FC923335

Overview
NameFC923335
Unique NameFC923335
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 161.384 bits (407), Expect = 4.886e-39
Identity = 94/210 (44.76%), Postives = 131/210 (62.38%), Query Frame = 2
Query:   77 QDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTL--LAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            +D++E  ++ +I   IG GG   VYR  +P+   VA+K+L    T  +    F  E + L +IRHR+IV+L G+  ++    L+YEYM  GSL  +L   +    L W  R  +    A  L YLHH C+P ILHRD+ SNNILL+S+FEA VADFG+A+ L   +++  +  +AG+YG IAPE AYT+ V EK DVYSFGVV LE++ G
Sbjct:  686 EDVLECLKEENI---IGKGGAGIVYRGSMPNNVDVAIKRLVGRGTGRSD-HGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGG-HLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAG 890          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.335e-39
Identity = 95/225 (42.22%), Postives = 137/225 (60.89%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILR-TDEEAVG-LDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLN-YDSSNRTLLAGTYGS---IAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRALS 721
            ++   D+++ATE+F     I TG   ++Y+ RL  G ++ +K   RL+    S + F  E + L  +++RN+V L G+C+  K   L+YEYM  G L+  L   DEE+   LDW  R+ I  G A  L++LHH C P I+HR+ISS  ILL +EFE  ++DFG+ARL+N  D+   T + G +G    +APE + TMV T K DVYSFGVV LE++ G  Q+A S
Sbjct:  290 KMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIK---RLQDSQRSEKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTG--QKATS 509          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.335e-39
Identity = 95/224 (42.41%), Postives = 131/224 (58.48%), Query Frame = 2
Query:   53 NYDGRI-TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRAL 718
            N D +I T +DM EAT  +D+   +G GG  +VY+  LP   +VA+KK    +     +E F NE  +LSQI HRN+VKL G CL  +   L+YE++  GSLF  L        L W  R+ I   +A A++YLH   + PI+HRDI + NILL+    A VADFG ++L   D     T++ GT G + PE   T ++ EK DVYSFGVV +E++ G  Q+AL
Sbjct:   90 NIDFKIFTEEDMKEATNGYDVSRILGQGGQWTVYKGILPDNSIVAIKKTRLGDNN--QVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITGGSLFDHLHGSMFVSSLTWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISG--QKAL 309          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.335e-39
Identity = 88/215 (40.93%), Postives = 134/215 (62.33%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEA-VGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTL--LAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            ++TF D+++AT  F     IG+GG+  VY+A L  G  VA+KKL  +  +      F  E   + +I+HRN+V L G+C       L+YE+M+ GSL  +L   ++A V L+W+ R  I  G A  L++LHH+C+P I+HRD+ S+N+LL+   EA V+DFG+ARL++   ++ ++  LAGT G + PE   +   + K DVYS+GVV LE+L G
Sbjct:  870 KLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQ--GDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTG 1082          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.422e-38
Identity = 89/217 (41.01%), Postives = 133/217 (61.29%), Query Frame = 2
Query:   62 GRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEA--VGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNR--TLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            G  T + +  AT++FD+   IG GG+ SVY+  L  GK++A+K+L     +      F NE  ++S ++H N+VKLYG C+    + L+YEY+E   L   L   +E+  + LDW+ R  I  G+A  L++LH      I+HRDI ++N+LL+ +  A ++DFG+A+ LN D +    T +AGT G +APE A    +TEK DVYSFGVVALE++ G
Sbjct:  664 GTFTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQ--GNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAK-LNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSG 877          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.422e-38
Identity = 90/225 (40.00%), Postives = 136/225 (60.44%), Query Frame = 2
Query:   44 AIWNYDG----RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTL--LAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            A ++Y G    R  F+ ++ AT+DF  +  IG GG+ SVY+ +LP G+ +A+K+L R   +   +E F+NE  LL++++HRN+VKL GFC       L+YE++   SL   +  +E+ + L W  R  I++G+A  L YLH      I+HRD+ ++NILL++     VADFG+ARL N D +      + GT+G +APE       + K DVYSFGVV LE++ G
Sbjct:  315 AQYDYGGQSKLRFDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQ-GEIE-FRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITG 537          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.857e-38
