FC923335

Overview
NameFC923335
Unique NameFC923335
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36
Identity = 85/210 (40.48%), Postives = 129/210 (61.43%), Query Frame = 2
Query:   77 QDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDE-EAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            +++ +ATE+F     +G GG  +VY+  L  G+ VA+KK   ++ +   L+ F NE  +LSQI HR++VKL G CL  +   L+YE++  G+LF  +  +E +   + W  R+ I   +A ALSYLH   + PI HRDI S NILL+ ++ A VADFG +R +  D ++  T+++GT G + PE   +   TEK DVYSFGV+  E++ G
Sbjct:  444 RELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDED--KLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITG 651          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36
Identity = 83/215 (38.60%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTL--LAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGS 703
            R +++++++AT  F ++  +G G   +VY+  L   + VA+KKL  +       E FQ E  ++ +I H N+V+++GFC       L+ EY+E GSL  IL ++   + LDW  R NI  G+A  L+YLHH C   ++H D+   NILL+  FE  + DFG+ +LLN   S + +  + GT G IAPE   ++ +T K DVYS+GVV LE+L G+
Sbjct:  523 RYSYRELVKATRKFKVE--LGRGESGTVYKGVLEDDRHVAVKKLENVRQ---GKEVFQAELSVIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGSLANILFSEGGNILLDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTGT 732          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.738e-36
Identity = 83/215 (38.60%), Postives = 129/215 (60.00%), Query Frame = 2
Query:   62 GRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLF-CILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            G  T + +  AT +FD +  IG GG+  VY+  L  G  +A+K+L     +      F  E  ++S ++H N+VKLYG C+  K + L+YEY+E  SL   +  T+++ + LDW+ R  +  G+A  L+YLH      I+HRDI + N+LL+    A ++DFG+A+L   ++++  T +AGT G +APE A    +T+K DVYSFGVV LE++ G
Sbjct:  653 GSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQ--GNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSG 865          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.270e-36
Identity = 91/224 (40.62%), Postives = 130/224 (58.04%), Query Frame = 2
Query:   53 NYDGRI-TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRAL 718
            N D +I T + M EAT  +D    +G GG  +VY+  LP   +VA+KK    ++    ++ F +E  +LSQI HRN+VK+ G CL  +   L+YE++  G+LF  L        L W  R+ I   +A  L+YLH   + PI+HRDI + NILL+    A VADFG ++L+  D     T++ GT G + PE   T ++ EK DVYSFGVV +E+L G  Q+AL
Sbjct:  397 NIDFKIFTEEGMKEATNGYDESRILGQGGQGTVYKGILPDNTIVAIKKARLADSR--QVDQFIHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFITNGTLFDHLHGSIFDSSLTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSG--QKAL 616          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.270e-36
Identity = 84/229 (36.68%), Postives = 133/229 (58.08%), Query Frame = 2
Query:   23 TKCADEIAIWNYDGRI-TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            TK   E  I   D  +  F+ +  AT  F     +G GG+ +VY+ +L +G  VA+K+L +   +      F+NEA L+++++HRN+V+L GFCL  +   LIYE++   SL   L   E+   LDWT+R  I+ G+A  + YLH      I+HRD+ ++NILL+++    +ADFG+A +   + +  N   +AGTY  ++PE A     + K D+YSFGV+ LE++ G
Sbjct:  322 TKTESESDISTTDSLVYDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRLSKKSGQ--GTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISG 548          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.964e-36
Identity = 82/208 (39.42%), Postives = 130/208 (62.50%), Query Frame = 2
Query:   80 DMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            ++ +AT++F+    +G GG  +VY+  L  G++VA+K+   ++ +   +E F NE  +L+QI HRNIVKL G CL  +   L+YE++  G L   LR + +   + W  R++I   +A ALSYLH   + PI HRDI + NILL+ +++  V+DFG +R +  D ++  T +AGT+G + PE   +   T+K DVYSFGVV +E++ G
Sbjct:  416 ELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAMDED--KVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITG 621          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.872e-36
Identity = 86/211 (40.76%), Postives = 128/211 (60.66%), Query Frame = 2
Query:   77 QDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEA--VGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            +++ +AT++F +   +G GG  +VY+  L  G++VA+K+   +      +E F NE  LLSQI HRNIVKL G CL  +   L+YEY+  G LF  L    E+    + W  R+ I   +A ALSY+H   + PI HRDI + NILL+ ++ A V+DFG +R +    ++  TL+AGT+G + PE   +   T+K DVYSFGVV +E++ G
