FC923618
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923618 vs. ExPASy Swiss-Prot
Match: RL18_YEAST (60S ribosomal protein L18 OS=Saccharomyces cerevisiae GN=RPL18A PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.514e-58 Identity = 113/189 (59.79%), Postives = 144/189 (76.19%), Query Frame = 2 Query: 68 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV 628 MGID + + RTAPKS+++YLKLLVKLY FL RRTD+ F+KV+LK LF+SK+N+PP+S+SR+ + +K G +K VVVGTVTDD R++E P V ALRFT ARA+I KAGGEC+T DQLA+RAP GQNT++LRGP+N+REAV+HFG PH P + S GRKFERARG+R S+GF+V Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMG---PHKGKAPRILSTGRKFERARGRRRSKGFKV 186
BLAST of FC923618 vs. ExPASy Swiss-Prot
Match: RL18_SPOFR (60S ribosomal protein L18 OS=Spodoptera frugiperda GN=RpL18 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.514e-58 Identity = 118/184 (64.13%), Postives = 144/184 (78.26%), Query Frame = 2 Query: 68 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKG--KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNS 613 MGID I +K +RT KS D+YL+LLVKLYR+L RRT+S F+ +IL+RLFMS++N+PP+SLSRL + MK +E IAVVVGT+T+D+R+Y+VP + V AL TE ARARI AGGE LTFDQLALRAP G TVLL+G +NAREAV+HFGPAPG P SHTKPYVR+KG ERAR +R S Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNSKFNTIILRRLFMSRINRPPLSLSRLARHMKKPTREGMIAVVVGTITNDVRLYKVPKMSVAALHVTEKARARILAAGGEILTFDQLALRAPTGAKTVLLQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--ERARPRRRS 181
BLAST of FC923618 vs. ExPASy Swiss-Prot
Match: RL18_ANOGA (60S ribosomal protein L18 OS=Anopheles gambiae GN=RpL18 PE=3 SV=3) HSP 1 Score: 223.787 bits (569), Expect = 7.315e-58 Identity = 114/189 (60.32%), Postives = 148/189 (78.31%), Query Frame = 2 Query: 68 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDK-IAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR 625 MGID I +K +RT PKS D+YL LLVKLYRFL RRT F+K++++RLFMS+ N PPMSL+R+ MK GK++K +AVV+GTVT+D+R+ +VP L V ALR T+ AR RI K GG+ TFDQLAL +P G+NTVL++G + ARE KHFG APGVPHS+T+PYV+SKGRKFE+ARG+R+S G++ Sbjct: 1 MGID-INHKWDRKVRRTRPKSLDVYLSLLVKLYRFLYRRTKKKFNKIVMRRLFMSRTNHPPMSLNRVAHLMKLRGKDEKSVAVVIGTVTNDVRMMDVPKLNVCALRVTDKARQRILKNGGKIYTFDQLALLSPTGRNTVLMQGKRTAREVFKHFGRAPGVPHSNTRPYVQSKGRKFEKARGRRSSCGYK 188
BLAST of FC923618 vs. ExPASy Swiss-Prot
Match: RL18B_SCHPO (60S ribosomal protein L18-B OS=Schizosaccharomyces pombe GN=rpl18b PE=1 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 7.315e-58 Identity = 121/191 (63.35%), Postives = 141/191 (73.82%), Query Frame = 2 Query: 68 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKGK----EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV 628 MGID I +KS+R+ P S ++YLKLLVKLYRFL RRTDS F+K ILKRLF SK N+PP+S+S++ K E K V+VGTVTDD R+ VP L V ALRFT++ARARI KAGGE LT DQLALRAP G NTVLLRG K+AREA +HFG PH H PYVRS+GRKFERARG+R SR F+V Sbjct: 1 MGID-IERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTVPKLSVAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLLRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERARGRRKSRAFKV 187
BLAST of FC923618 vs. ExPASy Swiss-Prot
