FC923335

Overview
NameFC923335
Unique NameFC923335
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.054e-33
Identity = 85/233 (36.48%), Postives = 130/233 (55.79%), Query Frame = 2
Query:    2 TTGTVEITKCADEIAIWNYDGRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNR--TLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVL 694
            TTGTV+    +   +I   + + T+ ++++ T++F+    +G GG+ +VY   L   +V A+K L     +    + F+ E  LL ++ HR++V L G+C     + LIYEYME G L   +        L W  R+ I    A  L YLH+ C PP++HRD+   NILLN   +A +ADFG++R    D  +   T++AGT G + PE   T  ++EK DVYSFGVV LE++
Sbjct:  538 TTGTVKSDARSSSSSIITKERKFTYSEVLKMTKNFE--RVLGKGGFGTVYHGNLDDTQV-AVKMLSHSSAQ--GYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIV 765          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.054e-33
Identity = 78/205 (38.05%), Postives = 120/205 (58.54%), Query Frame = 2
Query:   92 ATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            AT  F     +G GG+  V++  L  G  +A+K+L +   +   ++ FQNE  L+++++HRN+V + GFC+  +   L+YE++   SL   L    +   LDW KR  I+ G A  + YLHH     I+HRD+ ++NILL++E E  VADFG+AR+   D S  +   + GT+G I+PE       + K DVYSFGV+ LE++ G
Sbjct:  317 ATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQ--GVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISG 519          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33
Identity = 87/216 (40.28%), Postives = 118/216 (54.63%), Query Frame = 2
Query:   53 NYDGRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARL-LNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVL 694
            N   RI    + EAT  FD    IG GG+  VY+  L  G  VA+K+ +    +   L  F+ E  +LSQ RHR++V L G+C     M L+YEYME G+L   L      + L W +R+ I  G A  L YLH     P++HRD+ S NILL+    A VADFG+++     D ++  T + G++G + PE      +TEK DVYSFGVV  EVL
Sbjct:  465 NSSYRIPLVAVKEATNSFDENRAIGVGGFGKVYKGELHDGTKVAVKRANPKSQQ--GLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLY-GSGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVL 677          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33
Identity = 88/237 (37.13%), Postives = 132/237 (55.70%), Query Frame = 2
Query:   20 ITKCADEIAIWNYDGR----ITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILR--TDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL------NYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVL 694
            I K  +E+   N  G+     T +++ +AT +F     IGTGG+  V++A L  G + A+K+     T+    +   NE R+L Q+ HR++V+L G C+  +   LIYE++  G+LF  L   +D     L W +R+ I    A  L+YLH    PPI HRD+ S+NILL+ +  A V+DFG++RL+      N +S   T   GT G + PE      +T+K DVYSFGVV LE++
Sbjct:  331 IVKEREEMLSANSTGKSSRIFTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTK--GTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMV 565          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33
Identity = 79/216 (36.57%), Postives = 126/216 (58.33%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRT----LLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            ++ F  +  AT DF     +G GG+ +VY+  L  G+ +A+K+L     +      F NE  L+++++HRN+V+L GFCL  +   LIYE+ +  SL   +      + LDW  R  I+ G+A  L YLH      I+HRD+ ++N+LL+      +ADFG+A+L + D +++T     +AGTYG +APE A +   + K DV+SFGV+ LE++ G
Sbjct:  331 QLDFDTIRLATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQ--GDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKG 544          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.349e-33
Identity = 80/223 (35.87%), Postives = 124/223 (55.61%), Query Frame = 2
Query:   74 FQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTL--LAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRALSSSSRH 736
            F+ +  AT +F     +G GG+  V++   P+G  VA+K+L ++  +    E F+NE  L+++++HRN+V+L GF +  +   L+YEYM   SL   L        LDW  R NI++G+   + YLH      I+HRD+ + NILL+ +    +ADFG+AR    D +  T   + GT+G + PE       + K DVYSFGV+ LE+++G       SSS H
Sbjct:  325 FKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKRLSKISGQ--GEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGK-----KSSSFH 540          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.349e-33
Identity = 85/219 (38.81%), Postives = 126/219 (57.53%), Query Frame = 2
Query:   74 FQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTL--LAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRALSS 724
