FC923335

Overview
NameFC923335
Unique NameFC923335
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.419e-40
Identity = 86/209 (41.15%), Postives = 133/209 (63.64%), Query Frame = 2
Query:   77 QDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            +++ +AT++F++   +G GG  +VY+  L  G++VA+K+   L+ +   +E F NE  +LSQI HRNIVKL G CL  +   L+YE++  G LF  L  D +   + W  R+ I   +A AL+YLH   + P+ HRD+ + NILL+ ++ A V+DFG +R +N D ++  TL+AGT+G + PE   T   T+K DVYSFGVV +E++ G
Sbjct:  412 KELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDED--KVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITG 618          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.772e-40
Identity = 89/214 (41.59%), Postives = 129/214 (60.28%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEA-VGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY-DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            R + ++++ ATE F  +  +G G +  +Y+ RL    +VA+K+L+   T+   L+ FQ E  ++S   HRN+++L GFC+      L+Y YM  GS+   LR   E    LDW KR +I  G A  L+YLH HC   I+H D+ + NILL+ EFEA V DFG+A+L+NY DS   T + GT G IAPE   T   +EK DV+ +GV+ LE++ G
Sbjct:  262 RFSLRELLVATEKFSKRNVLGKGRFGILYKGRLADDTLVAVKRLNEERTKGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 474          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.538e-40
Identity = 89/202 (44.06%), Postives = 122/202 (60.40%), Query Frame = 2
Query:  122 IGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN---------YDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            IGTG    VYR  +PSG+ +A+KK+   E   A    F +E + L  IRHRNIV+L G+C +     L Y+Y+  GSL   L    +   +DW  R ++V G+AHAL+YLHH C P I+H D+ + N+LL   FE ++ADFG+AR ++            +NR  +AG+YG +APE A    +TEK DVYS+GVV LEVL G
Sbjct:  766 IGTGSSGVVYRITIPSGESLAVKKMWSKEESGA----FNSEIKTLGSIRHRNIVRLLGWCSNRNLKLLFYDYLPNGSLSSRLHGAGKGGCVDWEARYDVVLGVAHALAYLHHDCLPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTG 963          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.538e-40
Identity = 93/216 (43.06%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLS-----QIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNY-DSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            T+ D+++AT +F  +  +G GGY +VYR  LP G+ VA+KKL R  TE    + F+ E  +LS        H N+V+LYG+CL      L++EYM  GSL  ++ TD+    L W KR++I   +A  L +LHH C P I+HRD+ ++N+LL+    A V DFG+ARLLN  DS   T++AGT G +APE   T   T + DVYS+GV+ +E+  G
Sbjct:  803 TYADILKATSNFSEERVVGRGGYGTVYRGVLPDGREVAVKKLQREGTEAE--KEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELI-TDKTK--LQWKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATG 1013          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.845e-40
Identity = 93/217 (42.86%), Postives = 131/217 (60.37%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCIL---RTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTL--LAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            ++ F  +IEAT  F     IG GG+  V++A L  G  VA+KKL RL  +      F  E   L +I+HRN+V L G+C   +   L+YE+M+ GSL  +L   RT E+   L W +R  I KG A  L +LHH+C P I+HRD+ S+N+LL+ + EA V+DFG+ARL++   ++ ++  LAGT G + PE   +   T K DVYS GVV LE+L G
Sbjct:  825 KLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQ--GDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSG 1039          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.286e-39
Identity = 89/214 (41.59%), Postives = 131/214 (61.21%), Query Frame = 2
Query:   68 ITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLE-SFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSL-FCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN-YDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            ++ ++++++T +F     IG GG+  VY+A  P G   A+K   RL  +   +E  FQ E   LS+  H+N+V L G+C H     LIY +ME GSL + +    +  + L W  R+ I +G A  L+YLH  C P ++HRD+ S+NILL+ +FEA +ADFG+ARLL  YD+   T L GT G I PE + +++ T + DVYSFGVV LE++ G
Sbjct:  742 LSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVK---RLSGDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTG 952          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.286e-39
Identity = 90/216 (41.67%), Postives = 135/216 (62.50%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVG--LDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTL--LAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            ++TF D++EAT  F     +G+GG+  VY+A+L  G VVA+KKL  +  +      F  E   + +I+HRN+V L G+C   +   L+YEYM+ GSL  +L  D + +G  L+W  R  I  G A  L++LHH+C P I+HRD+ S+N+LL+   EA V+DFG+ARL++   ++ ++  LAGT G + PE   +   + K DVYS+GVV LE+L G
