FC923335

Overview
NameFC923335
Unique NameFC923335
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.068e-33
Identity = 83/216 (38.43%), Postives = 123/216 (56.94%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKC--MFLIYEYMEMGSLFCILRTDEEAVG--LDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            T++++ +A + F  +  +G G +  VY+  L  G  VA+K+      +  +   F+ E  LLS++ H +++ L G+C  E+C    L+YE+M  GSL   L    +A+   LDW KRV I    A  + YLH +  PP++HRDI S+NIL++ E  A VADFG++ L   DS +    L AGT G + PE      +T K DVYSFGV+ LE+L G
Sbjct:  501 TYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYC--EECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSG 714          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.233e-33
Identity = 80/227 (35.24%), Postives = 125/227 (55.07%), Query Frame = 2
Query:   32 ADEIAIWNYDGRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNR--TLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSI 706
            + E AI   + R T+ +++  T +F+    +G GG+  VY   + + + VA+K L    ++    + F+ E  LL ++ H+N+V L G+C   + + LIYEYM  G L   +        L+W  R+ IV   A  L YLH+ C PP++HRD+ + NILLN    A +ADFG++R    +      T++AGT G + PE   T  + EK DVYSFG+V LE++   +
Sbjct:  570 SSESAIMTKNRRFTYSEVVTMTNNFE--RVLGKGGFGMVYHGTVNNTEQVAVKMLSHSSSQ--GYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQL 792          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.233e-33
Identity = 81/223 (36.32%), Postives = 123/223 (55.16%), Query Frame = 2
Query:   50 WNYDG--RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGK-VVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVG--LDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDS-SNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            W  D   R  ++D+ +ATE F     +GTGG+  VYR  + S    +A+KK+      +  +  F  E   L ++RH+N+V L G+C H   + LIY+Y+  GSL  +L +     G  L W  R  I KG+A  L YLH      ++HRD+  +N+L++S+    + DFG+ARL    S S  T++ GT G +APELA     +   DV++FGV+ LE++ G
Sbjct:  343 WEIDHPHRFRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQIAVKKI--TPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSG 563          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.834e-33
Identity = 84/216 (38.89%), Postives = 126/216 (58.33%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPS-GKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSL---FCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARL-LNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            TFQ++ EAT +F     +G GG+  V++  +    +VVA+K+L R    +  +  F  E   LS   H N+VKL GFC       L+YEYM  GSL     +L + ++   LDW  R+ I  G A  L YLH   TPP+++RD+  +NILL  +++  ++DFG+A++  + D ++  T + GTYG  AP+ A T  +T K D+YSFGVV LE++ G
Sbjct:   92 TFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDR--NGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKP--LDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITG 303          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.925e-33
Identity = 82/212 (38.68%), Postives = 121/212 (57.08%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNR--TLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVL 694
            RIT+ ++++ T +F+    +G GG+ +VY   L   +V A+K L     +    + F+ E  LL ++ HRN+V L G+C     + LIYEYM  G L   +        L W  R+ I    A  L YLH+ CTPP++HRD+ + NILLN  + A +ADFG++R    D  +   T++AGT G + PE   T  ++EK DVYSFGVV LE++
Sbjct:  555 RITYPEVLKMTNNFE--RVLGKGGFGTVYHGNLEDTQV-AVKMLSHSSAQ--GYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIV 761          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.166e-32
Identity = 82/223 (36.77%), Postives = 127/223 (56.95%), Query Frame = 2
Query:   32 ADEIAIWNYDGRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR--LLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVL 694
            + E AI   + R ++  ++  T +F  +  +G GG+  VY   +   + VA+K L    ++    + F+ E  LL ++ H+N+V L G+C     + LIYEYM  G L   +        L+W  R+ IV   A  L YLH+ C PP++HRD+ + NILLN  FEA +ADFG++R  L+  ++   T++AGT G + PE   T  +TEK DVYSFG++ LE++
Sbjct:  556 SSEPAIVTKNRRFSYSQVVIMTNNF--QRILGKGGFGMVYHGFVNGTEQVAVKILSHSSSQ--GYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEII 774          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.522e-32
Identity = 85/213 (39.91%), Postives = 113/213 (53.05%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEE-AVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRT--LLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            T   + + T  F  +  IGTG   SVYRA LP GK+ A++KL +          F      + +IRH NIV+L GFC       LI+EY   G+L  +L  D+   + L W  RV I    A AL YLH  C PP +HR+  S NILL+ +    V+D G+A L++  + ++    L   YG  APE  Y  + T K DVYSFGVV LE+L G
