-------DLKSLQS-----VGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 P + EG+ A+ + + Y +++ Q +I+ ++ + E + + D ++LQS V + + ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 21 PIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKY 249
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 7.351e-28 Identity = 72/229 (31.44%), Postives = 123/229 (53.71%), Query Frame = 2 Query: 41 PTATMSEGEDAVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTED-------DLKSLQS-----VGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 P + EG+ A+ + + Y +++ Q +I+ ++ + E + + D ++LQS V + + ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 21 PIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKY 249
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 7.351e-28 Identity = 72/229 (31.44%), Postives = 123/229 (53.71%), Query Frame = 2 Query: 41 PTATMSEGEDAVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTED-------DLKSLQS-----VGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 P + EG+ A+ + + Y +++ Q +I+ ++ + E + + D ++LQS V + + ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 21 PIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKY 249
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 7.351e-28 Identity = 72/229 (31.44%), Postives = 123/229 (53.71%), Query Frame = 2 Query: 41 PTATMSEGEDAVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTED-------DLKSLQS-----VGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 P + EG+ A+ + + Y +++ Q +I+ ++ + E + + D ++LQS V + + ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 21 PIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKY 249
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.638e-27 Identity = 72/229 (31.44%), Postives = 122/229 (53.28%), Query Frame = 2 Query: 41 PTATMSEGEDAVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTED-------DLKSLQS-----VGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 P + EG+ A+ + + Y +++ Q +I+ ++ + E + + D ++LQS V + + ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL + ++A+ DA F+ V+ S ++ KY Sbjct: 21 PIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKY 249
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.139e-27 Identity = 57/130 (43.85%), Postives = 84/130 (64.62%), Query Frame = 2 Query: 299 RYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 ++VV +V + G RV D I LP ++DP V M E+ +V+Y VGG +QI LRE +ELPL++PE F+++GI PPKG++LYGPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 124 KFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKY 253
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 4.765e-27 Identity = 58/143 (40.56%), Postives = 90/143 (62.94%), Query Frame = 2 Query: 260 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 ++ + +V +YVVG K + +G RV +D I LP ++DP V M E+ + +YS +GG +QI ++RE +ELP+++PE F+R+GI PPKGVL YGPPG+GKTL + ++A+ A F++VV S ++ KY Sbjct: 137 EDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKY 279
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.811e-26 Identity = 57/142 (40.14%), Postives = 88/142 (61.97%), Query Frame = 2 Query: 263 NERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 N + I+ ++VV K+ + G RV +D I LP ++D V M E+ +++Y VGG +QI +LRE +E+PL++PE F+ +GI PPKGVL+YGPPGTGKTL + ++A+ DA F++V+ S ++ KY Sbjct: 103 NAKYIITVKQIAKFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKY 244
BLAST of FC923324 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25 Identity = 64/217 (29.49%), Postives = 124/217 (57.14%), Query Frame = 2 Query: 41 PTATMSEGEDAVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLXSTSIASNIDANFLKVVSSAIIDKY 688 PT + R NA+ ++ ++ + E+++++ V+ ++E N+ + + ++L++ + V ++ ++K + V+ S + L G RV ++ + ++ R L E D M ++ +V+Y+ +GGL DQ+RE+RE++E PL+NPE F VG++PP GVLL+GPPGTGKT+ + ++A+ DA+F+K+ S ++ K+ Sbjct: 11 PTLDVDPESTPAERLNALQDHYVDIVAVNGELQAQLDDVEARREELREEVNRLQRENETLKTASLYLATVEDLPEDGSAVIKQHGNNQEVLTELSPRLADTLEVGDRVAIN-DSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELVRKF 226 The following BLAST results are available for this feature:
BLAST of FC923324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 181
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923324 ID=FC923324; Name=FC923324; organism=Citrus clementina; type=EST; length=688bpback to top |