FC923352

Overview
NameFC923352
Unique NameFC923352
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_BRUA1 (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Brucella abortus (strain S19) GN=ubiE PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.283e-35
Identity = 82/164 (50.00%), Postives = 108/164 (65.85%), Query Frame = 2
Query:  212 SFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPF--PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKALA 697
            SFGFK V   EK  LV++VF  VAK YD+MNDLMS G+HR+WKD +V+ L P   PG   LDVAGGTGD+AFRI++                    +  + + DIN +ML VG++RA+++G  D +L +VE +AE L FED++ D YTIAFGIRN  HI+KAL+
Sbjct:   26 SFGFKAVDENEKQGLVNDVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIAFRIVEASG----------------RQAHVTILDINGSMLGVGRERAIKKGLID-NLEFVEANAEELPFEDNSFDAYTIAFGIRNVPHIDKALS 172          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_OCHA4 (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=ubiE PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.419e-34
Identity = 79/164 (48.17%), Postives = 106/164 (64.63%), Query Frame = 2
Query:  212 SFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPF--PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKALA 697
            SFGFK V   EK  LV++VF  VA  YD+MNDLMS G+HR+WKD +++ L P   PG   LDVAGGTGD+AFRI++                    +  + + DIN +ML VG++RA+++G  D +L +VE  AE L FED++ D YTI+FGIRN  HI+KAL+
Sbjct:   20 SFGFKAVDESEKQGLVNDVFHKVASKYDVMNDLMSAGMHRVWKDAMIAWLAPSKRPGWTSLDVAGGTGDIAFRIVEASG----------------RQAHVTILDINGSMLGVGRERAIKKGLAD-NLEFVEASAEELPFEDASFDAYTISFGIRNVPHIDKALS 166          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_BRASO (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Bradyrhizobium sp. (strain ORS278) GN=ubiE PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.392e-34
Identity = 82/166 (49.40%), Postives = 104/166 (62.65%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPG---MKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKALA 697
            T FGF++VP  EK  LV++VF SVA  YDLMNDLMSGGLHR+WKD +++ LNP         LDVAGGTGD++FR      +                     VCDIN +ML VG++RAL++ Y D  + +VEG+AE+L F D + D YTIAFGIRN   I+ ALA
Sbjct:    8 THFGFRDVPLGEKQTLVNDVFHSVASRYDLMNDLMSGGLHRVWKDIMINTLNPPKSDAPFALLDVAGGTGDISFRAAKKAGA----------------GFHATVCDINGDMLEVGRQRALKQ-YLDDRVSFVEGNAESLAFPDRSFDAYTIAFGIRNVPQIDLALA 156          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_RHILO (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Rhizobium loti GN=ubiE PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 84/165 (50.91%), Postives = 102/165 (61.82%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNP--FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKALA 697
            TS+GFK V   EK  LV++VF  VA  YDLMNDLMS GLHRLWKD +V+ LNP   PG K LDVAGGTGD+AFRI+D  +                      V DIN +ML VG+ RA ++G    +  +VE +AE L F D+T D YTIAFGIRN   I+ AL+
Sbjct:   14 TSYGFKRVGEGEKQSLVNDVFHKVANRYDLMNDLMSAGLHRLWKDAMVTWLNPPKRPGWKVLDVAGGTGDIAFRIVDASHG----------------NAHATVLDINGSMLGVGRDRAQKKGLSGNT-DFVEANAEELPFADATFDAYTIAFGIRNVPRIDVALS 161          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_RHOPT (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Rhodopseudomonas palustris (strain TIE-1) GN=ubiE PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33
Identity = 80/165 (48.48%), Postives = 106/165 (64.24%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNP---FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            T FG+++VP +EK  LV++VF SVA  YDLMNDLMSGG+HRLWKD +++ LNP       + LDVAGGTGD++FR      +                     VCDIN +ML VG++RA+ER   D+ + +VEG+AE+L F+D + D YTIAFGIRN   I+ AL
Sbjct:    8 THFGYRDVPLDEKQTLVNDVFHSVAGRYDLMNDLMSGGMHRLWKDVMITTLNPPRDDTPFRLLDVAGGTGDISFRAAKASGA----------------GFHSTVCDINTDMLEVGRQRAVERNLDDK-VDFVEGNAESLQFDDRSFDAYTIAFGIRNVPRIDLAL 155          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_RHOPA (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Rhodopseudomonas palustris GN=ubiE PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33
Identity = 80/165 (48.48%), Postives = 106/165 (64.24%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNP---FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            T FG+++VP +EK  LV++VF SVA  YDLMNDLMSGG+HRLWKD +++ LNP       + LDVAGGTGD++FR      +                     VCDIN +ML VG++RA+ER   D+ + +VEG+AE+L F+D + D YTIAFGIRN   I+ AL
Sbjct:    8 THFGYRDVPLDEKQTLVNDVFHSVAGRYDLMNDLMSGGMHRLWKDVMITTLNPPRDDTPFRLLDVAGGTGDISFRAAKASGA----------------GFHSTVCDINTDMLEVGRQRAVERNLDDK-VDFVEGNAESLQFDDRSFDAYTIAFGIRNVPRIDLAL 155          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_RHOP2 (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Rhodopseudomonas palustris (strain HaA2) GN=ubiE PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33
