FC923335

Overview
NameFC923335
Unique NameFC923335
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.921e-35
Identity = 83/209 (39.71%), Postives = 129/209 (61.72%), Query Frame = 2
Query:   77 QDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            +++ +AT++F+    IG GG  +VY+  L  G+ VA+KK + ++ +   L+ F NE  +LSQI HR++VKL G CL  +   L+YE++  G+LF  L  + +     W  R+ I   ++ A SYLH     PI HRDI S NILL+ ++ A V+DFG +R ++ D ++  T+++GT G + PE   +   TEK DVYSFGVV +E++ G
Sbjct:  445 RELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVKKSNVVDED--KLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITG 651          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.921e-35
Identity = 79/211 (37.44%), Postives = 129/211 (61.14%), Query Frame = 2
Query:   74 FQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD--SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            F  +  AT  F     +G GG+  VY+ +L +G+ VA+K+L +  T+ A  E F+NE  ++++++HRN+ KL G+CL  +   L+YE++   SL   L  +E+   LDW +R  I++G+A  + YLH      I+HRD+ ++NILL+++    ++DFG+AR+   D   +N   + GTYG ++PE A     + K DVYSFGV+ LE++ G
Sbjct:  337 FSAIEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGA--EEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITG 545          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.509e-35
Identity = 94/228 (41.23%), Postives = 130/228 (57.02%), Query Frame = 2
Query:   74 FQDMIEATEDFDIKYCIGTGGYDSVYRARLPS-GKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSL---FCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARL--LNYDSSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRALSSSSRHG 739
            F+++  AT +F     +G GG+  VY+ RL S G+VVA+K+L R    L     F  E  +LS + H N+V L G+C       L+YE+M +GSL      L  D+EA  LDW  R+ I  G A  L +LH    PP+++RD  S+NILL+  F   ++DFG+A+L      S   T + GTYG  APE A T  +T K DVYSFGVV LE++ G  ++A+ S   HG
Sbjct:   76 FRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDR--NGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEA--LDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG--RKAIDSEMPHG 297          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.509e-35
Identity = 81/211 (38.39%), Postives = 125/211 (59.24%), Query Frame = 2
Query:   74 FQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD--SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            F+ +  AT+ F +   +G GG+  VY+  LP+G  VA+K+L +  T     + F+NE  ++++++HRN+VKL GFCL  +   L+YE++   SL   L        LDWT R  I+ G+A  + YLH      I+HRD+ + NILL+++    VADFG+AR+   D   ++   + GTYG ++PE A     + K DVYSFGV+ LE++ G
Sbjct:  330 FKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLSK--TSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISG 538          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.509e-35
Identity = 91/234 (38.89%), Postives = 138/234 (58.97%), Query Frame = 2
Query:   17 EITKCADEIAIWNYDGRITFQD----MIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSS--NRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            EI K +D       DG+ T +     ++ AT +F ++  +G GG+ SVY+  LPSG+ +A+K+L     +   LE F+NE  LL++++HRN+VKL GFC       L+YE++   SL   +  +++   L W  R  I++G+A  L YLH      I+HRD+ ++NILL++E    VADFG+ARL N D +    + + GTYG +APE       + K DVYSFGV+ LE++ G
Sbjct:  313 EINKNSDS------DGQATLRFDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQ-GELE-FKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISG 538          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.277e-35
Identity = 82/205 (40.00%), Postives = 123/205 (60.00%), Query Frame = 2
Query:   92 ATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLF-CILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            AT +FD    IG GG+  VY+ +L  G ++A+K+L     +      F NE  ++S + H N+VKLYG C+    + L+YE++E  SL   +    E  + LDW  R  I  G+A  L+YLH      I+HRDI + N+LL+ +    ++DFG+A+L   DS++  T +AGT+G +APE A    +T+K DVYSFG+VALE++ G
Sbjct:  620 ATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQ--GNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHG 822          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.277e-35
Identity = 86/229 (37.55%), Postives = 133/229 (58.08%), Query Frame = 2
Query:   53 NYDGRITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN-RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQRALSSSSRH 736
            N   +  ++ + +AT+ F  K  +G GG  +V+   LP+GK VA+K+L  +      +E F NE  L+S I+H+N+VKL G  +      L+YEY+   SL   L  + ++  L+W++R+NI+ G A  L+YLH      I+HRDI ++N+LL+ +    +ADFG+AR    D ++  T +AGT G +APE      +TEK DVYSFGV+ LE+  G+   A    + H
