FC923377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM1_STAA3 (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain USA300) GN=sodA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13 Identity = 45/133 (33.83%), Postives = 60/133 (45.11%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 F+L PY +ALEPH K+T+E H +HH YV LN + GT+L + KS+E++V + S NN NH FW I+ +GS +FGSGWAWLV Sbjct: 3 FELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDL-ESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK--IKEQWGSLEEFKKEFADKAAARFGSGWAWLV 132
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_YEREN (Superoxide dismutase [Mn] OS=Yersinia enterocolitica GN=sodA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.567e-13 Identity = 50/141 (35.46%), Postives = 62/141 (43.97%), Query Frame = 1 Query: 196 VKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 600 + + L PY +ALEPH K T+E H KHH+ YV+N N + S+ED++ D +PA NNA NH FW IERDFGS T+FGSGWAWLV K Sbjct: 1 MSYSLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANTVLESFPELAKFSVEDLI----KDLDKVPAEKRTFMRNNAGGHANHSLFW--KGLKLGTTLTGDLKAAIERDFGSVDSFKEKFEAAAATRFGSGWAWLVLK 135
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.047e-13 Identity = 50/142 (35.21%), Postives = 62/142 (43.66%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV-----IASYNKGDLLPAFNNAAQAWNHDFFW----XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYK 600 + L PY +ALEPH+ T+E H KHH+ YVDN NK + GTE D +E ++ + + KG L NNA NH FW I FGS T+FGSGWAWLV K Sbjct: 3 YTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFAD-LPVEQLIQQLDRVPADKKGALR---NNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVK 140
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_PSEAE (Superoxide dismutase [Mn] OS=Pseudomonas aeruginosa GN=sodA PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.491e-13 Identity = 43/134 (32.09%), Postives = 58/134 (43.28%), Query Frame = 1 Query: 208 LKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKP 603 L P PY +ALEPH+ T+E H KHH+ YV+NLN + GT + + +E ++ +A + P NN NH FW I+ G T+FGSGWAWL P Sbjct: 5 LPPLPYAYDALEPHIDALTMEIHHSKHHQTYVNNLNAALEGTPYAE-QPVESLLRQLAGLPEKLRTPVVNNGGGHANHSLFWTVMSPQGGGRPDGDLGRAIDEQLGGFEAFKDAFTKAALTRFGSGWAWLSVTP 137
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_HAEIN (Superoxide dismutase [Mn] OS=Haemophilus influenzae GN=sodA PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.560e-13 Identity = 48/130 (36.92%), Postives = 59/130 (45.38%), Query Frame = 1 Query: 223 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-----TELGDGKSLEDV-VIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 Y NALEPH T+E H KHH+AYV+N N + G E+ G + ++ I + +G L NNA NH FW IERDFGS T+FGSGWAWLV Sbjct: 10 YAYNALEPHFDAQTMEIHHSKHHQAYVNNANAALEGLPAELVEMYPGHLISNLDKIPAEKRGALR---NNAGGHTNHSLFW--KSLKKGTTLQGALKDAIERDFGSVDAFKAEFEKAAATRFGSGWAWLV 134
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM2_PLEBO (Superoxide dismutase [Mn] 2 OS=Plectonema boryanum GN=sodA2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.560e-13 Identity = 45/133 (33.83%), Postives = 57/133 (42.86%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 F+LKP PY +ALEP++ T++ H KHH AYV+NLN I S+ED+V + + NNA NH FW I FGS +FGSGW WLV Sbjct: 3 FELKPLPYAYDALEPYIDATTMQLHHDKHHAAYVNNLNAAIEKYSDLQSMSVEDLVTHLDRVPEDVRTTVRNNAGGHVNHTMFWEIMGANGSGAPTGAISEAINNSFGSFDAFKQQFNDAGTKRFGSGWVWLV 135
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_XANCP (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris GN=sodA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.778e-13 Identity = 42/136 (30.88%), Postives = 61/136 (44.85%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKP 603 + L PY +ALEP++ T+E H KHH+ Y++N+N + GTE D +E++V + S + P NN NH FW I++D G ++FGSGWAWL P Sbjct: 3 YTLPQLPYAYDALEPNIDAQTMEIHHTKHHQTYINNVNAALEGTEYAD-LPVEELVSKLKSLPENLQGPVRNNGGGHANHSLFWTVMSPNGGGEPKGEVAKAIDKDIGGFEKFKEAFTKAALSRFGSGWAWLSVTP 137
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_XANC8 (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=sodA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.778e-13 Identity = 42/136 (30.88%), Postives = 61/136 (44.85%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKP 603 + L PY +ALEP++ T+E H KHH+ Y++N+N + GTE D +E++V + S + P NN NH FW I++D G ++FGSGWAWL P Sbjct: 3 YTLPQLPYAYDALEPNIDAQTMEIHHTKHHQTYINNVNAALEGTEYAD-LPVEELVSKLKSLPENLQGPVRNNGGGHANHSLFWTVMSPNGGGEPKGEVAKAIDKDIGGFEKFKEAFTKAALSRFGSGWAWLSVTP 137
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODM_LISMO (Superoxide dismutase [Mn] OS=Listeria monocytogenes GN=sodA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.733e-12 Identity = 42/133 (31.58%), Postives = 59/133 (44.36%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 594 ++L PY +ALEP+ K+T+E H+ KHH YV LN+ + G KS E++V + S + N+ NH FW IE +FG+ +FGSGWAWLV Sbjct: 3 YELPKLPYTYDALEPNFDKETMEIHYTKHHNTYVTKLNEAVAGHPELASKSAEELVTNLDSVPEDIRGAVRNHGGGHANHTLFWSILSPNGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLV 135
BLAST of FC923377 vs. ExPASy Swiss-Prot
Match: SODF_METJ (Superoxide dismutase [Mn/Fe] OS=Methylomonas J GN=sodB PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.733e-12 Identity = 44/140 (31.43%), Postives = 56/140 (40.00%), Query Frame = 1 Query: 202 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLL------PAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKP 603 + L P Y ALEPH+ T+E H KHH+ Y++N+N + GT + + V A K D L P NN NH FW I+ D G T+FGSGWAWL P Sbjct: 2 YTLPPLDYAYTALEPHIDAQTMEIHHTKHHQTYINNVNAALEGTSFAN-----EPVEALLQKLDSLPENLRGPVRNNGGGHANHSLFWKVLTPNGGGEPKGALADAIKSDIGGLDTFKEAFTKAALTRFGSGWAWLSVTP 136 The following BLAST results are available for this feature:
BLAST of FC923377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923377 ID=FC923377; Name=FC923377; organism=Citrus clementina; type=EST; length=647bpback to top |