FC923352

Overview
NameFC923352
Unique NameFC923352
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_METNO (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=ubiE PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.517e-31
Identity = 83/168 (49.40%), Postives = 99/168 (58.93%), Query Frame = 2
Query:  206 ATSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNP--FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER--GYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKALA 697
            +T FGF  VP +EK   V+ VF SVA+ YD+MNDLMSGGLHR WK  L+S L P      + LDVAGGTGD+AFR L                     ET + V DIN  ML VG++RA +R  G  D    +V G+AEAL   D + D YTIAFGIRN   IE+ALA
Sbjct:    7 STDFGFARVPLDEKQGRVNEVFRSVARRYDVMNDLMSGGLHRAWKSALISALRPSRTRPFRLLDVAGGTGDIAFRALQAGG----------------PETHVTVLDINDAMLAVGRERAGDRFAGRID----FVAGNAEALPLPDGSFDAYTIAFGIRNVPRIERALA 154          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_BART1 (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=ubiE PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.517e-31
Identity = 78/164 (47.56%), Postives = 104/164 (63.41%), Query Frame = 2
Query:  212 SFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKH---LDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            SFGF  V   +K  +V +VF SVA+NYD MND++S GLHR+WK+ +V+ L+P P + H   LDVAGGTGD+AFRIL                   +++    V DIN +ML+VGK+RA + G     + +VE +AE L FED + D YTIAFGIRN  HI++AL
Sbjct:   17 SFGFTRVDETQKQSMVDSVFHSVAENYDKMNDILSLGLHRVWKNSMVAWLSP-PALSHWKVLDVAGGTGDIAFRILKA----------------SRQKAHATVLDINGSMLSVGKQRAQKNGLA-PLIDFVEANAEHLPFEDQSFDAYTIAFGIRNVPHIDQAL 162          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_SILST (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Silicibacter sp. (strain TM1040) GN=ubiE PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.769e-30
Identity = 77/162 (47.53%), Postives = 98/162 (60.49%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            T FGF+ VP  EK+  V  VF+SVA  YD+MND+MS G+HR+WKD ++  L P PG + LDVAGGTGD++FR L       +RA                V D+   ML  G+KRA E     + L WV GDA AL F+D+T D YTI+FGIRN T  ++AL
Sbjct:    9 THFGFETVPEHEKAGRVQGVFNSVASKYDIMNDVMSVGIHRIWKDAMMDWLAPRPGQRLLDVAGGTGDISFRFL-------KRA----------GHGHSTVLDLTTPMLEEGRKRA-EAEQMAECLDWVTGDAMALPFKDNTFDVYTISFGIRNVTRPQEAL 152          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_DINSH (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Dinoroseobacter shibae (strain DFL 12) GN=ubiE PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30
Identity = 77/163 (47.24%), Postives = 99/163 (60.74%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKALA 697
            T FG++ V  ++K+ LV  VF++VA  YD+MNDLMSGGLHR+WKD ++  L P    + LDVAGGTGD+AFR L       +RA           E    V D+  +ML  G++RA E    D  L W+ GDA AL F D++ D YTI+FGIRN T I  ALA
Sbjct:    9 THFGYQTVREDDKAGLVQGVFTNVASKYDIMNDLMSGGLHRVWKDAMMDWLAPRAAQRLLDVAGGTGDIAFRFL-------KRA----------PEAEAVVLDLTESMLIAGRQRA-EAEALDARLNWLVGDAMALPFADNSFDVYTISFGIRNVTRIPDALA 153          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_RHISN (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Rhizobium sp. (strain NGR234) GN=ubiE PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.723e-30
Identity = 81/164 (49.39%), Postives = 104/164 (63.41%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNP--FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            TSFGF++V   EK  LV++VF  VAK YD+MND+MS GLHR+WKD +++ LNP      + LDVAGGTGD+AFRI   V +  R+A   VL             DIN +ML VG +RA ++G    +L +VE +AE L F  ++ D YTIAFGIRN   IE AL
Sbjct:   14 TSFGFRDVGTGEKQPLVNDVFHKVAKRYDVMNDVMSAGLHRVWKDAMIAALNPPRRENYRVLDVAGGTGDIAFRI---VEASGRKAHATVL-------------DINGSMLAVGAERARKKGLLG-NLEFVEANAEDLPFAANSFDAYTIAFGIRNVPRIEVAL 160          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_ROSDO (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=ubiE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.169e-30
Identity = 79/162 (48.77%), Postives = 96/162 (59.26%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            T FGF+ VP  EK+  V  VFSSVA  YD+MND+MS G+HRLWK+ ++  L P  G K LDVAGGTGD++FR L      KR                  V D+  +ML  G+KRA      DQ L WV GDA AL F D+T D YTI+FGIRN T  ++AL
Sbjct:    9 THFGFETVPEGEKAGRVQGVFSSVASKYDIMNDVMSVGIHRLWKEAMMDWLAPRAGQKLLDVAGGTGDISFRFL------KRAGYGHAT-----------VLDLTESMLVEGRKRAEAAAMADQ-LDWVTGDAMALPFADNTFDVYTISFGIRNVTRPQEAL 152          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: COQ5_CAEEL (Ubiquinone biosynthesis methyltransferase coq-5, mitochondrial OS=Caenorhabditis elegans GN=coq-5 PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.052e-29
Identity = 79/163 (48.47%), Postives = 96/163 (58.90%), Query Frame = 2
