FC923375

Overview
NameFC923375
Unique NameFC923375
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length463
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923375 vs. ExPASy Swiss-Prot
Match: CAPZB_DICDI (F-actin-capping protein subunit beta OS=Dictyostelium discoideum GN=acpA PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.141e-26
Identity = 52/112 (46.43%), Postives = 72/112 (64.29%), Query Frame = 3
Query:  126 DKKMEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEG 461
            +K++   + LMRR+PP   E                    +DQPL+V +D  S K+++LC+YNRDADSYRSPWSNKY PPL  A YP ++LR +E++ANE+F IY + Y+EG
Sbjct:    3 EKQLSCCLDLMRRLPPSQIEDNLAGLLDLVPDLTEDLLSSIDQPLKVAYDAVSKKDYLLCDYNRDADSYRSPWSNKYDPPLSGACYPSSKLRDIEVQANEIFEIYLNLYFEG 114          
BLAST of FC923375 vs. ExPASy Swiss-Prot
Match: CAPZB_ASPFU (F-actin-capping protein subunit beta OS=Aspergillus fumigatus GN=cap2 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.436e-22
Identity = 46/112 (41.07%), Postives = 70/112 (62.50%), Query Frame = 3
Query:  126 DKKMEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEG 461
            D + ++A+ L+RR+ P+ ++                    VDQPL++    ++ ++++LC+YNRD DSYRSPWSN++ PPLED   P   +RKLE+ ANE F +YR+ YYEG
Sbjct:   40 DIQFDSALDLLRRLNPRDTKQNLQAITSIVPDLTEDLLSSVDQPLEIRRCPKTNRDYLLCDYNRDGDSYRSPWSNEFDPPLEDGTVPSERVRKLEVAANEAFDVYRELYYEG 151          
BLAST of FC923375 vs. ExPASy Swiss-Prot
Match: CAPZB_SCHPO (F-actin-capping protein subunit beta OS=Schizosaccharomyces pombe GN=acp2 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22
Identity = 50/108 (46.30%), Postives = 63/108 (58.33%), Query Frame = 3
Query:  138 EAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEG 461
            +AA+ L+RR+ PK                       VDQPL+V    ESG +++LC++NRD DSYRSPWSNKY PPLED L     +RKLE+  NE   +Y D YYEG
Sbjct:    5 DAALDLLRRLNPKDISKNLDTILSVAPDLADVLLSSVDQPLKVNTCSESGNQYLLCDFNRDGDSYRSPWSNKYDPPLEDGLVSTDRVRKLEVSLNEAIRVYLDLYYEG 112          
BLAST of FC923375 vs. ExPASy Swiss-Prot
Match: CAPZB_ASPOR (F-actin-capping protein subunit beta OS=Aspergillus oryzae GN=cap2 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22
Identity = 45/112 (40.18%), Postives = 70/112 (62.50%), Query Frame = 3
Query:  126 DKKMEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEG 461
            D + ++A+ L+RR+ P+ ++                    VDQPL++    ++ ++++LC+YNRD DSYRSPWSN++ PPL+D   P   +RKLE+ ANE F +YR+ YYEG
Sbjct:    3 DAQFDSALDLLRRLNPRDTKKNLQAITSIVPDLTEDLLSSVDQPLEIRRCSKTKRDYLLCDYNRDGDSYRSPWSNEFDPPLDDGTVPSERVRKLEVAANEAFDVYRELYYEG 114          
BLAST of FC923375 vs. ExPASy Swiss-Prot
Match: CAPZB_EMENI (F-actin-capping protein subunit beta OS=Emericella nidulans GN=cap2 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 7.129e-22
Identity = 44/112 (39.29%), Postives = 70/112 (62.50%), Query Frame = 3
Query:  126 DKKMEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEG 461
            D + ++A+ L+RR+ P+ ++                    VDQPL++    ++ ++++LC+YNRD DSYRSPWSN++ PPL+D   P   +R+LE+ ANE F +YR+ YYEG
Sbjct:    3 DAQFDSALDLLRRLNPRDTKQNLQAITSIVPDLTEDLLSSVDQPLEIRRCPKTKRDYLLCDYNRDGDSYRSPWSNEFDPPLDDGTVPSERVRRLEVAANEAFDVYRELYYEG 114          
BLAST of FC923375 vs. ExPASy Swiss-Prot
Match: CAPZB_GIBZE (F-actin-capping protein subunit beta OS=Gibberella zeae GN=CAP2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.912e-20
Identity = 47/124 (37.90%), Postives = 70/124 (56.45%), Query Frame = 3
Query:  138 EAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDA----------------LYPPAELRKLEIEANEVFAIYRDQYYEG 461
            ++A+ L+RR+ PK +                     VDQPL V   +++G++++LC+YNRD DSYRSPWSN++ PPL++A                  P   +RK+E++ANE F +YRD YYEG
Sbjct:    7 DSALDLLRRLNPKQTTDHLNAIISIAPDLTEDLLSSVDQPLTVRRCKQTGRDYLLCDYNRDGDSYRSPWSNQFDPPLDEAGSGGVGAGGNEGAGEGAIPSERVRKMEVKANEAFDVYRDLYYEG 130          
BLAST of FC923375 vs. ExPASy Swiss-Prot
Match: CAPZB_NEUCR (F-actin-capping protein subunit beta OS=Neurospora crassa GN=cap-2 PE=3 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 5.109e-20
Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 3
Query:  138 EAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLE---------------------DALYPPAELRKLEIEANEVFAIYRDQYYEG 461