Sbjct:  467 TVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGKLFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIELSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQLSGQLLAAYGYGAPEFEYG-IYTMKCDVYSFGVVMLELLTG 678          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.988e-32
Identity = 79/233 (33.91%), Postives = 129/233 (55.36%), Query Frame = 2
Query:    8 GTVEITKCADEIAIWNYDGRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIAR--LLNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            GT       D++   +   R  F+ +  AT +F     +G GG+ +VY+   P+G  VA K+L +   +      F+NE  L+++++H+N+V L GF +  +   L+YE++   SL   L    + V LDW +R NI++G+   + YLH      I+HRD+ ++NILL++E    +ADFG+AR   +N   +N   + GT+G + PE       + K DVYSFGV+ LE++ G
Sbjct:  331 GTASPDDATDDLTASSGSLRFDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTEVAAKRLSKPSDQ--GEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQLDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGG 561          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.988e-32
Identity = 76/205 (37.07%), Postives = 120/205 (58.54%), Query Frame = 2
Query:   92 ATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            AT  F     IG GG+  VY+    +G  VA+K+L +   +  +   F+NE  ++++++HRN+V+L GF +      L+YEYM   SL   L    +   LDWT+R  ++ G+A  + YLH      I+HRD+ ++NILL+++    +ADFG+AR+   D +  N + + GT+G +APE A     + K DVYSFGV+ LE++ G
Sbjct:  333 ATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSSGQGDT--EFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKSDVYSFGVLVLEIISG 535          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.988e-32
Identity = 80/214 (37.38%), Postives = 120/214 (56.07%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVG--LDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN--RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            +++++ +AT  F     +G G +  V++  L  G VVA+K+  +      S + F NE  LLS++ H +++ L G+C       L+YE+M  GSL+  L   +  +   L+W +RV I    A  + YLH +  PP++HRDI S+NIL++ +  A VADFG++ L   DS      L AGT G + PE      +T K DVYSFGVV LE+L G
Sbjct:  494 SYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSG 707          
The following BLAST results are available for this feature:
BLAST of FC923335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ACR4_ARATH3.068e-3338.43Serine/threonine-protein kinase-like protein ACR4 ... [more]
RLK6_ARATH5.233e-3335.24Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
LRKA3_ARATH5.233e-3336.32Lectin-domain containing receptor kinase A4.3 OS=A... [more]
RLCK7_ARATH6.834e-3338.89Probable serine/threonine-protein kinase RLCKVII O... [more]
Y5188_ARATH8.925e-3338.68Probable LRR receptor-like serine/threonine-protei... [more]
Y5182_ARATH1.166e-3236.77Probable LRR receptor-like serine/threonine-protei... [more]
SRF1_ARATH1.522e-3239.91Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
CRK21_ARATH1.988e-3233.91Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
CRK15_ARATH1.988e-3237.07Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRI4_MAIZE1.988e-3237.38Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]

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Properties
Property NameValue
Genbank descriptionC31703H11EF StrClemenN Citrus clementina cDNA clone C31703H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923335 ID=FC923335; Name=FC923335; organism=Citrus clementina; type=EST; length=756bp
AACAACTGGGACAGTAGAAATTACCAAGTGCGCTGATGAGATTGCAATTT
GGAATTACGATGGTAGAATTACATTTCAAGACATGATTGAAGCCACTGAG
GATTTCGATATCAAATACTGCATTGGAACCGGAGGCTACGACAGCGTTTA
CAGAGCACGACTACCCAGTGGAAAAGTGGTTGCTTTGAAGAAGCTTCACC
GTTTAGAAACTGAGTTAGCTTCCCTCGAGAGTTTCCAGAATGAGGCTCGT
CTACTGTCCCAAATACGGCATCGAAATATCGTAAAGCTTTACGGCTTTTG
TTTGCACGAGAAATGCATGTTCTTGATCTATGAGTACATGGAAATGGGAA
GCTTGTTCTGTATTCTACGCACAGATGAGGAAGCTGTTGGGTTGGATTGG
ACTAAAAGGGTGAACATTGTGAAGGGTATGGCCCATGCTTTGTCATACTT
GCATCATCACTGCACACCACCAATTCTTCACCGCGACATATCAAGCAACA
ACATTCTACTCAACTCAGAATTCGAAGCTTTTGTAGCTGACTTTGGCATT
GCTAGATTGTTAAATTATGACTCATCCAATCGAACTCTGTTAGCTGGCAC
TTATGGATCTATTGCTCCAGAACTTGCCTACACCATGGTTGTGACAGAGA
AATATGATGTTTATAGCTTCGGAGTAGTGGCACTAGAAGTACTAATGGGA
AGCATCCAGAGAGCTCTCTCATCGTCATCTCGTCATGGATAAATATAAGC
TGATGA
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