FC923564

Overview
NameFC923564
Unique NameFC923564
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length776
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923564 vs. ExPASy Swiss-Prot
Match: FOLD_ACIF2 (Bifunctional protein folD OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=folD PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.284e-46
Identity = 97/192 (50.52%), Postives = 128/192 (66.67%), Query Frame = 3
Query:   87 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSSLLLKADATVTIVRSHTPD 662
            IDGKA+AQ I ++I+        ++G+ PGLAVV+VG    S+ YV  KR+ CA VGI SF  +LP   +  +L++ + ELN    V GILVQLPLP H + E+++  I++EKDVDGFHP NIG+LA+  R PL   CTP G + LL+ SG+ IKGK AV+VG SNIVG P++  LL A ATVT+    T D
Sbjct:    6 IDGKAIAQKIHADISLRSHAFLRQWGRSPGLAVVLVGADPASRIYVQKKRETCASVGIASFSANLPADTNPQQLLAHIGELNVNDAVDGILVQLPLPPHFDPEEIIEAIAVEKDVDGFHPYNIGRLAL--RAPLLRSCTPAGIMTLLQESGIDIKGKEAVIVGASNIVGRPMALELLLAGATVTVCHRFTRD 195          
BLAST of FC923564 vs. ExPASy Swiss-Prot
Match: FOLD_BACP2 (Bifunctional protein folD OS=Bacillus pumilus (strain SAFR-032) GN=folD PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.289e-46
Identity = 105/194 (54.12%), Postives = 132/194 (68.04%), Query Frame = 3
Query:   78 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDID-LPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSSLLLKADATVTIVRSHT 656
            ATIIDGK  A+  R ++A+EV  L +K G  PGLAV+++G    S SYV  K+KA   +G+  F +D L   ++E EL+  + + NA    HGILVQLPLPKHI+E+ V+  IS EKDVDGFHPLNIGK+ + G D  FLPCTP G +ELL ++GV + GK  VVVGRSNIVG PV  LLL  +ATVT   S T
Sbjct:    3 ATIIDGKETAKEKREQLAKEVEELKQK-GVTPGLAVILIGDDPASLSYVRGKKKAAEAMGMH-FQLDHLDASLTEEELLQLIDQYNANDQFHGILVQLPLPKHISEKAVIERISPEKDVDGFHPLNIGKMLL-GED-TFLPCTPAGIVELLNKTGVNLSGKEVVVVGRSNIVGKPVGQLLLNENATVTYCHSRT 192          
BLAST of FC923564 vs. ExPASy Swiss-Prot
Match: FOLD_BACCQ (Bifunctional protein folD OS=Bacillus cereus (strain Q1) GN=folD PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.289e-46
Identity = 99/201 (49.25%), Postives = 136/201 (67.66%), Query Frame = 3
Query:   78 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSSLLLKADATVTIVRSHTPDPESIVR 680
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT   S T + + + +
Sbjct:    3 AVIIKGNEVAEKKRAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTK 200          
BLAST of FC923564 vs. ExPASy Swiss-Prot
Match: FOLD_BACC7 (Bifunctional protein folD OS=Bacillus cereus (strain AH187) GN=folD PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.289e-46
Identity = 99/201 (49.25%), Postives = 136/201 (67.66%), Query Frame = 3
Query:   78 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSSLLLKADATVTIVRSHTPDPESIVR 680
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT   S T + + + +
Sbjct:    3 AVIIKGNEVAEKKRAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTK 200          
BLAST of FC923564 vs. ExPASy Swiss-Prot
Match: FOLD_BACC1 (Bifunctional protein folD OS=Bacillus cereus (strain ATCC 10987) GN=folD PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.289e-46
Identity = 99/201 (49.25%), Postives = 136/201 (67.66%), Query Frame = 3
Query:   78 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSSLLLKADATVTIVRSHTPDPESIVR 680