Identity = 80/165 (48.48%), Postives = 106/165 (64.24%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNP---FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            T FG+++VP ++K  LV++VF SVA  YDLMNDLMSGG+HRLWKD +++ LNP       + LDVAGGTGD++FR      +                  +  VCDIN +ML VG++RA+ER + D  + +VEG+AEAL F D + D YTIAFGIRN   I+ AL
Sbjct:    8 THFGYRDVPLQDKQTLVNDVFHSVASRYDLMNDLMSGGMHRLWKDVMITTLNPPRDDQPFRLLDVAGGTGDISFRAAKASGA----------------GFQATVCDINTDMLEVGRQRAVER-HLDGQVEFVEGNAEALQFPDKSYDAYTIAFGIRNVPRIDLAL 155          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_PARDP (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Paracoccus denitrificans (strain Pd 1222) GN=ubiE PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33
Identity = 81/163 (49.69%), Postives = 97/163 (59.51%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKALA 697
            T FGF+ V  ++K+ LV  VFS VA  YD+MNDLMSGG+HR+WK  ++  L P  G   LDVAGGTGD+AFR LD                      R+ VCD+  +ML  G+KRA E G Q   L WV GDA AL F D + D YTI+FGIRN T I  ALA
Sbjct:    9 THFGFRTVAEKDKAGLVHGVFSRVASRYDVMNDLMSGGVHRIWKTAMMDWLAPRDGQHLLDVAGGTGDIAFRFLDRAPG-----------------ARVTVCDMTESMLVEGRKRA-EAGKQADRLAWVTGDAMALPFADDSFDRYTISFGIRNVTRIPDALA 153          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_RHIEC (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ubiE PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33
Identity = 81/165 (49.09%), Postives = 104/165 (63.03%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNP--FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKALA 697
            TS+GF+EVP  EK  LV+ VF  VAK YD+MND+MS G+HR WKD +++ LNP   PG K LDVAGGTGD+AFRI++                    +    V DIN +ML VG +RA E+     +L +VE +AE L FE ++ D YTIAFGIRN   I+KAL+
Sbjct:   14 TSYGFREVPGGEKQGLVNQVFHKVAKRYDIMNDVMSMGMHRAWKDAMIAALNPRKEPGYKVLDVAGGTGDIAFRIVEASG----------------RQAHATVLDINGSMLGVGAERA-EKKKLSGNLTFVEANAEELPFEAASFDAYTIAFGIRNVPRIDKALS 161          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_AGRVS (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=ubiE PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33
Identity = 80/165 (48.48%), Postives = 106/165 (64.24%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNP--FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKALA 697
            TS+GF++V   EK  LV++VF  VAK YD+MND+MS G+HR+WKD L++ LNP    G K LDVAGGTGD+AFRI++    +                    V DIN +ML VG++RA ++G  D +L +VE +AEAL FE +  D YTIAFGIRN   I+ AL+
Sbjct:   14 TSYGFRDVAEGEKQGLVNDVFHKVAKRYDIMNDVMSAGMHRVWKDALIAALNPRKDAGYKVLDVAGGTGDIAFRIIEASRRLAHAT----------------VLDINGSMLGVGQERAQKKGLSD-NLTFVEANAEALPFEANQFDAYTIAFGIRNVPRIDVALS 161          
The following BLAST results are available for this feature:
BLAST of FC923352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
UBIE_BRUA11.283e-3550.00Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_OCHA41.419e-3448.17Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_BRASO5.392e-3449.40Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_RHILO1.201e-3350.91Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_RHOPT1.569e-3348.48Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_RHOPA1.569e-3348.48Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_RHOP21.569e-3348.48Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_PARDP1.569e-3349.69Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_RHIEC2.049e-3349.09Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_AGRVS2.049e-3348.48Ubiquinone/menaquinone biosynthesis methyltransfer... [more]

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Properties
Property NameValue
Genbank descriptionC31704B04EF StrClemenN Citrus clementina cDNA clone C31704B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923352 ID=FC923352; Name=FC923352; organism=Citrus clementina; type=EST; length=698bp
GAAGAACGAGGGAGAGTTGGAGAAGCGAATATTATTAGAACAGAGAGTGT
ACAGTTTTATTGGGCGCCCGTTACTGTTTCAAGGTTTTCAGCATCGATTG
CATTGTTAGAAAGTTGTTGAAGCCATGGCAGTGCGGGTGGTGACGAGGAA
TTTGGGGAGTAGACTCTTACCGATGCTCTCTTCCACTTCTTTACTGCATT
CACATGCTACAAGCTTCGGGTTCAAAGAAGTACCGGCAGAAGAAAAAAGT
CAATTGGTTAGCAATGTTTTCAGCAGTGTTGCTAAAAATTATGATCTCAT
GAATGATTTGATGAGTGGTGGATTGCATAGATTGTGGAAGGATAGACTTG
TTTCCAAGTTGAATCCATTTCCGGGAATGAAGCACCTTGATGTTGCTGGT
GGAACAGGGGATGTTGCTTTCAGGATTTTAGACACTGTAAATAGCATCAA
ACGAAGAGCACTCCAGGATGTTCTTGAAGATGATTTACAGGAGGAAACTC
GGATATATGTTTGTGACATCAACCCAAACATGCTAAATGTTGGTAAAAAG
CGTGCTTTAGAGAGAGGTTACCAGGACCAATCACTTTTGTGGGTGGAAGG
AGATGCAGAAGCCTTGTGCTTTGAAGACAGTACTATGGATGGTTACACNA
TTGCCTTCGGAATTAGGAATGGTACTCATATTGAGAAGGCTCTAGCTG
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