Identity = 83/209 (39.71%), Postives = 131/209 (62.68%), Query Frame = 2
Query:   77 QDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            +++ +AT++F +K  +G G   +VY+  +  GK++A+K+   ++ +   LE F NE  LLSQI HRNIVKL G CL  +   L+YEY+  G +F  L  + +   + W  R+ I   +A AL+Y+H   + PI HRDI + NILL+ ++ A V+DFG +R +  D ++  T++AGT+G + PE   +   T+K DVYSFGVV +E++ G
Sbjct:  423 EELKKATDNFSVKRVLGKGSQGTVYKGMMVDGKIIAVKRSKVVDED--KLEKFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLHDESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITG 629          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.857e-38
Identity = 89/222 (40.09%), Postives = 133/222 (59.91%), Query Frame = 2
Query:   77 QDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGS--IQRALSSSSR 733
            +++ +AT++F I   +G GG  +VY+  L  G +VA+K+   ++ +   +E F NE  LLSQI HRNIVKL G CL  +   L+YEY+  G LF  L  + +   + W  R+ I   +A AL+Y+H   + PI HRDI + NILL+ ++ A V+DFG +R +  D ++  TL+AGT+G + PE   +   T K DVYSFGVV +E++ G   + R  S   R
Sbjct:  420 KELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVKRSKVVDED--KMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGR 639          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.136e-38
Identity = 85/211 (40.28%), Postives = 124/211 (58.77%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            TF+++  AT+ F  K  +G GG+ +VYR +   G VVA+K+L  +     + + F+ E  ++S   HRN+++L G+C       L+Y YM  GS+   L+       LDW  R  I  G A  L YLH  C P I+HRD+ + NILL+  FEA V DFG+A+LLN++ S+  T + GT G IAPE   T   +EK DV+ FG++ LE++ G
Sbjct:  288 TFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQ-FRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAKP---ALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 494          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.136e-38
Identity = 94/224 (41.96%), Postives = 132/224 (58.93%), Query Frame = 2
Query:   53 NYDGRI-TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRAL 718
            N D +I T + M EAT+ +D    +G GG  +VY+  LP   +VA+KK    +   + +E F NE  +LSQI HRN+VKL G CL  +   L+YE++  G+LF  L        L W  R+ +   +A  L+YLH   + PI+HRDI + NILL+    A VADFG +RL+  D  +  T++ GT G + PE   T ++ EK DVYSFGVV +E+L G  Q+AL
Sbjct:  392 NVDVKIFTEEGMKEATDGYDENRILGQGGQGTVYKGILPDNSIVAIKKARLGDN--SQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSG--QKAL 611          
The following BLAST results are available for this feature:
BLAST of FC923335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLV1_ARATH4.886e-3944.76Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y5838_ARATH8.335e-3942.22Probably inactive leucine-rich repeat receptor-lik... [more]
WAKLS_ARATH8.335e-3942.41Putative wall-associated receptor kinase-like 16 O... [more]
BRI1_ARATH8.335e-3940.93Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
Y1765_ARATH1.422e-3841.01Probable LRR receptor-like serine/threonine-protei... [more]
CRK38_ARATH1.422e-3840.00Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
WAKLE_ARATH1.857e-3839.71Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
WAKLA_ARATH1.857e-3840.09Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
Y2239_ARATH4.136e-3840.28Probable LRR receptor-like serine/threonine-protei... [more]
WAK4_ARATH4.136e-3841.96Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC31703H11EF StrClemenN Citrus clementina cDNA clone C31703H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923335 ID=FC923335; Name=FC923335; organism=Citrus clementina; type=EST; length=756bp
AACAACTGGGACAGTAGAAATTACCAAGTGCGCTGATGAGATTGCAATTT
GGAATTACGATGGTAGAATTACATTTCAAGACATGATTGAAGCCACTGAG
GATTTCGATATCAAATACTGCATTGGAACCGGAGGCTACGACAGCGTTTA
CAGAGCACGACTACCCAGTGGAAAAGTGGTTGCTTTGAAGAAGCTTCACC
GTTTAGAAACTGAGTTAGCTTCCCTCGAGAGTTTCCAGAATGAGGCTCGT
CTACTGTCCCAAATACGGCATCGAAATATCGTAAAGCTTTACGGCTTTTG
TTTGCACGAGAAATGCATGTTCTTGATCTATGAGTACATGGAAATGGGAA
GCTTGTTCTGTATTCTACGCACAGATGAGGAAGCTGTTGGGTTGGATTGG
ACTAAAAGGGTGAACATTGTGAAGGGTATGGCCCATGCTTTGTCATACTT
GCATCATCACTGCACACCACCAATTCTTCACCGCGACATATCAAGCAACA
ACATTCTACTCAACTCAGAATTCGAAGCTTTTGTAGCTGACTTTGGCATT
GCTAGATTGTTAAATTATGACTCATCCAATCGAACTCTGTTAGCTGGCAC
TTATGGATCTATTGCTCCAGAACTTGCCTACACCATGGTTGTGACAGAGA
AATATGATGTTTATAGCTTCGGAGTAGTGGCACTAGAAGTACTAATGGGA
AGCATCCAGAGAGCTCTCTCATCGTCATCTCGTCATGGATAAATATAAGC
TGATGA
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