            F+ +  AT +F  +  +G GG   V++ RLP GK +A+K+L   +TE +  E F+NE  L+++++HRN+V+L GF +  +   ++YEY+   SL  IL    +   LDW KR  I+ G A  + YLH    P I+HRD+ + NILL++     VADFG AR+   D S       AGT G +APE       + K DVYS+GV+ LE++ G    + SS
Sbjct:  350 FKTIETATNNFSER--LGHGGSGHVFKGRLPDGKEIAVKRLSE-KTEQSKKE-FKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNTSFSS 564          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.068e-33
Identity = 87/216 (40.28%), Postives = 122/216 (56.48%), Query Frame = 2
Query:   53 NYDGRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARL-LNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVL 694
            N + RI F  + +AT +FD    IG GG+  VY+  L  G  VA+K+ +    +   L  F+ E  +LSQ RHR++V L G+C     M LIYEYME G++   L        L W +R+ I  G A  L YLH   + P++HRD+ S NILL+  F A VADFG+++     D ++  T + G++G + PE      +T+K DVYSFGVV  EVL
Sbjct:  468 NANYRIPFAAVKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQ--GLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLY-GSGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVL 680          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.068e-33
Identity = 77/215 (35.81%), Postives = 130/215 (60.47%), Query Frame = 2
Query:   68 ITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN----RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            + F+ +  AT++F  +  +G GG+ SVY+     G+ +A+K+L     +  S   F+NE  LL++++HRN+V+L GFC+  +   L+YE+++  SL   +   ++   LDW  R  ++ G+A  L YLH      I+HRD+ ++NILL+ E    +ADFG+A+L + D ++     + +AGTYG +APE A     + K DV+SFGV+ +E++ G
Sbjct:  349 VDFETLKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLSCTSGQGDS--EFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQLLDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITG 561          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.068e-33
Identity = 75/195 (38.46%), Postives = 116/195 (59.49%), Query Frame = 2
Query:  122 IGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTL--LAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            +G GG+  VY+  L SG  VA+K+L +  T     + F+NE  ++++++HRN+VKL G+CL  +   L+YE++   SL   L      + LDWT+R  I+ G+A  + YLH      I+HRD+ + NILL+ +    +ADFG+AR+   D +      + GTYG ++PE A     + K DVYSFGV+ LE++ G
Sbjct:  332 LGQGGFGEVYKGTLSSGLQVAVKRLSK--TSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISG 524          
The following BLAST results are available for this feature:
BLAST of FC923335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5189_ARATH1.054e-3336.48Probable LRR receptor-like protein kinase At1g5189... [more]
CRK33_ARATH1.054e-3338.05Putative cysteine-rich receptor-like protein kinas... [more]
Y5597_ARATH1.798e-3340.28Probable receptor-like protein kinase At5g59700 OS... [more]
WAKLQ_ARATH1.798e-3337.13Wall-associated receptor kinase-like 20 OS=Arabido... [more]
CRK41_ARATH1.798e-3336.57Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK16_ARATH2.349e-3335.87Putative cysteine-rich receptor-like protein kinas... [more]
CRK13_ARATH2.349e-3338.81Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
HERK_ARATH3.068e-3340.28Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
CRK28_ARATH3.068e-3335.81Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK19_ARATH3.068e-3338.46Cysteine-rich receptor-like protein kinase 19 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC31703H11EF StrClemenN Citrus clementina cDNA clone C31703H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923335 ID=FC923335; Name=FC923335; organism=Citrus clementina; type=EST; length=756bp
AACAACTGGGACAGTAGAAATTACCAAGTGCGCTGATGAGATTGCAATTT
GGAATTACGATGGTAGAATTACATTTCAAGACATGATTGAAGCCACTGAG
GATTTCGATATCAAATACTGCATTGGAACCGGAGGCTACGACAGCGTTTA
CAGAGCACGACTACCCAGTGGAAAAGTGGTTGCTTTGAAGAAGCTTCACC
GTTTAGAAACTGAGTTAGCTTCCCTCGAGAGTTTCCAGAATGAGGCTCGT
CTACTGTCCCAAATACGGCATCGAAATATCGTAAAGCTTTACGGCTTTTG
TTTGCACGAGAAATGCATGTTCTTGATCTATGAGTACATGGAAATGGGAA
GCTTGTTCTGTATTCTACGCACAGATGAGGAAGCTGTTGGGTTGGATTGG
ACTAAAAGGGTGAACATTGTGAAGGGTATGGCCCATGCTTTGTCATACTT
GCATCATCACTGCACACCACCAATTCTTCACCGCGACATATCAAGCAACA
ACATTCTACTCAACTCAGAATTCGAAGCTTTTGTAGCTGACTTTGGCATT
GCTAGATTGTTAAATTATGACTCATCCAATCGAACTCTGTTAGCTGGCAC
TTATGGATCTATTGCTCCAGAACTTGCCTACACCATGGTTGTGACAGAGA
AATATGATGTTTATAGCTTCGGAGTAGTGGCACTAGAAGTACTAATGGGA
AGCATCCAGAGAGCTCTCTCATCGTCATCTCGTCATGGATAAATATAAGC
TGATGA
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