FC923335

Overview
NameFC923335
Unique NameFC923335
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.056e-36
Identity = 87/221 (39.37%), Postives = 123/221 (55.66%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRT-DEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLL-NYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRALSSS 727
            T   +  AT  F  +  IG G    VYRA  P+GK++A+KK+      L   ++F      +S++RH NIV L G+C       L+YEY+  G+L   L T D+ ++ L W  RV +  G A AL YLH  C P I+HR+  S NILL+ E    ++D G+A L  N +    T + G++G  APE A + + T K DVY+FGVV LE+L G  ++ L SS
Sbjct:  384 TVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTG--RKPLDSS 602          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 5.056e-36
Identity = 83/219 (37.90%), Postives = 131/219 (59.82%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRA 715
            ++ F+ +  ATE+F     +G GG+  VY+  L +G  VA+K+L +   + A  + F+NE  L+++++HRN+VKL G+CL  +   L+YE++   SL   L    +   LDWTKR NI+ G+   + YLH      I+HRD+ ++NILL+++    +ADFG+AR+   D S  N   +AGT+G + PE       + K DVYSFGV+ LE++ G   R+
Sbjct:  354 QLDFKTIEVATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSKTSEQGA--QEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKKNRS 570          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.604e-36
Identity = 81/214 (37.85%), Postives = 131/214 (61.21%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARL---LNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            T++++ +AT+ F  K  +GTG Y +VY    P+   VA+K+L   +T   S++   NE +LLS + H N+V+L G C  +   FL+YE+M  G+L+  L+ +     L W  R+ I    A+A+++LH    PPI HRDI S+NILL+ EF + ++DFG++RL    ++++S+  T   GT G + P+      +++K DVYSFGVV +E++ G
Sbjct:  301 TYKEIEKATDSFSDKNMLGTGAYGTVYAGEFPNSSCVAIKRLKHKDT--TSIDQVVNEIKLLSSVSHPNLVRLLGCCFADGEPFLVYEFMPNGTLYQHLQHERGQPPLSWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISG 512          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.604e-36
Identity = 84/208 (40.38%), Postives = 127/208 (61.06%), Query Frame = 2
Query:   80 DMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            ++ +AT++F+    +G GG  +VY+  L  G++VA+K+   ++ +   +E F NE  +L+QI HRNIVKL G CL  +   L+YE++  G L   L  + +   + W  R++I   +A ALSYLH   + PI HRDI + NILL+    A V+DFG +R +  D ++  T +AGT+G + PE   +   TEK DVYSFGVV +E+L G
Sbjct:  408 ELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAVDED--RVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTG 613          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 8.625e-36
Identity = 89/213 (41.78%), Postives = 125/213 (58.69%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN---RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            T+ ++  AT+DFD    +G GG+  VY+  L  G+VVA+K L     +      F  E   +S + HRN+VKLYG C   +   L+YEY+  GSL   L  D+  + LDW+ R  I  G+A  L YLH   +  I+HRD+ ++NILL+S     ++DFG+A+L  YD       T +AGT G +APE A    +TEK DVY+FGVVALE++ G
Sbjct:  683 TYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQ--GKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDK-TLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKL--YDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSG 890          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.126e-35
Identity = 86/216 (39.81%), Postives = 126/216 (58.33%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRA 715
            +++++  AT+ F  K  +G GG  SVY+  L +GK VA+K+L     +   ++ F NE  L+SQ+ H+N+VKL G  +      L+YEY+   SL   L   ++   L+W KR  I+ G A  ++YLH      I+HRDI  +NILL  +F   +ADFG+ARL   D ++  T +AGT G +APE      +TEK DVYSFGV+ +EV+ G    A
Sbjct:  312 SYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVAVKRLFFNTKQW--VDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNA 525          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.126e-35
Identity = 81/211 (38.39%), Postives = 129/211 (61.14%), Query Frame = 2
Query:   74 FQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNRTL--LAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            F+ +  AT+DF +   IG GG+  VY+  LP G  +A+K+L  + +   + E F+ E  L+++++H+N+VKL+GF + E    L+YE++   SL   L    +   LDW KR NI+ G++  L YLH     PI+HRD+ S+N+LL+ +    ++DFG+AR  ++D++      + GTYG +APE A     + K DVYSFGV+ LE++ G