            ++A+ L+RR+ PKH+                     VDQPL V   +++G++++LC+YNRD DSYRSPWSN++ PPLE                      ++ P   +RK+EI+ANE F +YR+ YYEG
Sbjct:    8 DSALDLLRRLNPKHTAEHLNNLITLAPDLTEDLLSSVDQPLTVKRCKQTGRDYLLCDYNRDGDSYRSPWSNQFDPPLEGGNQGGSGGDGEGDGGEGGAAGSIMPGERVRKMEIKANEAFDVYRELYYEG 136          
BLAST of FC923375 vs. ExPASy Swiss-Prot
Match: CAPZB_YARLI (F-actin-capping protein subunit beta OS=Yarrowia lipolytica GN=CAP2 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.941e-19
Identity = 49/112 (43.75%), Postives = 64/112 (57.14%), Query Frame = 3
Query:  126 DKKMEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEG 461
            D++ +AA+ L+RR+ PK+                      VDQPL V   + + KE++ C+YNRD DS+RSPWS  Y  P  D   P A LRKLE+ AN+ F IYRD YYEG
Sbjct:    3 DEQYDAALSLLRRLDPKNVSVNLNSLCKIAPELAEDLLSSVDQPLGVKTCKSTKKEYLTCDYNRDGDSFRSPWSGDYE-PATDGPTPSAALRKLEVLANDSFDIYRDLYYEG 113          
BLAST of FC923375 vs. ExPASy Swiss-Prot
Match: CAPZB_CANGA (F-actin-capping protein subunit beta OS=Candida glabrata GN=CAP2 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.535e-19
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  126 DKKMEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFD-EESGKEFILCEYNRDADSYRSPWSNKYHP-----PLEDALYPPAELRKLEIEANEVFAIYRDQYYEG 461
            D+K +AA+ L+RR+ P +                      +D PL+V  D ++SG+ F+ C+YNRD DSYRSPWSN+Y P      L+++ +P   LR LE+ AN+ F +YRD YYEG
Sbjct:    2 DEKYDAALDLLRRLNPNNLTENLQRIIGLEPELAEDLLSSIDVPLKVQQDSKQSGRPFLCCDYNRDVDSYRSPWSNEYFPELSAEDLQESPFPSESLRSLEVLANDSFDVYRDLYYEG 119          
BLAST of FC923375 vs. ExPASy Swiss-Prot
Match: CAPZB_DEBHA (F-actin-capping protein subunit beta OS=Debaryomyces hansenii GN=CAP2 PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 4.325e-19
Identity = 53/126 (42.06%), Postives = 71/126 (56.35%), Query Frame = 3
Query:  126 DKKMEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQ--------VDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPL---EDALYPPAE---LRKLEIEANEVFAIYRDQYYEG 461
            D K++A++ LMRR+ PK+                     +        VD PL+    +E+GKE++ C+YNRD DSYRSPWSNKY P +    D L PP     LR+LE++AN+ F IYRD YYEG
Sbjct:    5 DDKLDASLDLMRRLDPKNITKNLNDICTLIQNDGSETSEELTQDLLSSVDVPLRTQKCDETGKEYLCCDYNRDGDSYRSPWSNKYFPVVAQDSDELPPPFPSNILRELEVKANDSFDIYRDLYYEG 130          
The following BLAST results are available for this feature:
BLAST of FC923375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
CAPZB_DICDI2.141e-2646.43F-actin-capping protein subunit beta OS=Dictyostel... [more]
CAPZB_ASPFU1.436e-2241.07F-actin-capping protein subunit beta OS=Aspergillu... [more]
CAPZB_SCHPO2.450e-2246.30F-actin-capping protein subunit beta OS=Schizosacc... [more]
CAPZB_ASPOR2.450e-2240.18F-actin-capping protein subunit beta OS=Aspergillu... [more]
CAPZB_EMENI7.129e-2239.29F-actin-capping protein subunit beta OS=Emericella... [more]
CAPZB_GIBZE3.912e-2037.90F-actin-capping protein subunit beta OS=Gibberella... [more]
CAPZB_NEUCR5.109e-2037.21F-actin-capping protein subunit beta OS=Neurospora... [more]
CAPZB_YARLI1.941e-1943.75F-actin-capping protein subunit beta OS=Yarrowia l... [more]
CAPZB_CANGA2.535e-1940.68F-actin-capping protein subunit beta OS=Candida gl... [more]
CAPZB_DEBHA4.325e-1942.06F-actin-capping protein subunit beta OS=Debaryomyc... [more]

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Properties
Property NameValue
Genbank descriptionC31704D03EF StrClemenN Citrus clementina cDNA clone C31704D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923375 ID=FC923375; Name=FC923375; organism=Citrus clementina; type=EST; length=463bp
GGGATCAAAACGAGAAGGGTGAGCGCCTCTTCTGGTCATTTTGTTTTGTT
GCTTTCCTGCGCTTGCTTTGTGTCGAATATACAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGATAAGAAAATGGAGGCAGCAATGG
GATTGATGAGAAGAATGCCGCCGAAGCACTCGGAAACAGCACTGTCTGCA
CTTCTCAGCCTCTTGCCTGATCACTCCTCCGATCTCCTCTCTCAAGTCGA
TCAGCCTCTCCAGGTTTTATTTGATGAGGAGAGCGGGAAAGAGTTCATTT
TGTGTGAATACAACAGAGATGCTGATTCTTATAGGTCTCCTTGGTCAAAT
AAGTACCATCCGCCATTGGAAGATGCACTGTACCCTCCTGCAGAGTTAAG
GAAGCTTGAAATTGAAGCGAATGAAGTGTTTGCAATTTATCGTGACCAGT
ATTATGAAGGTGG
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