FC923377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_RICBR (Superoxide dismutase [Mn/Fe] OS=Rickettsia bellii (strain RML369-C) GN=sodB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.014e-20 Identity = 53/135 (39.26%), Postives = 66/135 (48.89%), Query Frame = 1 Query: 193 SVKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 597 S F L PY + +PH + +T E+H GKHH AYV NLN + E K+LE+++ S ++ + FNNAAQ WNH FFW I DFGS QFGSGWAWLVY Sbjct: 11 SYPFVLPNLPYEKESFKPHFTAETFEYHHGKHHNAYVQNLNNLLKDKEELQKKNLEEIIDWS-SQNQNIAIFNNAAQVWNHTFFWHSIKPNGGGKPSGKILKQINEDFGSFEEFCEQFKAEATGQFGSGWAWLVY 144
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_PSEHT (Superoxide dismutase [Fe] OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=sodB PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.729e-20 Identity = 54/131 (41.22%), Postives = 66/131 (50.38%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 F+L PY ++ALEPH+SK+TLEFH GKHH YV LN I GT+ + KSLE++V +S FNNAAQ WNH F+W I +GS FGS W WLV Sbjct: 2 FELPSLPYAIDALEPHISKETLEFHHGKHHNTYVVKLNGLIPGTKF-ENKSLEEIVCSSDG-----GVFNNAAQIWNHTFYWNSLSPNGGGAPTGAVADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLV 126
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_RICFE (Superoxide dismutase [Mn/Fe] OS=Rickettsia felis GN=sodB PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.949e-20 Identity = 52/135 (38.52%), Postives = 65/135 (48.15%), Query Frame = 1 Query: 193 SVKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 597 S F L PY + +PH + +T ++H GKHH AYV NLN + E K LE+++ S ++ FNNAAQ WNH FFW I +DFGS QFGSGWAWLVY Sbjct: 11 SYPFILPDLPYDKESFKPHFTPETFDYHHGKHHNAYVQNLNNLLKDKEELQKKDLEEIIEWS-SQNSNAAIFNNAAQIWNHSFFWHSIKPQGGGKPSGKILEQINKDFGSFEGFCEQFKQEAVGQFGSGWAWLVY 144
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_RICCN (Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii GN=sodB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.911e-19 Identity = 50/135 (37.04%), Postives = 64/135 (47.41%), Query Frame = 1 Query: 193 SVKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 597 S F L PY + +PH + +T ++H GKHH YV NLN + E K LE+++ S ++ FNNAAQ WNH FFW I +DFGS QFGSGWAWL+Y Sbjct: 11 SYPFILPDLPYEKESFKPHFTLETFDYHHGKHHNTYVQNLNNLLKDKEELQKKDLEEIIEWS-SQNSNAAIFNNAAQIWNHTFFWHSIKPQGGGKPSGKILEQINKDFGSFEEFCEQFKQEAVGQFGSGWAWLIY 144
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_BABBO (Superoxide dismutase [Fe] OS=Babesia bovis GN=SODB PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.260e-19 Identity = 51/133 (38.35%), Postives = 65/133 (48.87%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 600 F L PY + L PH+S++TL FH+GKHH YV+ LN I GT L + ++E++++ G FNNAAQ WNH F+W IE FGS FGSGW WLV K Sbjct: 3 FKLPALPYGMRELIPHISEETLSFHYGKHHAGYVNKLNSLIKGTPL-ESCTIEELIL-----GQTGAVFNNAAQIWNHTFYWNSMGPNCGGEPTGPIRKKIEEKFGSFSAFKTDFSNLLAGHFGSGWGWLVLK 129
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_RHOCA (Superoxide dismutase [Fe] OS=Rhodobacter capsulatus GN=sodB PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.561e-19 Identity = 56/134 (41.79%), Postives = 70/134 (52.24%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEP-HMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA--FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 F+L PY +AL MSK+TLE+H HH+AYVDN NK I GTE +GKS+E++V +Y G + + FNNA+Q WNH FW + FGS QFGSGWAWLV Sbjct: 3 FELPALPYAHDALASLGMSKETLEYHHDLHHKAYVDNGNKLIAGTE-WEGKSVEEIVKGTYCAGAVAQSGIFNNASQHWNHAQFWEMMGPGEDKKMPGALEKALVESFGSVAKFKEDFAAAGAGQFGSGWAWLV 135
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_RICTY (Superoxide dismutase [Mn/Fe] OS=Rickettsia typhi GN=sodB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.263e-19 Identity = 49/141 (34.75%), Postives = 66/141 (46.81%), Query Frame = 1 Query: 175 KTGGRISVKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 597 + + S F L PY + +PH + +T ++H GKHH +YV NLN + E K LE ++ S +K + FNNA+Q WNH FFW I +DFGS QFGSGW W+VY Sbjct: 5 RKANQTSYPFILPDLPYAKESFKPHFTCETFDYHHGKHHNSYVQNLNNLLKDREELQKKDLEGIIKWS-SKNSEVTVFNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISQDFGSFEQFCEQFKQEALGQFGSGWVWVVY 144
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_RICPR (Superoxide dismutase [Mn/Fe] OS=Rickettsia prowazekii GN=sodB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.263e-19 Identity = 48/135 (35.56%), Postives = 64/135 (47.41%), Query Frame = 1 Query: 193 SVKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 597 S F L PY + +PH +++T ++H GKHH +YV NLN I E K LE+++ S + + NNA+Q WNH FFW I +DFGS QFGSGW W+VY Sbjct: 11 SYPFILPDLPYDKESFKPHFTRETFDYHHGKHHNSYVQNLNNLIKDREELQKKDLEEIIEWSSQNAE-VAILNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISKDFGSFEQFCAQFKQEAVGQFGSGWTWVVY 144
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_PLAVI (Superoxide dismutase [Fe] OS=Plasmodium vivax GN=SODB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.708e-18 Identity = 50/123 (40.65%), Postives = 59/123 (47.97%), Query Frame = 1 Query: 223 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 591 Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----AIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWL 126
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_PLAMA (Superoxide dismutase [Fe] OS=Plasmodium malariae GN=SODB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.708e-18 Identity = 50/123 (40.65%), Postives = 59/123 (47.97%), Query Frame = 1 Query: 223 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 591 Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----AIFNNAAQIWNHTFYWDSMGPDCGGEPHGGIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWL 126 The following BLAST results are available for this feature:
BLAST of FC923377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923377 ID=FC923377; Name=FC923377; organism=Citrus clementina; type=EST; length=647bpback to top |