FC923384

Overview
NameFC923384
Unique NameFC923384
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923384 vs. ExPASy Swiss-Prot
Match: COAD_PYRKO (Phosphopantetheine adenylyltransferase OS=Pyrococcus kodakaraensis GN=coaD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 45/128 (35.16%), Postives = 76/128 (59.38%), Query Frame = 2
Query:  302 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIESVDLV 685
            Y  VV+GGTFDRLH GH+  L+ + E+ +  + +G+    M+ NK +AE I P + R++++  +I+ +      +   I    G +   ++LEAIVVS+ET  G L VN+ R ++GL  L I ++ ++
Sbjct:    5 YRKVVVGGTFDRLHLGHKALLRKAFEVGKI-VYIGLTSDEMVRNKPYAERILPYEHRLKDLLKFIE-VNGYTNYRIIKIHTAIGFADSMKSLEAIVVSEETYKGALIVNRAREEKGLKPLDIVTIPII 130          
BLAST of FC923384 vs. ExPASy Swiss-Prot
Match: COAD_PYRFU (Phosphopantetheine adenylyltransferase OS=Pyrococcus furiosus GN=coaD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 43/128 (33.59%), Postives = 75/128 (58.59%), Query Frame = 2
Query:  302 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIESVDLV 685
            Y  VV+GGTFDRLH GH+  L+ + E+  + + +G+    M+  KQ++E I P ++R+ ++  +++ +      +   I +  G +   ++LEAIVVS+ET  G + VNK R + GL  L I  + ++
Sbjct:    5 YKKVVVGGTFDRLHLGHKALLRKAFEVG-EIVYIGLTSDEMIKEKQYSERILPYEKRLLDLIKFLE-VNKYRNYRIMKIHNAIGFTTKIKSLEAIVVSEETYKGAVLVNKAREELGLRPLDIVVIPII 130          
BLAST of FC923384 vs. ExPASy Swiss-Prot
Match: COAD_PYRAB (Phosphopantetheine adenylyltransferase OS=Pyrococcus abyssi GN=coaD PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 43/127 (33.86%), Postives = 77/127 (60.63%), Query Frame = 2
Query:  311 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK--SIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIESVDLV 685
            VV+GGTFDRLH GH+  L+ + E+ +  + +G+    M+ NK +AE I P + R++++  +++  + +   +++   I +  G +    +LEAIVVS+ET  G L VN+ R + GL  L+I  + ++
Sbjct:    6 VVVGGTFDRLHLGHKALLRKAFEVGKI-VYIGLTSDDMVKNKPYAEKILPYERRLKDLIEFLEVNNFRRYRIIK---INNAIGFTTRIRSLEAIVVSEETYKGALLVNRAREEVGLRPLEIIVIPII 128          
BLAST of FC923384 vs. ExPASy Swiss-Prot
Match: COAD_PYRHO (Phosphopantetheine adenylyltransferase OS=Pyrococcus horikoshii GN=coaD PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 43/127 (33.86%), Postives = 76/127 (59.84%), Query Frame = 2
Query:  311 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK--SIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKIESVDLV 685
            VV+GGTFDRLH GH+  L+ + E+ +  + +G+    M+  K +AE I P + R++++  +++  + K   +++   I +  G +    +LEAIVVS+ET  G L VN+ R + GL  L+I  + ++
Sbjct:    7 VVVGGTFDRLHLGHKALLRKAFEVGKI-VYIGLTSDEMVKEKPYAEKILPYERRLKDLIEFLEVNNFKGYRIIK---INNAIGFTTEIRSLEAIVVSEETYKGALIVNRAREEVGLKPLEIIVIPII 129          
The following BLAST results are available for this feature:
BLAST of FC923384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
COAD_PYRKO1.334e-1335.16Phosphopantetheine adenylyltransferase OS=Pyrococc... [more]
COAD_PYRFU1.927e-1233.59Phosphopantetheine adenylyltransferase OS=Pyrococc... [more]
COAD_PYRAB2.516e-1233.86Phosphopantetheine adenylyltransferase OS=Pyrococc... [more]
COAD_PYRHO3.286e-1233.86Phosphopantetheine adenylyltransferase OS=Pyrococc... [more]

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Properties
Property NameValue
Genbank descriptionC31704D12EF StrClemenN Citrus clementina cDNA clone C31704D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923384 ID=FC923384; Name=FC923384; organism=Citrus clementina; type=EST; length=687bp
GACATCATTTATGTACCGGATGCAAGTACAACAACACCGCTCCCGACCCT
CAACCTAACCCGCCGCAAAATGAAACAGTAACAGGATCACCACCATTAGG
GTCAGCAAAGGGCGAGGCAAACAAACAAATCAAGTCCAGATTCGGTGTAC
CTGCCTAAGCGGTCCCACAAAATCGGAATAAAGGGGGCAATTTATTTGCT
AGAAGAAATCATTAATCATTAATCTCGTTCGTCTGTTTTAAATGAAAATG
GCGATTTTGGATGAATCAGTGGTCAATTCCAACATTTCACCCGACAATTC
TTACGGAGCTGTTGTCCTCGGTGGTACCTTTGACCGATTACACGACGGCC
ACCGCCTTTTTCTCAAGGCTTCGGCTGAACTTGCGAGGGATCGAATTGTG
GTTGGAGTTTGTGACGGACCTATGTTGACCAACAAACAGTTTGCAGAGTT
AATTCAACCTGTCGACGAAAGGATGCGTAATGTTGAAGCTTACATCAAGT
CTATTAAGCCAGAGCTTGTAGTGCAAACTGAACCTATTACAGACCCATAT
GGCCCTTCAATTGTTGATGAAAATTTAGAAGCTATCGTTGTCAGCAAGGA
AACATTACCTGGTGGCCTTTCAGTCAATAAGAAGAGAGCTGACAGAGGCC
TATCCCAGCTGAAGATTGAAAGTGTGGATCTAGTTTC
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