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT   S T + + + +
Sbjct:    3 AVIIKGNEVAEKKRAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTK 200          
BLAST of FC923564 vs. ExPASy Swiss-Prot
Match: FOLD_BACA2 (Bifunctional protein folD OS=Bacillus amyloliquefaciens (strain FZB42) GN=folD PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.289e-46
Identity = 103/194 (53.09%), Postives = 135/194 (69.59%), Query Frame = 3
Query:   78 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDID-LPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSSLLLKADATVTIVRSHT 656
            ATIIDGK  A+  R ++A+EV  L  + G VPGLAV+++G    S SYV+ K+KA   +G+K F +D     ++EAEL++ + + N  P+ HGILVQLPLP HI+E+ V+  IS +KDVDGFHPLN+GK+ + G D  FLPCTP G +ELLK++ V + GK  VVVGRSNIVG PV  LLL  +ATVT   S T
Sbjct:    3 ATIIDGKETAKEKREQLAKEVEELKAQ-GVVPGLAVILIGDDPASVSYVTGKKKAAETMGMK-FKLDRFDSSLTEAELLTVIDQYNQNPEFHGILVQLPLPDHISEKAVIERISPDKDVDGFHPLNVGKMLL-GED-TFLPCTPHGIVELLKKTNVDLSGKEVVVVGRSNIVGKPVGQLLLNENATVTYCHSRT 192          
BLAST of FC923564 vs. ExPASy Swiss-Prot
Match: FOLD_WOLSU (Bifunctional protein folD OS=Wolinella succinogenes GN=folD PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.602e-46
Identity = 94/193 (48.70%), Postives = 131/193 (67.88%), Query Frame = 3
Query:   84 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSSLLLKADATVTIVRSHTPD 662
            ++DGKA++  I +++ EEV +L+   G  PGLAV++VG    SQ+YV+MK KAC   GI S   ++PE  +E++L++ +  LN  P++ GILVQLPLPKHIN  KVL  I+  KDVDGFHP N+G+L        F P TP G + LL++ G+  +GK AV+VG SNIVG P++SLLL A+AT T+   +T D
Sbjct:    3 LLDGKALSLEIEAKVKEEVMILTSSRGVTPGLAVILVGSDPASQAYVNMKAKACKRAGIYSITHEMPESTTESQLLNAISILNNDPNIDGILVQLPLPKHINTAKVLEAIAPHKDVDGFHPQNVGRLTSNLGG--FAPATPMGVMRLLQKYGIDPQGKNAVIVGASNIVGKPMASLLLNANATTTLCHIYTKD 193          
BLAST of FC923564 vs. ExPASy Swiss-Prot
Match: FOLD_SHELP (Bifunctional protein folD OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=folD PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.602e-46
Identity = 101/201 (50.25%), Postives = 128/201 (63.68%), Query Frame = 3
Query:   78 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSSLLLKADATVTIVRSHTPDPESIVR 680
            A IIDGKA+AQ+IR +++ +V    E   +VPGLAV++VG    SQ YV  KR+AC EVG  S   DLP + SEA+L++ + + N  P + GILVQLPLP HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++  LL A  T T     T D E  VR
Sbjct:    3 AQIIDGKAIAQSIRKQLSAKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRRACEEVGFLSQSFDLPTETSEADLLALIDKCNEDPSIDGILVQLPLPDHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTRDLEDKVR 201          
BLAST of FC923564 vs. ExPASy Swiss-Prot
Match: FOLD_LACLS (Bifunctional protein folD OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=folD PE=3 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 5.602e-46
Identity = 99/199 (49.75%), Postives = 132/199 (66.33%), Query Frame = 3
Query:   84 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSSLLLKADATVTIVRSHTPDPESIVR 680
            +IDGKA+A  +++E+  +V  L E  G VPGLAV++VG    SQ YV  K +    +G+ S  + LPE VSE EL+  + + N     HGILVQLPLPKHI+EEKVL  I  EKDVDGFHP+N+G+L     +PL +P TP G +E+ +   V + GKRAVV+GRSNIVG P++ LL+ ADATVTI  S T +   + +
