FC923451

Overview
NameFC923451
Unique NameFC923451
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length675
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 3.767e-27
Identity = 58/123 (47.15%), Postives = 79/123 (64.23%), Query Frame = 2
Query:  122 SYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGE---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSV-----SGGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWY 466
            ++  AMQLA   VLPM  ++A++L + EI+AKAG    +S  E+AAQL  +N +AP+MLDRMLRLL ++ VL C++        ERLY+L PV K    N DG S+   + +  DKV MESWY
Sbjct:   15 AFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWY 137          

HSP 2 Score: 38.891 bits (89), Expect = 3.767e-27
Identity = 15/28 (53.57%), Postives = 21/28 (75.00%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEYASGNP 645
            L DAV++GG+PFN+ +GM  FEY   +P
Sbjct:  139 LTDAVLDGGVPFNKAYGMTAFEYHGTDP 166          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 4.901e-27
Identity = 61/122 (50.00%), Postives = 79/122 (64.75%), Query Frame = 2
Query:  134 AMQLAMGVVLPMATQAAIQLGVFEIIAKA----GELSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSV----SGG-ERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWYII 472
            AMQLA   VLPMA +AAI+L V EI+AK+    G +S  EIAAQL   N +AP+MLDR+LRLL S+ V+  ++    SG  ERLY L PV K+   N+DG SL  F+    DKV +E W+ +
Sbjct:   25 AMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYL 146          

HSP 2 Score: 40.0466 bits (92), Expect = 4.901e-27
Identity = 15/23 (65.22%), Postives = 21/23 (91.30%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEY 630
            LKDA++EGGIPFN+ +GM+ F+Y
Sbjct:  146 LKDAILEGGIPFNKAYGMNEFDY 168          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.399e-27
Identity = 57/119 (47.90%), Postives = 75/119 (63.03%), Query Frame = 2
Query:  134 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGE---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSG-----GERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWY 466
            AMQLA   VLP    AAI+L + EI+A+AG    L+  E+A+QL  QN  AP+MLDR+ RLL S+ VL C++        ERLY L P+ K+ V N+DG SL     +  D+VF+ESWY
Sbjct:    5 AMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWY 123          

HSP 2 Score: 41.2022 bits (95), Expect = 6.399e-27
Identity = 15/28 (53.57%), Postives = 22/28 (78.57%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEYASGNP 645
            +KDA++EGGIPF++ HGM  F+Y   +P
Sbjct:  125 MKDAILEGGIPFHKAHGMTAFDYPGTDP 152          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.306e-27
Identity = 58/119 (48.74%), Postives = 76/119 (63.87%), Query Frame = 2
Query:  134 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGE---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSV-----SGGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWY 466
            AMQLA   VLPM  +AAI+L + EI+AKAG    LS  ++A+QL  +N +AP+MLDRMLRLL S+ +L  S+        ERLY L PV K+   N+DG S+     +  DKV +ESWY
Sbjct:   23 AMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWY 141          

HSP 2 Score: 40.4318 bits (93), Expect = 8.306e-27
Identity = 16/28 (57.14%), Postives = 22/28 (78.57%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEYASGNP 645
            LKDAV++GGIPFN+ +GM  F+Y   +P
Sbjct:  143 LKDAVLDGGIPFNKAYGMTAFDYHGTDP 170          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 8.309e-27
Identity = 56/123 (45.53%), Postives = 78/123 (63.41%), Query Frame = 2
Query:  122 SYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGE---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSV-----SGGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWY 466
            ++  AMQLA   VLPM  +A ++L + EI+AK+G    +S  E+AAQL  +N +AP+MLDRM RLL ++ VL C++        ERLY+L PV K+   N DG S+   + +  DKV MESWY
Sbjct:   15 AFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWY 137          

HSP 2 Score: 38.891 bits (89), Expect = 8.309e-27
Identity = 15/28 (53.57%), Postives = 21/28 (75.00%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEYASGNP 645
            L DAV++GG+PFN+ +GM  FEY   +P
Sbjct:  139 LTDAVLDGGVPFNKAYGMTTFEYHGTDP 166          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 5.260e-26
Identity = 56/123 (45.53%), Postives = 76/123 (61.79%), Query Frame = 2
Query:  122 SYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGE---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVS-----GGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWY 466
            ++  AMQLA   VLPM  ++AI+L + E+I K+G    +S  ++AAQL   N  A +MLDR+LRLL S+ +LEC +      G ERLY L PV K+   N+DG S+     +  DKV MESWY
Sbjct:   17 NFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWY 139          

HSP 2 Score: 39.2762 bits (90), Expect = 5.260e-26
Identity = 16/28 (57.14%), Postives = 21/28 (75.00%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEYASGNP 645
            L DAV++GGIPFN+ +GM  FEY   +P
Sbjct:  141 LSDAVVDGGIPFNKAYGMTAFEYHGTDP 168          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.160e-25
Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 2
Query:  134 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGE---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSG-----GERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWY 466
            AMQL    VLPM  + AI+L + EI+AKAG    LS  +IA+ L  +N  AP+MLDR+LRLL S+ +L CS+        ERLY L  V K+   N+DG S+     +  DKV MESWY
Sbjct:   22 AMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWY 140          

