FC923335

Overview
NameFC923335
Unique NameFC923335
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.573e-37
Identity = 85/235 (36.17%), Postives = 139/235 (59.15%), Query Frame = 2
Query:    2 TTGTVEITKCADEIAIWNYDGRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            T  T   ++  D++A  +   ++ ++ +  AT DF     IG GG+  VY+    +GK VA+K+L +   +  +   F+ E  ++++++HRN+V+L GF L  +   L+YEYM   SL C+L    + + LDW +R NI+ G+A  + YLH      I+HRD+ ++NILL+++    +ADFG+AR+   D +  N + + GTYG +APE A     + K DVYSFGV+ LE++ G
Sbjct:  318 TFDTASASEVGDDMATAD-SLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEA--EFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQIQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISG 549          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.973e-37
Identity = 88/223 (39.46%), Postives = 132/223 (59.19%), Query Frame = 2
Query:   38 EIAIWNYDGRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVG-LDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            EI+   +    T +D+  AT  F     +G GGY  VYR +L +G  VA+KKL  L     + + F+ E   +  +RH+N+V+L G+C+      L+YEY+  G+L   L       G L W  R+ I+ G A AL+YLH    P ++HRDI ++NIL++ EF A ++DFG+A+LL+   S+  T + GT+G +APE A T ++ EK D+YSFGV+ LE + G
Sbjct:  161 EISHLGWGHWFTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKL--LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITG 381          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 5.973e-37
Identity = 86/210 (40.95%), Postives = 130/210 (61.90%), Query Frame = 2
Query:   74 FQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            ++++ +AT+ F  K  +G G Y +VYR +L + + VA+K+L   ++E  SL+   NE +LLS + H N+V+L G C+ +    L+YEYM  G+L   L+ D  + GL WT R+ +    A A++YLH    PPI HRDI S NILL+ +F + VADFG++RL   +SS+  T   GT G + P+      +++K DVYSFGVV  E++ G
Sbjct:  338 YKEIEKATDGFSEKQKLGIGAYGTVYRGKLQNDEWVAIKRLRHRDSE--SLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGS-GLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITG 544          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.973e-37
Identity = 88/208 (42.31%), Postives = 124/208 (59.62%), Query Frame = 2
Query:   80 DMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            D+  AT+ F+    +G GG  +VY+  L  G +VA+KK   L+ E  +LE F NE  LLSQI HRN+VK+ G CL  +   L+YE++   +LF  L    E   + W  R+ I   +A ALSYLH   + PI HRD+ S NILL+ +  A V+DFGI+R +  D ++  T++ GT G + PE   +   T K DVYSFGV+ +E+L G
Sbjct:  382 DLENATDRFNASRILGQGGQGTVYKGMLEDGMIVAVKKSKALKEE--NLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHNPSEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTG 587          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.801e-37
Identity = 86/212 (40.57%), Postives = 130/212 (61.32%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDE-EAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            T +++ +ATE+F     +G GG  +VY+  L  G+ VA+KK   ++ +   L+ F NE  +LSQI HR++VKL G CL  +   L+YE++  G+LF  +  +E +   + W  R+ I   +A ALSYLH   + PI HRDI S NILL+ ++ A VADFG +R +  D ++  T+++GT G + PE   +   TEK DVYSFGV+  E++ G
Sbjct:  433 TSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDED--KLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITG 642          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.801e-37
Identity = 94/234 (40.17%), Postives = 135/234 (57.69%), Query Frame = 2
Query:   53 NYDGRI-TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRAL----SSSSRH 736
            N D +I T + M EAT+ ++    +G GG  +VY+  L    +VA+KK      + + +E F NE  +LSQI HRN+VKL G CL  +   L+YE++  G+LF  L        L W  R+ I   +A  L+YLH + + PI+HRD+ + NILL+    A VADFG +RL+  D     T++ GT G + PE   T ++ EK DVYSFGVV +E+L G  ++AL      SS+H
Sbjct:  390 NVDVKIFTEEGMKEATDGYNESRILGQGGQGTVYKGILQDNSIVAIKKARL--GDRSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRIAIEVAGTLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSG--EKALCFERPQSSKH 619          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.019e-36
Identity = 84/215 (39.07%), Postives = 130/215 (60.47%), Query Frame = 2
