FC923377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_STAS1 (Superoxide dismutase [Mn/Fe] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sodA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.035e-14 Identity = 46/133 (34.59%), Postives = 61/133 (45.86%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 F+L PY +ALEPH+ K T+E H KHH YV LN + GT+L + KS+E++V + S + NN NH FW I+ +GS +FGSGWAWLV Sbjct: 3 FELPNLPYGFDALEPHIDKQTMEIHHDKHHNTYVTKLNAAVEGTDL-ESKSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKGTVVDK--IKEQWGSLDAFKEEFADKAAARFGSGWAWLV 132
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_STAHJ (Superoxide dismutase [Mn/Fe] OS=Staphylococcus haemolyticus (strain JCSC1435) GN=sodA PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.035e-14 Identity = 46/133 (34.59%), Postives = 61/133 (45.86%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 F+L PY +ALEPH+ K T+E H KHH YV LN + GT+L + KS+E++V + S + NN NH FW I+ +GS +FGSGWAWLV Sbjct: 3 FELPNLPYATDALEPHIDKQTMEIHHDKHHNTYVTKLNSAVEGTDL-ESKSIEEIVANLDSVPEDIQTAVRNNGGGHLNHSLFWELLTPNSEEKGTVVDK--IKEQWGSLDEFKKEFADKAAARFGSGWAWLV 132
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_STAES (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=sodA PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.035e-14 Identity = 46/133 (34.59%), Postives = 60/133 (45.11%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 F+L PY +ALEPH+ K T+E H KHH YV LN + GT+L + KS+E++V + S NN NH FW I+ +GS +FGSGWAWLV Sbjct: 3 FELPNLPYAYDALEPHIDKQTMEIHHDKHHNTYVTKLNSAVEGTDL-EAKSIEEIVANLDSVPSNIQTAVRNNGGGHLNHSLFWELLSPNSEEKGEVVDK--IKEQWGSLDEFKKEFADKAAARFGSGWAWLV 132
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_STAEQ (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=sodA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.035e-14 Identity = 46/133 (34.59%), Postives = 60/133 (45.11%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 F+L PY +ALEPH+ K T+E H KHH YV LN + GT+L + KS+E++V + S NN NH FW I+ +GS +FGSGWAWLV Sbjct: 3 FELPNLPYAYDALEPHIDKQTMEIHHDKHHNTYVTKLNSAVEGTDL-EAKSIEEIVANLDSVPSNIQTAVRNNGGGHLNHSLFWELLSPNSEEKGEVVDK--IKEQWGSLDEFKKEFADKAAARFGSGWAWLV 132
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_STACA (Superoxide dismutase [Mn/Fe] OS=Staphylococcus carnosus GN=sodA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.035e-14 Identity = 47/133 (35.34%), Postives = 62/133 (46.62%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 F+L PY +ALEP++ K+T+E H KHH YV LN I GT+L + KS+E++V + S NN NH FW I+ ++GS QFGSGWAWLV Sbjct: 3 FELPNLPYEFDALEPYIDKETMEIHHDKHHNTYVTKLNAAIEGTDL-ENKSIEEIVANLDSVPSDIQTAVRNNGGGHLNHSLFWQLLTPNSEEKGTVIDK--IKEEWGSLDKFKDEFAKKAAGQFGSGWAWLV 132
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_CAMCO (Superoxide dismutase [Fe] OS=Campylobacter coli GN=sodB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.035e-14 Identity = 47/139 (33.81%), Postives = 62/139 (44.60%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL-------IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVY 597 F+L+ PY NA +S +T +H GKHH YV NLN I TE K L ++ +S FNNAAQ +NHDF++ + +E++FGS FGSGW WLVY Sbjct: 2 FELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKYTEFA-SKDLVSIIKSSSG-----GVFNNAAQVYNHDFYFDCIKPITGCGCGGSCQSMDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVY 134
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_SALTY (Superoxide dismutase [Mn] OS=Salmonella typhimurium GN=sodA PE=3 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 9.188e-14 Identity = 49/141 (34.75%), Postives = 62/141 (43.97%), Query Frame = 1 Query: 196 VKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 600 + + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D +PA NNA NH FW IERDFGS T+FGSGWAWLV K Sbjct: 1 MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALENLPEFASLPVEELI----TKLDQVPADKKTVLRNNAGGHANHSLFW--KGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLK 135
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_SHIFL (Superoxide dismutase [Mn] OS=Shigella flexneri GN=sodA PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13 Identity = 49/141 (34.75%), Postives = 62/141 (43.97%), Query Frame = 1 Query: 196 VKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 600 + + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D LPA NNA NH FW IERDFGS ++FGSGWAWLV K Sbjct: 1 MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELI----TKLDQLPADKKTVLRNNAGGHANHSLFW--KGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLK 135
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_SALTI (Superoxide dismutase [Mn] OS=Salmonella typhi GN=sodA PE=3 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13 Identity = 49/141 (34.75%), Postives = 62/141 (43.97%), Query Frame = 1 Query: 196 VKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 600 + + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D +PA NNA NH FW IERDFGS T+FGSGWAWLV K Sbjct: 1 MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALENLPEFADLPVEELI----TKLDQVPADKKTVLRNNAGGHANHSLFW--KGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLK 135
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_ECOLI (Superoxide dismutase [Mn] OS=Escherichia coli (strain K12) GN=sodA PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13 Identity = 49/141 (34.75%), Postives = 62/141 (43.97%), Query Frame = 1 Query: 196 VKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 600 + + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D LPA NNA NH FW IERDFGS ++FGSGWAWLV K Sbjct: 1 MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELI----TKLDQLPADKKTVLRNNAGGHANHSLFW--KGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLK 135 The following BLAST results are available for this feature:
BLAST of FC923377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923377 ID=FC923377; Name=FC923377; organism=Citrus clementina; type=EST; length=647bpback to top |