HSP 2 Score: 42.3578 bits (98), Expect = 1.160e-25
Identity = 17/28 (60.71%), Postives = 22/28 (78.57%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEYASGNP 645
            LKDA++EGGIPFN+ +GM  FEY   +P
Sbjct:  142 LKDAILEGGIPFNKAYGMTAFEYHGTDP 169          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 9.546e-25
Identity = 54/119 (45.38%), Postives = 71/119 (59.66%), Query Frame = 2
Query:  134 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGE---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSG-----GERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWY 466
            A+QL    VLPM  + AI+L + EI+AKAG    L   +IA+ L  +N  AP+MLDR+LRLL S+ +L CS+        ERLY L  V K+   N+DG S+     +  DKV MESWY
Sbjct:   22 ALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWY 140          

HSP 2 Score: 42.3578 bits (98), Expect = 9.546e-25
Identity = 17/28 (60.71%), Postives = 22/28 (78.57%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEYASGNP 645
            LKDA++EGGIPFN+ +GM  FEY   +P
Sbjct:  142 LKDAILEGGIPFNKAYGMTAFEYHGTDP 169          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.619e-24
Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 2
Query:  134 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGELSAP-EIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSG--GERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWY 466
            AMQLA   VLPM  ++AI+L + EII       +P EIA+ L   N  AP M+DR+LRLL  + V+ CSV     +R+Y L PV KY   N+DG S+     +  DKV MESWY
Sbjct:    4 AMQLACASVLPMVLKSAIELDLLEIIRGQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWY 117          

HSP 2 Score: 41.5874 bits (96), Expect = 1.619e-24
Identity = 17/28 (60.71%), Postives = 22/28 (78.57%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEYASGNP 645
            LKDAV++GGIPFN+ +GM  FEY   +P
Sbjct:  119 LKDAVLDGGIPFNKAYGMSSFEYHGTDP 146          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.619e-24
Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 2
Query:  134 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGELSAP-EIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSG--GERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWY 466
            AMQLA   VLPM  ++AI+L + EII       +P EIA+ L   N  AP M+DR+LRLL  + V+ CSV     +R+Y L PV KY   N+DG S+     +  DKV MESWY
Sbjct:    4 AMQLASASVLPMVLKSAIELDLLEIIRGQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWY 117          

HSP 2 Score: 41.5874 bits (96), Expect = 1.619e-24
Identity = 17/28 (60.71%), Postives = 22/28 (78.57%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEYASGNP 645
            LKDAV++GGIPFN+ +GM  FEY   +P
Sbjct:  119 LKDAVLDGGIPFNKAYGMSSFEYHGTDP 146          
The following BLAST results are available for this feature:
BLAST of FC923451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
COMT1_CAPAN3.767e-2747.15Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
IEMT_CLABR4.901e-2750.00(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_EUCGL6.399e-2747.90Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_ROSCH8.306e-2748.74Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_CAPCH8.309e-2745.53Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_OCIBA5.260e-2645.53Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT3_POPKI1.160e-2547.06Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT2_POPTM9.546e-2545.38Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
OMT2_CHRAE1.619e-2446.49Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE1.619e-2446.49Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31705B10EF StrClemenN Citrus clementina cDNA clone C31705B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923451 ID=FC923451; Name=FC923451; organism=Citrus clementina; type=EST; length=675bp
GATGCCAAGTAAAATAAAAGCAATAGTAGTCAACCAAAAATAAAGCAACG
AAACAATGGGTTCTTTATCGGAATATCAAAAACTCGCTCAGAAAAAACAT
GAAGAAGAAGAAGAAGAAGAGAGCTATTCACATGCCATGCAGCTAGCAAT
GGGCGTAGTGCTGCCCATGGCAACCCAGGCAGCTATTCAGCTTGGCGTTT
TTGAAATCATAGCCAAAGCTGGGGAGCTCTCGGCTCCAGAGATTGCAGCG
CAGTTACAAGCGCAAAACGTAAAAGCACCAATGATGCTAGACAGAATGCT
TAGGCTTCTGGTCAGCCACCGTGTGCTTGAGTGCTCTGTTTCTGGTGGCG
AGCGGCTGTATGCTCTCAACCCTGTGTCCAAATATTTTGTTAGTAATAAA
GATGGAGCCTCGTTGGGTCACTTTATGGCCTTGCCTCTCGACAAGGTTTT
CATGGAGAGCTGGTACATTATTATTCTCTCTTTTTTTTTTTTTTTCCCCT
TTCGGGTCAAATCTATATAGTAGTCAATTTAAGTAATTTTAAAAATGCAT
GTAGGTTGGGATTGAAAGATGCAGTTATGGAGGGAGGAATACCATTCAAT
AGGGTGCATGGAATGCACATCTTTGAGTACGCTTCCGGAAACCCCGGTTT
ATGAAACTTATCACGAGGCATGTTC
back to top