FC923476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923476 vs. ExPASy Swiss-Prot
Match: PSB1_DROME (Proteasome subunit beta type-1 OS=Drosophila melanogaster GN=Pros26 PE=1 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 9.200e-45 Identity = 92/198 (46.46%), Postives = 129/198 (65.15%), Query Frame = 1 Query: 118 QHPAWSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD 711 +HP +SPY++NGG+ VAIAG D+ VIAADTR+S+GY+I +R SK+ KL+ + V+ S+G AD +L + R Y+H H + M+ +AQ+LS +Y +RFFPYY N+L G+DNEGKG VY+YD +G E+ Y + G+ TL+ P LDNQ+ + L A L++ AV + F SA ERDIYTGD Sbjct: 18 KHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADK--IKLTKERAVSVASDTFISAAERDIYTGD 213
BLAST of FC923476 vs. ExPASy Swiss-Prot
Match: PSB1_TRYBB (Proteasome subunit beta type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.681e-38 Identity = 94/206 (45.63%), Postives = 125/206 (60.68%), Query Frame = 1 Query: 115 KQHPA-WSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTR-DYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT----PLSEAEAVDLVKTCFASATERDIYTGD 711 K HP WSPY +NGGT AIAG++Y V+ ADTR++ + I TR D SK+ KL D+ +ASSG QAD LQ++L R YQ+ + K S +A+L S LY +RFFPYY+FN++ G+D +G G Y+YD VGS E Y + GS S+ + P LD LL Q VT L+ EA+ ++K F A ERDI+TGD Sbjct: 39 KGHPQHWSPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGVCYSYDPVGSTEPFRYGTCGSASSFVEPLLD--------CLLTRQHMVTQAPADLTMEEALGMLKNAFTGAAERDIFTGD 236
BLAST of FC923476 vs. ExPASy Swiss-Prot
Match: PSB1_CAEEL (Proteasome subunit beta type-1 OS=Caenorhabditis elegans GN=pbs-6 PE=1 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 8.341e-38 Identity = 83/196 (42.35%), Postives = 120/196 (61.22%), Query Frame = 1 Query: 130 WSPYDNNGGTCVAIAGADYCVIAADTRMSTG-YSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDK 714 W+PY GG+ AI+G ++ ++A+DTRM+ +ILTRD KI L D ++ +SGF DV L+K+L +R Y+ + MS A+LLS LYY+RFFPYY+ +L G+D GKG V++YD +G ER+GYS+ G+ +I+PFLD Q+ + L L+ A+ L+K F A ER+I TGDK Sbjct: 44 WNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQI---GHVTLSEGYERPELTLDRAISLMKDSFRGAAEREISTGDK 236
BLAST of FC923476 vs. ExPASy Swiss-Prot
Match: PSB1_YEAST (Proteasome component C5 OS=Saccharomyces cerevisiae GN=PRE7 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.020e-35 Identity = 86/199 (43.22%), Postives = 115/199 (57.79%), Query Frame = 1 Query: 130 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGD 711 ++PY +NGGT + IAG D+ V+A DTR T YSI +R K+ D VM+++GF AD AL K Y HN K++S A+ + + LY KRFFPYY ++ GLD +GKG VY++D VGSYER + G+ ++LIMPFLDNQ+ + V LS E + LV+ F SATER I GD Sbjct: 21 FNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGD 219
BLAST of FC923476 vs. ExPASy Swiss-Prot
Match: PSB1_SCHPO (Probable proteasome subunit beta type-1 OS=Schizosaccharomyces pombe GN=pam1 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.284e-34 Identity = 79/198 (39.90%), Postives = 111/198 (56.06%), Query Frame = 1 Query: 130 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGD 711 + PY NGGT VAIAG + ++A DTR GY+I TR ++ ++ D V+ +SGF+AD AL K + R +Y H ++MS A ++ LY KRFFPYY + + G+D EGKG +Y++D VGSYER + GS + I PFLDNQ+ + + + L EA+ + F SA ER I GD Sbjct: 6 FDPYVQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGKGEIYSFDPVGSYEREWCRAGGSAANFITPFLDNQVNLHNQYVPGSHGKERKPRRLLKLEEAMKITTDAFTSAGERHIEVGD 203
BLAST of FC923476 vs. ExPASy Swiss-Prot