Sbjct:    3 LIDGKALAAKMQAELKVKVDKLKEA-GSVPGLAVILVGEDPASQIYVRNKARQATAIGLNSSVVRLPETVSEKELLELIEQYNQSEQWHGILVQLPLPKHISEEKVLLAIDPEKDVDGFHPMNMGRL--WAGNPLMIPSTPAGIMEMFREYNVELSGKRAVVIGRSNIVGKPMAQLLMMADATVTIAHSRTKNLRELTK 198          
BLAST of FC923564 vs. ExPASy Swiss-Prot
Match: FOLD_LACLM (Bifunctional protein folD OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=folD PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.602e-46
Identity = 99/199 (49.75%), Postives = 132/199 (66.33%), Query Frame = 3
Query:   84 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSSLLLKADATVTIVRSHTPDPESIVR 680
            +IDGKA+A  +++E+  +V  L E  G VPGLAV++VG    SQ YV  K +    +G+ S  + LPE VSE EL+  + + N     HGILVQLPLPKHI+EEKVL  I  EKDVDGFHP+N+G+L     +PL +P TP G +E+ +   V + GKRAVV+GRSNIVG P++ LL+ ADATVTI  S T +   + +
Sbjct:    3 LIDGKALAAKMQAELKVKVDKLKEA-GSVPGLAVILVGEDPASQIYVRNKARQATAIGLNSSVVRLPETVSEKELLELIEQYNQSEQWHGILVQLPLPKHISEEKVLLAIDPEKDVDGFHPMNMGRL--WAGNPLMIPSTPAGIMEMFREYNVELSGKRAVVIGRSNIVGKPMAQLLMMADATVTIAHSRTKNLRELTK 198          
The following BLAST results are available for this feature:
BLAST of FC923564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_ACIF23.284e-4650.52Bifunctional protein folD OS=Acidithiobacillus fer... [more]
FOLD_BACP24.289e-4654.12Bifunctional protein folD OS=Bacillus pumilus (str... [more]
FOLD_BACCQ4.289e-4649.25Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_BACC74.289e-4649.25Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_BACC14.289e-4649.25Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_BACA24.289e-4653.09Bifunctional protein folD OS=Bacillus amyloliquefa... [more]
FOLD_WOLSU5.602e-4648.70Bifunctional protein folD OS=Wolinella succinogene... [more]
FOLD_SHELP5.602e-4650.25Bifunctional protein folD OS=Shewanella loihica (s... [more]
FOLD_LACLS5.602e-4649.75Bifunctional protein folD OS=Lactococcus lactis su... [more]
FOLD_LACLM5.602e-4649.75Bifunctional protein folD OS=Lactococcus lactis su... [more]

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Properties
Property NameValue
Genbank descriptionC31706E08EF StrClemenN Citrus clementina cDNA clone C31706E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923564 ID=FC923564; Name=FC923564; organism=Citrus clementina; type=EST; length=776bp
GGAAGGGTGAGTGAGCAATTAATTAGAGTTATCAAATCTCTAGTTCTAGA
ATAATGGCGGCACCGTCAGATCAGAAGGCCACCATAATCGACGGCAAAGC
CGTCGCTCAGACCATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTT
CTGAAAAATATGGCAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGC
AGAAAAGACTCTCAAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGA
AGTTGGGATTAAGTCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGG
CCGAGCTTATCAGCAAGGTTCACGAGCTTAACGCAATGCCTGATGTACAT
GGTATATTGGTTCAACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGT
TTTAGGTGAGATAAGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGA
ACATTGGCAAGCTCGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGC
ACGCCCAAGGGATGCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAA
GGGTAAAAGGGCTGTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAG
TTTCATCGCTGCTGCTGAAAGCTGATGCCACTGTAACCATAGTCCGTTCA
CATACCCCTGATCCTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGC
TGCAGCCGGACAAGCATGATGATCAGGGGAAGTGGGATCAGCTGGTGCTG
CTGTTATTGATGTGAACAATGCTGTC
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