Sbjct:  423 KELKKATDNFSMNRVLGQGGQGTVYKGMLAEGRIVAVKRSKVVGE--GKMEEFINEVVLLSQINHRNIVKLLGCCLGTEVPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLTTLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITG 631          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.056e-36
Identity = 92/211 (43.60%), Postives = 128/211 (60.66%), Query Frame = 2
Query:   68 ITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTP-PILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTL-LAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVL 694
            I F D++ AT +FD +  IG GG+  VY+A LP G   A+K+  +  +    LE FQ E ++LS+IRHR++V L G+C     M L+YE+ME G+L   L        L W +R+ I  G A  L YLH   +   I+HRD+ S NILL+    A VADFG++++ N D SN ++ + GT+G + PE   T  +TEK DVY+FGVV LEVL
Sbjct:  476 IPFTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKR-GKTGSGQGILE-FQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHL-YGSNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVL 683          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 5.056e-36
Identity = 91/217 (41.94%), Postives = 122/217 (56.22%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-------RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            T+ ++  AT++F+    IG GGY  VY+  L SG VVA+K+    E  L   + F  E  LLS++ HRN+V L GFC  E    L+YEYME G+L   +    +   LD+  R+ I  G A  + YLH    PPI HRDI ++NILL+S F A VADFG++RL               T++ GT G + PE   T  +T+K DVYS GVV LE+  G
Sbjct:  614 TYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQ--EGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEP-LDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTG 827          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 5.056e-36
Identity = 82/209 (39.23%), Postives = 127/209 (60.77%), Query Frame = 2
Query:   77 QDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            +++ +AT++F     +G GG  +VY+  L  G+ VA+KK   ++ +   LE F NE  +LSQI HR++VKL G CL  +   L+YE++  G+LF  +  + +     W  R+ I   +A ALSYLH   + PI HRDI S NILL+ ++   V+DFG +R +  D ++  T+++GT G + PE   +   T+K DVYSFGVV +E++ G
Sbjct:  442 RELEKATDNFSESRILGQGGQGTVYKGMLVDGRTVAVKKSKVVDED--KLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITG 648          
The following BLAST results are available for this feature:
BLAST of FC923335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLN_ARATH1.331e-3640.48Wall-associated receptor kinase-like 18 OS=Arabido... [more]
KPRO_MAIZE1.331e-3638.60Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
Y5344_ARATH1.738e-3638.60Probable LRR receptor-like serine/threonine-protei... [more]
WAK3_ARATH2.270e-3640.63Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
CRK11_ARATH2.270e-3636.68Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
WAKLD_ARATH2.964e-3639.42Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
WAKLF_ARATH3.872e-3640.76Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
Y2232_ARATH5.056e-3643.60Probable receptor-like protein kinase At2g23200 OS... [more]
Y1684_ARATH5.056e-3641.94Probable LRR receptor-like serine/threonine-protei... [more]
WAKLK_ARATH5.056e-3639.23Putative wall-associated receptor kinase-like 11 O... [more]

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Properties
Property NameValue
Genbank descriptionC31703H11EF StrClemenN Citrus clementina cDNA clone C31703H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923335 ID=FC923335; Name=FC923335; organism=Citrus clementina; type=EST; length=756bp
AACAACTGGGACAGTAGAAATTACCAAGTGCGCTGATGAGATTGCAATTT
GGAATTACGATGGTAGAATTACATTTCAAGACATGATTGAAGCCACTGAG
GATTTCGATATCAAATACTGCATTGGAACCGGAGGCTACGACAGCGTTTA
CAGAGCACGACTACCCAGTGGAAAAGTGGTTGCTTTGAAGAAGCTTCACC
GTTTAGAAACTGAGTTAGCTTCCCTCGAGAGTTTCCAGAATGAGGCTCGT
CTACTGTCCCAAATACGGCATCGAAATATCGTAAAGCTTTACGGCTTTTG
TTTGCACGAGAAATGCATGTTCTTGATCTATGAGTACATGGAAATGGGAA
GCTTGTTCTGTATTCTACGCACAGATGAGGAAGCTGTTGGGTTGGATTGG
ACTAAAAGGGTGAACATTGTGAAGGGTATGGCCCATGCTTTGTCATACTT
GCATCATCACTGCACACCACCAATTCTTCACCGCGACATATCAAGCAACA
ACATTCTACTCAACTCAGAATTCGAAGCTTTTGTAGCTGACTTTGGCATT
GCTAGATTGTTAAATTATGACTCATCCAATCGAACTCTGTTAGCTGGCAC
TTATGGATCTATTGCTCCAGAACTTGCCTACACCATGGTTGTGACAGAGA
AATATGATGTTTATAGCTTCGGAGTAGTGGCACTAGAAGTACTAATGGGA
AGCATCCAGAGAGCTCTCTCATCGTCATCTCGTCATGGATAAATATAAGC
TGATGA
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