Query:  209 TSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRA-LERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            T FGF +V   EK Q V +VF++VAK YDLMND MS G+HRLWKD  V  L      K LD+AGGTGD+AFRIL    + K                 + V DIN  ML+VGKKRA  ER  Q     WV  +AE + FE +T D +T++FGIRN TH EK +
Sbjct:   41 THFGFTDVDEAEKEQKVHHVFANVAKKYDLMNDAMSMGVHRLWKDYYVGGLQVPYNAKCLDMAGGTGDIAFRILRHSPTAK-----------------VTVSDINQPMLDVGKKRAEKERDIQPSRAEWVCANAEQMPFESNTYDLFTMSFGIRNCTHPEKVV 186          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: A41_LEIDO (Putative ubiquinone biosynthesis methyltransferase A41 OS=Leishmania donovani PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29
Identity = 72/147 (48.98%), Postives = 89/147 (60.54%), Query Frame = 2
Query:  257 VSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSK-LNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            V  VF SVA  YD+MND++S G+HR+WK   V   + P PG K LDVAGGTGD+AFRI D   SI+ R     +     + T++ VCDIN  ML  G+KRA   GY D  + WV    E L FED   D YT++FGIRN +   KAL
Sbjct:   18 VKKVFDSVATKYDMMNDVLSLGIHRIWKKHFVEDCVCPLPGSKFLDVAGGTGDIAFRITD---SIRARGQSFGIVPKTLDGTKVVVCDINAMMLKEGQKRAEREGYMD--IDWVCASGEELPFEDGAFDSYTVSFGIRNFSDRPKAL 159          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_CAUSK (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Caulobacter sp. (strain K31) GN=ubiE PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.222e-29
Identity = 74/164 (45.12%), Postives = 97/164 (59.15%), Query Frame = 2
Query:  206 ATSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSI-KRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            + +FGFK+V A  K+ LV  VF  VAKNYDLMND+MSGG+HRLWKD + ++LNP PG   +D AGGTGD+A R      +  +RR   D L         I + D N  M+  G    +E+G   + + W  GDA+ L   D+  D Y I+FGIRN T I+ AL
Sbjct:    5 SATFGFKDVDASAKAGLVRGVFDRVAKNYDLMNDVMSGGVHRLWKDAVAARLNPQPGEIIIDCAGGTGDMARRFAKMTRAAQERRGGPDAL---------INIIDYNAEMIGAG----IEKGGAPE-ITWTVGDAQRLPLPDAYADAYVISFGIRNVTDIDAAL 154          
BLAST of FC923352 vs. ExPASy Swiss-Prot
Match: UBIE_CAUCR (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Caulobacter crescentus GN=ubiE PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.222e-29
Identity = 73/163 (44.79%), Postives = 94/163 (57.67%), Query Frame = 2
Query:  206 ATSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDQSLLWVEGDAEALCFEDSTMDGYTIAFGIRNGTHIEKAL 694
            + SFGFK+V A  K+ LV  VF  VAKNYD+MNDLMSGG+HRLWKD + ++LNP PG   +D AGGTGD+A R        + R            +  I + D N  M+  G    +ERG + + + W  GDA+ L   D+  D Y I+FGIRN T I  AL
Sbjct:    5 SASFGFKDVDASLKAGLVRGVFDRVAKNYDIMNDLMSGGVHRLWKDAVAARLNPQPGEVIIDCAGGTGDMARRFAKMARKAQERR--------GGPDATINIVDYNAEMIMAG----IERGGEPE-ITWTVGDAQRLPLPDAYADAYVISFGIRNVTDINAAL 154          
The following BLAST results are available for this feature:
BLAST of FC923352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
UBIE_METNO9.517e-3149.40Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_BART19.517e-3147.56Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_SILST2.769e-3047.53Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_DINSH3.616e-3047.24Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_RHISN4.723e-3049.39Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_ROSDO6.169e-3048.77Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
COQ5_CAEEL1.052e-2948.47Ubiquinone biosynthesis methyltransferase coq-5, m... [more]
A41_LEIDO2.344e-2948.98Putative ubiquinone biosynthesis methyltransferase... [more]
UBIE_CAUSK5.222e-2945.12Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_CAUCR5.222e-2944.79Ubiquinone/menaquinone biosynthesis methyltransfer... [more]

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Properties
Property NameValue
Genbank descriptionC31704B04EF StrClemenN Citrus clementina cDNA clone C31704B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923352 ID=FC923352; Name=FC923352; organism=Citrus clementina; type=EST; length=698bp
GAAGAACGAGGGAGAGTTGGAGAAGCGAATATTATTAGAACAGAGAGTGT
ACAGTTTTATTGGGCGCCCGTTACTGTTTCAAGGTTTTCAGCATCGATTG
CATTGTTAGAAAGTTGTTGAAGCCATGGCAGTGCGGGTGGTGACGAGGAA
TTTGGGGAGTAGACTCTTACCGATGCTCTCTTCCACTTCTTTACTGCATT
CACATGCTACAAGCTTCGGGTTCAAAGAAGTACCGGCAGAAGAAAAAAGT
CAATTGGTTAGCAATGTTTTCAGCAGTGTTGCTAAAAATTATGATCTCAT
GAATGATTTGATGAGTGGTGGATTGCATAGATTGTGGAAGGATAGACTTG
TTTCCAAGTTGAATCCATTTCCGGGAATGAAGCACCTTGATGTTGCTGGT
GGAACAGGGGATGTTGCTTTCAGGATTTTAGACACTGTAAATAGCATCAA
ACGAAGAGCACTCCAGGATGTTCTTGAAGATGATTTACAGGAGGAAACTC
GGATATATGTTTGTGACATCAACCCAAACATGCTAAATGTTGGTAAAAAG
CGTGCTTTAGAGAGAGGTTACCAGGACCAATCACTTTTGTGGGTGGAAGG
AGATGCAGAAGCCTTGTGCTTTGAAGACAGTACTATGGATGGTTACACNA
TTGCCTTCGGAATTAGGAATGGTACTCATATTGAGAAGGCTCTAGCTG
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