Query:   62 GRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLF-CILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            G  T + +  AT +FD +  IG GG+  VY+  L  G  +A+K+L     +      F  E  ++S ++H N+VKLYG C+  K + L+YEY+E  SL   +  T+++ + LDW+ R  I  G+A  L+YLH      I+HRDI + N+LL+    A ++DFG+A+L + ++++  T +AGT G +APE A    +T+K DVYSFGVV LE++ G
Sbjct:  655 GSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQ--GNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSG 867          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.019e-36
Identity = 91/224 (40.62%), Postives = 134/224 (59.82%), Query Frame = 2
Query:   77 QDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCL----HEKCMFLIYEYMEMGSLFCIL--RTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRALSSS 727
            +++ +AT +F  K  IG GG+  VY+  LP G V+A+KK+  +E+E      F+NE  ++S ++HRN+V L G  +     E   +L+Y+YM  G+L   L  R +   + L W +R +I+  +A  L+YLH+   P I HRDI   NILL+ +  A VADFG+A+      S+  T +AGT+G +APE A    +TEK DVYSFGVV LE++ G     LS+S
Sbjct:  286 EELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKV--IESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTS 507          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 1.019e-36
Identity = 96/234 (41.03%), Postives = 134/234 (57.26%), Query Frame = 2
Query:   53 NYDGRITFQD-MIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRAL----SSSSRH 736
            N D +I  +D M +AT  +     +G GG  +VY+  LP   +VA+KK    ++  + +E F NE  +LSQI HRN+VKL G CL  +   L+YE++  G+LF  L        L W  R+ I   +A  L+YLH   + PI+HRDI + NILL+    A VADFG +RL+  D     T++ GT G + PE   T ++ EK DVYSFGVV +E+L G  Q+AL      SS+H
Sbjct:  391 NVDVKIFTEDGMKKATNGYAESRILGQGGQGTVYKGILPDNSIVAIKKARLGDS--SQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSG--QKALCFKRPQSSKH 620          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 1.019e-36
Identity = 85/235 (36.17%), Postives = 138/235 (58.72%), Query Frame = 2
Query:    2 TTGTVEITKCADEIAIWNYDGRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            T  T   ++  D++A  +   ++ ++ +  AT DF     IG GG+  VY+    +GK VA+K+L +   +  +   F+ E  ++++++HRN+V+L GF L  +   L+YEYM   SL C+L    +   LDW +R NI+ G+A  + YLH      I+HRD+ ++NILL+++    +ADFG+AR+   D +  N + + GTYG +APE A     + K DVYSFGV+ LE++ G
Sbjct:  320 TFDTASASEVGDDMATAD-SLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEA--EFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISG 551          
The following BLAST results are available for this feature:
BLAST of FC923335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK6_ARATH4.573e-3736.17Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
Y2296_ARATH5.973e-3739.46Probable receptor-like protein kinase At2g42960 OS... [more]
WAKLO_ARATH5.973e-3740.95Wall-associated receptor kinase-like 14 OS=Arabido... [more]
WAKLG_ARATH5.973e-3742.31Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
WAKLM_ARATH7.801e-3740.57Wall-associated receptor kinase-like 17 OS=Arabido... [more]
WAK5_ARATH7.801e-3740.17Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
Y5343_ARATH1.019e-3639.07Probable LRR receptor-like serine/threonine-protei... [more]
Y1105_ARATH1.019e-3640.63Probable receptor-like protein kinase At1g11050 OS... [more]
WAK1_ARATH1.019e-3641.03Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
CRK8_ARATH1.019e-3636.17Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31703H11EF StrClemenN Citrus clementina cDNA clone C31703H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923335 ID=FC923335; Name=FC923335; organism=Citrus clementina; type=EST; length=756bp
AACAACTGGGACAGTAGAAATTACCAAGTGCGCTGATGAGATTGCAATTT
GGAATTACGATGGTAGAATTACATTTCAAGACATGATTGAAGCCACTGAG
GATTTCGATATCAAATACTGCATTGGAACCGGAGGCTACGACAGCGTTTA
CAGAGCACGACTACCCAGTGGAAAAGTGGTTGCTTTGAAGAAGCTTCACC
GTTTAGAAACTGAGTTAGCTTCCCTCGAGAGTTTCCAGAATGAGGCTCGT
CTACTGTCCCAAATACGGCATCGAAATATCGTAAAGCTTTACGGCTTTTG
TTTGCACGAGAAATGCATGTTCTTGATCTATGAGTACATGGAAATGGGAA
GCTTGTTCTGTATTCTACGCACAGATGAGGAAGCTGTTGGGTTGGATTGG
ACTAAAAGGGTGAACATTGTGAAGGGTATGGCCCATGCTTTGTCATACTT
GCATCATCACTGCACACCACCAATTCTTCACCGCGACATATCAAGCAACA
ACATTCTACTCAACTCAGAATTCGAAGCTTTTGTAGCTGACTTTGGCATT
GCTAGATTGTTAAATTATGACTCATCCAATCGAACTCTGTTAGCTGGCAC
TTATGGATCTATTGCTCCAGAACTTGCCTACACCATGGTTGTGACAGAGA
AATATGATGTTTATAGCTTCGGAGTAGTGGCACTAGAAGTACTAATGGGA
AGCATCCAGAGAGCTCTCTCATCGTCATCTCGTCATGGATAAATATAAGC
TGATGA
back to top