FC923378

Overview
NameFC923378
Unique NameFC923378
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC923378 vs. ExPASy Swiss-Prot
Match: MOCS3_CAEEL (Adenylyltransferase and sulfurtransferase MOCS3 OS=Caenorhabditis elegans GN=uba-4 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 9.693e-11
Identity = 33/108 (30.56%), Postives = 60/108 (55.56%), Query Frame = 2 
Query:  224 ILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKD-ISFYNDFNIIVLGLDSIEARSYINAV 544
            +L+VGAGGLGC +   L  +G   + ++D D I + NL+RQ  ++ + VGK KA+  A  +  + S +N+  H   ++  + +  + ++ I+    D++  R  IN V
Sbjct:   40 VLIVGAGGLGCPVATYLGAAGIGTIGIVDYDHISLDNLHRQVAYKEDQVGKSKAQALADNIKLQNSDLNVQVHNTSLDSSNAMQLFKNYEIVCDCTDNVATRYLINDV 147
The following BLAST results are available for this feature:
BLAST of FC923378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
MOCS3_CAEEL9.693e-1130.56Adenylyltransferase and sulfurtransferase MOCS3 OS... [more]

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Properties
Property NameValue
Genbank descriptionC31704D06EF StrClemenN Citrus clementina cDNA clone C31704D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923378 ID=FC923378; Name=FC923378; organism=Citrus clementina; type=EST; length=654bp
AAGACCCAGCGTCAAAGCCAAGCTATCAGCATATTTTCGCAACGGCTAAA
TCAGAACCAAATACAGTGATAGTAAGCGAGTGTGAGAATTGTTGCAAATG
GCTGACACGGCACCGAGCCGATCCCGAGACCTAGACAAGCTCTTACTCCG
AGCCGGTAATCTCGTGGGCCCCACTTTCGAACCCGGCGCAGAATTGAGAG
ATGACTTACAAGAATATGCGCGAATTTTGGTTGTTGGAGCCGGTGGATTG
GGCTGCGAATTGTTGAAAGACTTAGCTTTATCGGGTTTTAAAAACCTAGA
GGTCATTGATATGGACCGTATCGAAGTTTCGAATCTCAATCGCCAGTTTC
TTTTCAGGATGGAAGATGTTGGTAAGCCAAAGGCAGAGGTGGCAGCAAAG
CGTGTCATGGAGAGAGTTAGTGGTGTAAATATTGTCCCACATTTTTGCCG
AATTGAGGATAAAGACATTTCATTTTACAATGATTTTAATATCATTGTCC
TTGGTCTCGATTCCATCGAGGCTCGGAGCTATATAAATGCTGTAGCATGT
AGTTTTCTTGAATATGAGACTGATGACAAGCCACGAGAAGAAACAAATCA
ACCCATGGTAGATGGGGGTACTGAAGGTTTTAAGGGTCATGGCAGGGTTA
TTAT
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