Match: PSB1_ENCCU (Probable proteasome subunit beta type-1 OS=Encephalitozoon cuniculi GN=PRE7 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.131e-25 Identity = 72/194 (37.11%), Postives = 111/194 (57.22%), Query Frame = 1 Query: 130 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD 711 + PY++N GT + + D+ V+A DTR S+ I +R+ SKI ++ D ++ +GF AD + + + I Q++ + ++ A LLS LY KRFFPYYSF VL G + +GK VY+YD +GS+ V GSG ++I P LD+ + + A++ T LS+ + + LV F SA ERD+ T D Sbjct: 83 FDPYEDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGD-FLLTGTGFYADTHEVYVKMV--YEIRQYEVDDSINIHSAANLLSKILYSKRFFPYYSFCVLSGFE-KGKPYVYSYDPIGSFGSVTCVCSGSGRSMIQPLLDSFIDKKN--WNNAEE--TQLSQEDCIRLVVKAFNSAAERDVKTKD 268
BLAST of FC923476 vs. ExPASy Swiss-Prot
Match: PSMB_PYRHO (Proteasome subunit beta OS=Pyrococcus horikoshii GN=psmB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18 Identity = 59/187 (31.55%), Postives = 93/187 (49.73%), Query Frame = 1 Query: 151 GGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD 711 G T V I D V+AAD R S G I R+ +KI K+ + +A +G D+ L +LL A +Y Q K+MS +A LL+N + ++FPY ++ ++GG D + K +Y+ D VG Y++ GSG LD++ K L+ E + L +A +RD+++GD Sbjct: 10 GTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEKPK--LYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKD-------------NLTLEEGIKLAVKAINTAIKRDVFSGD 181
BLAST of FC923476 vs. ExPASy Swiss-Prot
Match: PSB3_SCHPO (Probable proteasome subunit beta type-3 OS=Schizosaccharomyces pombe GN=SPCC63.12c PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16 Identity = 42/121 (34.71%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 148 NGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 510 NGG+CVA+AG + IA+D R+ LT ++ K+ + DK + +G DV+ L +L + +Y+ + +Q+ A L+S+TLY KRF PY+SF V+ G+ N+ + +D++G Sbjct: 7 NGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDVQTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFICGFDSIG 127
BLAST of FC923476 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.084e-16 Identity = 54/187 (28.88%), Postives = 92/187 (49.20%), Query Frame = 1 Query: 151 GGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD 711 G T V + + V+AADTR S G I ++ +KI K+ + +A +G D+ L +LL A +Y+ K+MS +A LL+N L ++FPY + ++GG D + + +++ D VG Y++ GSG LD++ + +S + + L A +RD++TGD Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEKPR--LFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYRE-------------EMSVNDGIKLAVKAINVAIKRDVFTGD 181
BLAST of FC923476 vs. ExPASy Swiss-Prot
Match: PSMB_PYRAB (Proteasome subunit beta OS=Pyrococcus abyssi GN=psmB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.261e-16 Identity = 55/187 (29.41%), Postives = 90/187 (48.13%), Query Frame = 1 Query: 151 GGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD 711 G T V I +D V+AAD R S G + ++ +KI K+ + +A +G D+ L +LL A +Y Q K+MS +A LL+N L R PY ++ ++GG D + + +Y+ D +G Y + GSG LD++ + L E + + SA +RD+++GD Sbjct: 10 GTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEKPR--LYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYRE-------------DLKVREGIKIAVEAINSAIKRDVFSGD 181 The following BLAST results are available for this feature:
BLAST of FC923476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923476 ID=FC923476; Name=FC923476; organism=Citrus clementina; type=EST; length=715bpback to top |