Sbjct:  298 NSKTKFKYETLEKATDYFSHKKMLGQGGNGTVFLGILPNGKNVAVKRL--VFNTRDWVEEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTRINAFVPETGH 524          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.301e-35
Identity = 80/217 (36.87%), Postives = 126/217 (58.06%), Query Frame = 2
Query:   68 ITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYD--SSNRTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMGSIQR 712
            I  + +++ATE+F     +G GG+  VY+ RL  GK +A+K+L +  T +   + F NE  L+++++H N+V++ G C+      LIYEY+E  SL   L        L+W +R +I  G+A  L YLH      I+HRD+  +NILL+      ++DFG+AR+   D   +N   + GTYG ++PE A   + +EK DV+SFGV+ LE++ G   R
Sbjct:  516 IEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSK--TSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNR 730          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 9.536e-35
Identity = 88/225 (39.11%), Postives = 124/225 (55.11%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGKVVALKKLH-----RLETELASLES------FQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVGLDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSNR--TLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVLMG 700
            R T+ ++   T +F+    IG GG+  VY   L  G  +A+K ++     + +   +S  S      FQ EA LL  + HRN+    G+C   + M LIYEYM  G+L   L + E A  L W KR++I    A  L YLHH C PPI+HRD+ + NILLN   EA +ADFG++++   D  +   T + GT G + PE   T  + EK DVYSFG+V LE++ G
Sbjct:  556 RFTYSEVSSITNNFN--KVIGKGGFGIVYLGSLEDGTEIAVKMINDSSFGKSKGSSSSSSSSQVSKEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYL-SSENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITG 777          
BLAST of FC923335 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.245e-34
Identity = 88/216 (40.74%), Postives = 127/216 (58.80%), Query Frame = 2
Query:   65 RITFQDMIEATEDFDIKYCIGTGGYDSVYRARLPSGK-VVALKKLHRLETELASLESFQNEARLLSQIRHRNIVKLYGFCLHEKCMFLIYEYMEMGSLFCILRTDEEAVG--LDWTKRVNIVKGMAHALSYLHHHCTPPILHRDISSNNILLNSEFEAFVADFGIARLLNYDSSN---RTLLAGTYGSIAPELAYTMVVTEKYDVYSFGVVALEVL 694
            R +  ++  AT DF+ K  IG GG+ SVY+ R+  G  +VA+K+L     + A  + F  E  +LS++RH ++V L G+C  +  M L+YEYM  G+L   L   ++A    L W +R+ I  G A  L YLH      I+HRDI + NILL+  F A V+DFG++R+    +S     T++ GT+G + PE     ++TEK DVYSFGVV LEVL
Sbjct:  512 RFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGA--KEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVL 725          
The following BLAST results are available for this feature:
BLAST of FC923335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLL_ARATH1.921e-3539.71Putative wall-associated receptor kinase-like 13 O... [more]
CRK25_ARATH1.921e-3537.44Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
PBS1_ARATH2.509e-3541.23Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
CRK5_ARATH2.509e-3538.39Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK36_ARATH2.509e-3538.89Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y1534_ARATH3.277e-3540.00Probable LRR receptor-like serine/threonine-protei... [more]
CRK42_ARATH3.277e-3537.55Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
SRK6_BRAOE7.301e-3536.87Putative serine/threonine-protein kinase receptor ... [more]
Y4291_ARATH9.536e-3539.11Probable LRR receptor-like serine/threonine-protei... [more]
Y5389_ARATH1.245e-3440.74Probable receptor-like protein kinase At5g38990 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31703H11EF StrClemenN Citrus clementina cDNA clone C31703H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923335 ID=FC923335; Name=FC923335; organism=Citrus clementina; type=EST; length=756bp
AACAACTGGGACAGTAGAAATTACCAAGTGCGCTGATGAGATTGCAATTT
GGAATTACGATGGTAGAATTACATTTCAAGACATGATTGAAGCCACTGAG
GATTTCGATATCAAATACTGCATTGGAACCGGAGGCTACGACAGCGTTTA
CAGAGCACGACTACCCAGTGGAAAAGTGGTTGCTTTGAAGAAGCTTCACC
GTTTAGAAACTGAGTTAGCTTCCCTCGAGAGTTTCCAGAATGAGGCTCGT
CTACTGTCCCAAATACGGCATCGAAATATCGTAAAGCTTTACGGCTTTTG
TTTGCACGAGAAATGCATGTTCTTGATCTATGAGTACATGGAAATGGGAA
GCTTGTTCTGTATTCTACGCACAGATGAGGAAGCTGTTGGGTTGGATTGG
ACTAAAAGGGTGAACATTGTGAAGGGTATGGCCCATGCTTTGTCATACTT
GCATCATCACTGCACACCACCAATTCTTCACCGCGACATATCAAGCAACA
ACATTCTACTCAACTCAGAATTCGAAGCTTTTGTAGCTGACTTTGGCATT
GCTAGATTGTTAAATTATGACTCATCCAATCGAACTCTGTTAGCTGGCAC
TTATGGATCTATTGCTCCAGAACTTGCCTACACCATGGTTGTGACAGAGA
AATATGATGTTTATAGCTTCGGAGTAGTGGCACTAGAAGTACTAATGGGA
AGCATCCAGAGAGCTCTCTCATCGTCATCTCGTCATGGATAAATATAAGC
TGATGA
back to top