Sbjct:  875 KLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQ--GDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLH-DRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTG 1087          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.679e-39
Identity = 92/232 (39.66%), Postives = 141/232 (60.78%), Query Frame = 2
Query:   11 TVEITKCADEIAIWNYDGRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            T E+ +  DEI    +  + +F+ +  AT+ F     IG GG+  VYR +L SG  VA+K+L +   + A  E F+NEA L+S+++H+N+V+L GFCL  +   L+YE++   SL   L    +   LDWT+R NI+ G+A  + YLH      I+HRD+ ++NILL+++    +ADFG+AR+   D S  N   +AGT+G ++PE A     + K DVYSFGV+ LE++ G
Sbjct:  316 TTEV-QATDEITT-THSLQFSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGA--EEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISG 543          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.193e-39
Identity = 88/215 (40.93%), Postives = 134/215 (62.33%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEA-VGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTL--LAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            ++TF D++EAT  F     +G+GG+  VY+A+L  G VVA+KKL  +  +      F  E   + +I+HRN+V L G+C   +   L+YEYM+ GSL  +L   ++  + L+W  R  I  G A  L++LHH+C P I+HRD+ S+N+LL+   EA V+DFG+ARL++   ++ ++  LAGT G + PE   +   + K DVYS+GVV LE+L G
Sbjct:  875 KLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQ--GDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTG 1087          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39
Identity = 93/217 (42.86%), Postives = 127/217 (58.53%), Query Frame = 2
Query:   89 EATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHR--------LETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEA-VGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN----RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            E  +  D K  IG G    VY+  L  G+VVA+KKL++          ++  + + F  E   L  IRH++IV+L+  C    C  L+YEYM  GSL  +L  D +  V L W +R+ I    A  LSYLHH C PPI+HRD+ S+NILL+S++ A VADFGIA++     S      + +AG+ G IAPE  YT+ V EK D+YSFGVV LE++ G
Sbjct:  678 EIADCLDEKNVIGFGSSGKVYKVELRGGEVVAVKKLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTG 894          
The following BLAST results are available for this feature:
BLAST of FC923335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLI_ARATH4.419e-4041.15Wall-associated receptor kinase-like 22 OS=Arabido... [more]
SERK5_ARATH5.772e-4041.59Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
Y4265_ARATH7.538e-4044.06Probable LRR receptor-like serine/threonine-protei... [more]
Y1743_ARATH7.538e-4043.06Probable LRR receptor-like serine/threonine-protei... [more]
BRL2_ARATH9.845e-4042.86Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
PSKR2_ARATH1.286e-3941.59Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
BRI1_SOLLC1.286e-3941.67Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
CRK35_ARATH1.679e-3939.66Putative cysteine-rich receptor-like protein kinas... [more]
BRI1_SOLPE2.193e-3940.93Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
RLK5_ARATH2.865e-3942.86Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31703H11EF StrClemenN Citrus clementina cDNA clone C31703H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923335 ID=FC923335; Name=FC923335; organism=Citrus clementina; type=EST; length=756bp
AACAACTGGGACAGTAGAAATTACCAAGTGCGCTGATGAGATTGCAATTT
GGAATTACGATGGTAGAATTACATTTCAAGACATGATTGAAGCCACTGAG
GATTTCGATATCAAATACTGCATTGGAACCGGAGGCTACGACAGCGTTTA
CAGAGCACGACTACCCAGTGGAAAAGTGGTTGCTTTGAAGAAGCTTCACC
GTTTAGAAACTGAGTTAGCTTCCCTCGAGAGTTTCCAGAATGAGGCTCGT
CTACTGTCCCAAATACGGCATCGAAATATCGTAAAGCTTTACGGCTTTTG
TTTGCACGAGAAATGCATGTTCTTGATCTATGAGTACATGGAAATGGGAA
GCTTGTTCTGTATTCTACGCACAGATGAGGAAGCTGTTGGGTTGGATTGG
ACTAAAAGGGTGAACATTGTGAAGGGTATGGCCCATGCTTTGTCATACTT
GCATCATCACTGCACACCACCAATTCTTCACCGCGACATATCAAGCAACA
ACATTCTACTCAACTCAGAATTCGAAGCTTTTGTAGCTGACTTTGGCATT
GCTAGATTGTTAAATTATGACTCATCCAATCGAACTCTGTTAGCTGGCAC
TTATGGATCTATTGCTCCAGAACTTGCCTACACCATGGTTGTGACAGAGA
AATATGATGTTTATAGCTTCGGAGTAGTGGCACTAGAAGTACTAATGGGA
AGCATCCAGAGAGCTCTCTCATCGTCATCTCGTCATGGATAAATATAAGC
TGATGA
back to top