Sbjct:  323 FETIRVATDDFSLTNKIGEGGFGVVYKGHLPDGLEIAVKRLS-IHSGQGNAE-FKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITG 531          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.126e-35
Identity = 81/214 (37.85%), Postives = 128/214 (59.81%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            ++ ++ +  AT+DF     IG GG+  VY+  L  G  VA+K+L +   +      F+NE  L+++++HRN+V+L GFCL  +   L+YEY+   SL   L    +   LDWT+R  I+ G+A  + YLH      I+HRD+ ++NILL+++    +ADFG+AR+   D +  N + + GTYG ++PE A     + K DVYSFGV+ LE++ G
Sbjct:  324 QLDYRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQ--GEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISG 535          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.471e-35
Identity = 87/225 (38.67%), Postives = 130/225 (57.78%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVG---LDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRALSSS 727
            R  ++++  AT++F  K  +G GG+  VY+  LP    VA+K+L   E+      +FQ E  ++S   HRN+++L GFC  +    L+Y +M+  SL   LR  E   G   LDW  R  I  G A    YLH HC P I+HRD+ + N+LL+ +FEA V DFG+A+L++   +N  T + GT G IAPE   T   +E+ DV+ +G++ LE++ G  QRA+  S
Sbjct:  277 RFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDA-AFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLR--EIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG--QRAIDFS 496          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.921e-35
Identity = 89/213 (41.78%), Postives = 126/213 (59.15%), Query Frame = 2
Query:   71 TFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN---RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            T+ ++  AT+DFD    +G GG+  VY+ +L  G+ VA+K L     +      F  E   +S ++HRN+VKLYG C   +   L+YEY+  GSL   L   E+ + LDW+ R  I  G+A  L YLH      I+HRD+ ++NILL+S+    V+DFG+A+L  YD       T +AGT G +APE A    +TEK DVY+FGVVALE++ G
Sbjct:  682 TYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQ--GKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQAL-FGEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKL--YDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSG 889          
The following BLAST results are available for this feature:
BLAST of FC923335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRF8_ARATH5.056e-3639.37Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
CRK12_ARATH5.056e-3637.90Putative cysteine-rich receptor-like protein kinas... [more]
WAKLR_ARATH6.604e-3637.85Wall-associated receptor kinase-like 21 OS=Arabido... [more]
WAKLB_ARATH6.604e-3640.38Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
Y1561_ARATH8.625e-3641.78Probable LRR receptor-like serine/threonine-protei... [more]
CRK3_ARATH1.126e-3539.81Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
CRK27_ARATH1.126e-3538.39Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK10_ARATH1.126e-3537.85Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
Y5129_ARATH1.471e-3538.67Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH1.921e-3541.78Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC31703H11EF StrClemenN Citrus clementina cDNA clone C31703H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923335 ID=FC923335; Name=FC923335; organism=Citrus clementina; type=EST; length=756bp
AACAACTGGGACAGTAGAAATTACCAAGTGCGCTGATGAGATTGCAATTT
GGAATTACGATGGTAGAATTACATTTCAAGACATGATTGAAGCCACTGAG
GATTTCGATATCAAATACTGCATTGGAACCGGAGGCTACGACAGCGTTTA
CAGAGCACGACTACCCAGTGGAAAAGTGGTTGCTTTGAAGAAGCTTCACC
GTTTAGAAACTGAGTTAGCTTCCCTCGAGAGTTTCCAGAATGAGGCTCGT
CTACTGTCCCAAATACGGCATCGAAATATCGTAAAGCTTTACGGCTTTTG
TTTGCACGAGAAATGCATGTTCTTGATCTATGAGTACATGGAAATGGGAA
GCTTGTTCTGTATTCTACGCACAGATGAGGAAGCTGTTGGGTTGGATTGG
ACTAAAAGGGTGAACATTGTGAAGGGTATGGCCCATGCTTTGTCATACTT
GCATCATCACTGCACACCACCAATTCTTCACCGCGACATATCAAGCAACA
ACATTCTACTCAACTCAGAATTCGAAGCTTTTGTAGCTGACTTTGGCATT
GCTAGATTGTTAAATTATGACTCATCCAATCGAACTCTGTTAGCTGGCAC
TTATGGATCTATTGCTCCAGAACTTGCCTACACCATGGTTGTGACAGAGA
AATATGATGTTTATAGCTTCGGAGTAGTGGCACTAGAAGTACTAATGGGA
AGCATCCAGAGAGCTCTCTCATCGTCATCTCGTCATGGATAAATATAAGC
TGATGA
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