FC923377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_PHOLE (Superoxide dismutase [Fe] OS=Photobacterium leiognathi GN=sodB PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.151e-22 Identity = 54/131 (41.22%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 F+L P+ +NALEPH+S++TLE+H+GKHH YV LN + GTEL + KSLE+++ S FNNAAQ WNH F+W IE+ FGS FGS W WLV Sbjct: 2 FELPALPFAMNALEPHISQETLEYHYGKHHNTYVVKLNGLVEGTELAE-KSLEEIIKTSTG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGEVAAAIEKAFGSFAEFKAKFTDSAINNFGSSWTWLV 126
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.115e-22 Identity = 54/133 (40.60%), Postives = 69/133 (51.88%), Query Frame = 1 Query: 196 VKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 + ++L P+ AL P+++K+TLEFH KHH AYV+N N + T+L DG+ +E V+ A FNNAAQAWNH F+W I DFGS TQFGSGWAWLV Sbjct: 1 MSYELPALPFDYTALAPYITKETLEFHHDKHHAAYVNNYNNAVKDTDL-DGQPIEAVIKAIAGDASKAGLFNNAAQAWNHSFYWNSIKPNGGGAPTGALADKIAADFGSFENFVTEFKQAAATQFGSGWAWLV 132
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_PSEPK (Superoxide dismutase [Fe] OS=Pseudomonas putida (strain KT2440) GN=sodB PE=3 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 4.115e-22 Identity = 57/133 (42.86%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 600 F+L P PY +AL+PH+SK+TLE+H KHH YV NLN + GTE +GK+LE++V +S G + FNNAAQ WNH F+W I FGS FGSGW WLV K Sbjct: 3 FELPPLPYAHDALQPHISKETLEYHHDKHHNTYVVNLNNLVPGTEF-EGKTLEEIVKSS--SGGI---FNNAAQVWNHTFYWNCLSPNGGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKK 129
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_SALTY (Superoxide dismutase [Fe] OS=Salmonella typhimurium GN=sodB PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 9.167e-22 Identity = 56/133 (42.11%), Postives = 70/133 (52.63%), Query Frame = 1 Query: 196 VKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 + F+L PY +AL PH+S +TLE+H+GKHH+ YV NLN I GT +GKSLE++V S +G + FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 1 MSFELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIVRTS--EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAIKNFGSGWTWLV 127
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_SALTI (Superoxide dismutase [Fe] OS=Salmonella typhi GN=sodB PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 9.167e-22 Identity = 56/133 (42.11%), Postives = 70/133 (52.63%), Query Frame = 1 Query: 196 VKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 + F+L PY +AL PH+S +TLE+H+GKHH+ YV NLN I GT +GKSLE++V S +G + FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 1 MSFELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIVRTS--EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAIKNFGSGWTWLV 127
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_SHIFL (Superoxide dismutase [Fe] OS=Shigella flexneri GN=sodB PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.042e-21 Identity = 53/133 (39.85%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 196 VKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 + F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 1 MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSSEG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV 127
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_ECOLI (Superoxide dismutase [Fe] OS=Escherichia coli (strain K12) GN=sodB PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.042e-21 Identity = 53/133 (39.85%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 196 VKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 + F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 1 MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSSEG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV 127
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_ECOL6 (Superoxide dismutase [Fe] OS=Escherichia coli O6 GN=sodB PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.042e-21 Identity = 53/133 (39.85%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 196 VKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 + F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 1 MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSSEG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV 127
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_ECO57 (Superoxide dismutase [Fe] OS=Escherichia coli O157:H7 GN=sodB PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.042e-21 Identity = 53/133 (39.85%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 196 VKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 + F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 1 MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSSEG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV 127
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_BORPE (Superoxide dismutase [Fe] OS=Bordetella pertussis GN=sodB PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.483e-21 Identity = 56/131 (42.75%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 208 LKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 600 L P PY L+AL P +SK+TLEFH+GKHH+ YV NLN I GTE + SLE++V S FNNAAQ WNH F+W I+ +GS FGSGW WLV K Sbjct: 5 LPPLPYALDALAPRISKETLEFHYGKHHQTYVTNLNNLIPGTEF-ENLSLEEIVKKSSG-----GVFNNAAQVWNHTFYWNSLSPNGGGEPSGALADAIKAKWGSVDAFKEAFNKSAAGNFGSGWTWLVKK 129 The following BLAST results are available for this feature:
BLAST of FC923377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923377 ID=FC923377; Name=FC923377; organism=Citrus clementina; type=EST; length=647bpback to top |