FC923377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_PLAFX (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate HB3) GN=SODB PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.708e-18 Identity = 50/123 (40.65%), Postives = 59/123 (47.97%), Query Frame = 1 Query: 223 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 591 Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----AIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWL 126
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_PLAFA (Superoxide dismutase [Fe] OS=Plasmodium falciparum GN=SODB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.708e-18 Identity = 50/123 (40.65%), Postives = 59/123 (47.97%), Query Frame = 1 Query: 223 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 591 Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----AIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWL 126
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_PLAF7 (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate 3D7) GN=SODB PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.708e-18 Identity = 50/123 (40.65%), Postives = 59/123 (47.97%), Query Frame = 1 Query: 223 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 591 Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----AIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWL 126
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_ENTHI (Superoxide dismutase [Fe] OS=Entamoeba histolytica GN=SODB PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.708e-18 Identity = 52/133 (39.10%), Postives = 65/133 (48.87%), Query Frame = 1 Query: 196 VKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 + F L PY NALEPH+SK+TLEFH KHH YV+ LN + GTE + K+LE+++ + +NNAAQAWNH F+W L FG FGSGW WLV Sbjct: 1 MSFQLPQLPYAYNALEPHISKETLEFHHDKHHATYVNKLNGLVKGTE-QEHKTLEELI----KQKPTQAIYNNAAQAWNHAFYWKCMCGCGVKPSEQLIAKLTAA-FGGLEEFKKKFTEKAVGHFGSGWCWLV 127
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_RHIME (Superoxide dismutase [Mn] OS=Rhizobium meliloti GN=sodB PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 1.160e-16 Identity = 55/134 (41.04%), Postives = 64/134 (47.76%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFW-XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 600 F+L PY +AL P+MS++TLE+H KHH AYV N NK L D SLED+V SY G P FNNA Q +NH FW I+ D G QFGSGWAWL K Sbjct: 3 FELPNLPYDYDALAPYMSRETLEYHHDKHHLAYVTNGNKLAEEAGLSD-LSLEDIVKKSY--GTNQPLFNNAGQHYNHVHFWKWMKKGGGGTSLPGKLDAAIKSDLGGYDKFRADFSAAGAGQFGSGWAWLSVK 133
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_PORGI (Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis GN=sodB PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 7.516e-16 Identity = 48/124 (38.71%), Postives = 64/124 (51.61%), Query Frame = 1 Query: 220 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 591 PY ++AL P +SK+T+EFH GKH + YVDNLNK I+GTE + L +V S +G + FNNA Q NH+ ++ I++ FGS T FGSGW WL Sbjct: 9 PYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGTEF-ENADLNTIVQKS--EGGI---FNNAGQTLNHNLYFTQFRPGKGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWL 126
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_BACFR (Superoxide dismutase [Fe] OS=Bacteroides fragilis GN=sodB PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.856e-15 Identity = 49/131 (37.40%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHD-FFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 591 +++ PY NALEP +S+ T+++H+GKH + YV+NLN + GTE +GK++E ++AS G + FNNA Q NH +F I+RDFGS FGSGWAWL Sbjct: 3 YEMPKLPYANNALEPVISQQTIDYHYGKHLQTYVNNLNSLVPGTEY-EGKTVE-AIVASAPDGAI---FNNAGQVLNHTLYFLQFAPKPAKNEPAGKLGEAIKRDFGSFENFKKEFNAASVGLFGSGWAWL 128
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_ACIAD (Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1) GN=sodA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.872e-15 Identity = 50/138 (36.23%), Postives = 63/138 (45.65%), Query Frame = 1 Query: 199 KFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDV--VIASYNKGDLLPAFNNAAQAWNHDFFW-XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKP 603 +F P PY NAL+P + + T+E H+GKHH+AYVDNLN QI D L + I+ YN NN +NH FFW I +DFGS +FGSGWAWL+ P Sbjct: 24 EFKQAPLPYATNALQPAIDQQTMEIHYGKHHKAYVDNLNAQIKTYPELDKTDLIQLQKQISKYNTA----VRNNGGGHFNHTFFWESLAATNKTGQPSPALVKQITQDFGSLDAFKQKFNEAASGRFGSGWAWLIVTP 157
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_CAMJJ (Superoxide dismutase [Fe] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=sodB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.872e-15 Identity = 50/139 (35.97%), Postives = 64/139 (46.04%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL-------IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 597 F+L+ PY NA +S +T +H GKHH YV NLN I TE GK L ++ S N G FNNAAQ +NHDF++ + +E++FGS FGSGW WLVY Sbjct: 2 FELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKDTEFA-GKDLVSIIKTS-NGG----VFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVY 134
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_CAMJE (Superoxide dismutase [Fe] OS=Campylobacter jejuni GN=sodB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.872e-15 Identity = 50/139 (35.97%), Postives = 64/139 (46.04%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL-------IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 597 F+L+ PY NA +S +T +H GKHH YV NLN I TE GK L ++ S N G FNNAAQ +NHDF++ + +E++FGS FGSGW WLVY Sbjct: 2 FELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKDTEFA-GKDLVSIIKTS-NGG----VFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVY 134 The following BLAST results are available for this feature:
BLAST of FC923377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923377 ID=FC923377; Name=FC923377; organism=Citrus clementina; type=EST; length=647bpback to top |