FC923472

Overview
NameFC923472
Unique NameFC923472
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.522e-27
Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 1
Query:  433 SIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            S+P S+DWR+KG +  VKDQG CGSCWAFS +AA+E IN I+T  L+SLSEQELVDCD   N+GC+GGLM+ AFEF+ K G
Sbjct:   17 SLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNG 97          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.522e-27
Identity = 67/172 (38.95%), Postives = 97/172 (56.40%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD-TXSNQGCNGGLMELAFEFIKKKG 675
            + +W++ H     ++E+  R  V+++N+    +H  + ++    + + +N F DMT+ EF     G + +  R  +       F        P SVDWR+KG VT VK+QGQCGSCWAFS   A+EG     T KLVSLSEQ LVDC     N+GCNGGLM+ AF+++   G
Sbjct:   29 WTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGK------VFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVADNG 194          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 7.847e-27
Identity = 69/169 (40.83%), Postives = 99/169 (58.58%), Query Frame = 1
Query:  211 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLK----LNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGK-VTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD---------TXSNQGCNGGLMELAFEFIKKKG 675
            S +E  +RF +FK N+  + + N +   +K      +NKFAD+++ EF + Y  +K     +F        ++  + + SIP++ DWR +G+VT VK+QGQCGSCW+FST   VEG + I  NKLVSLSEQ LVDCD            ++GCNGGL   A+ +I K G
Sbjct:   41 SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNK---EAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNG 206          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 7.847e-27
Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD-TXSNQGCNGGLMELAFEFIKKKG 675
            + +W++ H     ++E+  R  V+++N+    +H  +  +    + + +N F DMT+ EF     G + +  R  +       F        P SVDWR+KG VT VK+QGQCGSCWAFS   A+EG     T +L+SLSEQ LVDC     N+GCNGGLM+ AF++++  G
Sbjct:   29 WTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGK------VFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNG 194          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 120.553 bits (301), Expect = 7.847e-27
Identity = 67/165 (40.61%), Postives = 93/165 (56.36%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGS-VTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-DTXSNQGCNGGLMELAFEFI 663
            ++ W S H  + S +E H R   F  N   ++  N  +  +K+ LN+F+DM+  E    Y  S+ ++    +     GT  Y      P SVDWRKKG+ V+ VK+QG CGSCW FST  A+E    I T K++SL+EQ+LVDC    +N GC GGL   AFE+I
Sbjct:   35 FKSWMSKHRKTYSTEEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPY------PPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYI 193          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.025e-26
Identity = 64/153 (41.83%), Postives = 88/153 (57.52%), Query Frame = 1
Query:  220 EKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDT-XSNQGCNGGLMELAFEFIKKKG 675
            E  +RF +F +++  V  TN+   PY+L +N+FADM+  EF ++  G+         G             ++P + DWR+ G V+ VKDQG CGSCW FST  ++E      T K VSLSEQ+LVDC T  +N GC+GGL   AFE+IK  G
Sbjct:   78 EVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNH-----RMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNG 225          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.025e-26
Identity = 68/158 (43.04%), Postives = 92/158 (58.23%), Query Frame = 1
Query:  220 EKHKRFNVFKQNVMHVHQTNKM----DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMY-GKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDT-XSNQGCNGGLMELAFEFIKKKG 675
            E+  R  VF+QN   +   NK     +  +K+ +N+F DMTN EF +   G K       +G+RG    ++  +   + + VDWR K  VT VKDQ QCGSCWAFS   A+EG + +  ++LVSLSEQ+LVDC T   N GC GG M  AF++IK  G
Sbjct:   36 EELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYK-------KGSRGEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNG 186          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26
Identity = 70/188 (37.23%), Postives = 99/188 (52.66%), Query Frame = 1
Query:  136 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD--------TXSNQGCNGGLMELAFEFIKKKG 675
            E ++ + E  + L++R      V  S +E   RF+VFK N+    +  K+D      + +F+D+T  EF   + G +      F+  +           ++P   DWR  G+VT VK+QG CGSCW+FS   A+EG N + T KLVSLSEQ+LVDCD           + GCNGGLM  AFE+  K G
Sbjct:   41 EPQVLTSEDHFSLFKR--KFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSG----FKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTG 222          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26
Identity = 66/175 (37.71%), Postives = 97/175 (55.43%), Query Frame = 1
Query:  169 DLYERW-RSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD-TXSNQGCNGGLMELAFEFIKKKG 675
            DL+ +W R ++      D++H+R N++++NV H+ + N         Y L LN+F DMT  EF + Y     +   +      +G        ++P  +DWR+ G VT VKDQG CGSCWAFST   +EG         +S SEQ+LVDC     N GC+GGLME A++++K+ G
Sbjct:   19 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILS----HGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFG 188          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26
Identity = 60/139 (43.17%), Postives = 82/139 (58.99%), Query Frame = 1
Query:  262 HVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD-TXSNQGCNGGLMELAFEFIKKKG 675
            H  + ++    + + +N F DMTN EF     G + + HR  +       F    +  IP+SVDWR+KG +T VKDQGQCGSCWAFS   A+EG     T KL+SL+EQ LVDC     N+GCNGG M+  F ++++ G
Sbjct:    5 HNQEYSQGKHSFTMAMNAFGDMTNEEFRQVMNGFQYQKHRKGK------QFQERLLPEIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENG 137          
The following BLAST results are available for this feature:
BLAST of FC923472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
CYSPL_SOLLC3.522e-2765.43Low-temperature-induced cysteine proteinase (Fragm... [more]
CATL1_CERAE3.522e-2738.95Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CYSP1_DICDI7.847e-2740.83Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATL1_HUMAN7.847e-2737.79Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATH_HUMAN7.847e-2740.61Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
ORYC_ORYSJ1.025e-2641.83Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CYSP3_HOMAM1.025e-2643.04Digestive cysteine proteinase 3 OS=Homarus america... [more]
RD19A_ARATH1.338e-2637.23Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CATLL_FASHE1.748e-2637.71Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATL6_HUMAN2.283e-2643.17Putative cathepsin L-like protein 6 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionC31705D10EF StrClemenN Citrus clementina cDNA clone C31705D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923472 ID=FC923472; Name=FC923472; organism=Citrus clementina; type=EST; length=677bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTNGATCAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGG
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