Match: RL18A_SCHPO (60S ribosomal protein L18-A OS=Schizosaccharomyces pombe GN=rpl18a PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.553e-58 Identity = 120/191 (62.83%), Postives = 142/191 (74.35%), Query Frame = 2 Query: 68 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKGK----EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV 628 MGID I KKS+R+ P S ++YLKLLVKLYRFL RRTDS F+K ILKRLF SK N+PP+S+S++ K ++K VVVGTVTDD R+ VP L + ALRFT++ARARI KAGGE LT DQLALRAP G NTVL+RG K+AREA +HFG PH H PYVRS+GRKFERARG+R SR F+V Sbjct: 1 MGID-IERHHVKKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASSQNKTTVVVGTVTDDERMLTVPKLSIAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLVRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERARGRRKSRAFKV 187
BLAST of FC923618 vs. ExPASy Swiss-Prot
Match: RL18_CAEBR (60S ribosomal protein L18 OS=Caenorhabditis briggsae GN=rpl-18 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.248e-57 Identity = 113/188 (60.11%), Postives = 144/188 (76.60%), Query Frame = 2 Query: 68 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR 625 MGID I+ + ++RTAPKS + YL+LL KLY FL RRT F+ ++LKRL MS+ N+ P+SL+++ + +K G E K V + TVTDD R+YEVP + + AL TE ARARI AGGE +T DQLALR+P G+NTV L+GP++AREA KHFGPAPGVPHSHTKP+VRSKGRKFERARG+R SR ++ Sbjct: 1 MGID-ISHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQPLSLAKVARVVKQAGNEKKTVVTLSTVTDDARLYEVPKISLAALHVTEGARARILAAGGEIITLDQLALRSPKGENTVFLQGPRSAREAEKHFGPAPGVPHSHTKPHVRSKGRKFERARGRRASRAYK 187
BLAST of FC923618 vs. ExPASy Swiss-Prot
Match: RL18_CAEEL (60S ribosomal protein L18 OS=Caenorhabditis elegans GN=rpl-18 PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.630e-57 Identity = 113/188 (60.11%), Postives = 143/188 (76.06%), Query Frame = 2 Query: 68 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR 625 MGID I + ++RTAPKS + YL+LL KLY FL RRT F+ ++LKRL MS+ N+ P+SL++L + ++ G E+K V + TVTDD R+Y VP + V AL TE ARARI AGGE +T DQLAL++P G+NTV L+GP++AREA KHFGPAPGVPHSHTKPYVRSKGRKFERARG+R SR ++ Sbjct: 1 MGID-INHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQPLSLAKLARAVQKAGNENKTVVTLSTVTDDARLYTVPKISVAALHVTEGARARILAAGGEIITLDQLALKSPKGENTVFLQGPRSAREAEKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRASRAYK 187
BLAST of FC923618 vs. ExPASy Swiss-Prot
Match: RL18_AEDAE (60S ribosomal protein L18 OS=Aedes aegypti GN=RpL18 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.192e-57 Identity = 119/189 (62.96%), Postives = 146/189 (77.25%), Query Frame = 2 Query: 68 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GK-EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR 625 MGID I +K +RT PKS D+YL+LLVKLYRFL RRT F+K+IL+RLFMS+ N+PP+SLSR+ K MK GK E+ IAVVVGTVT+D R P + V ALR TE AR RI K GG+ TFDQLAL AP G+NTVL++G + AREA HFG APGVPHS+T+PYV+SKGRK+E+ARG+R+S GF+ Sbjct: 1 MGID-INHKWDRKVRRTKPKSLDVYLRLLVKLYRFLYRRTHKKFNKIILRRLFMSRTNQPPISLSRVAKLMKLRGKDENTIAVVVGTVTNDDRKLYCPKMNVCALRVTEKARERILKWGGKIYTFDQLALVAPTGKNTVLMQGERTAREAFTHFGRAPGVPHSNTRPYVQSKGRKYEKARGRRSSCGFK 188
BLAST of FC923618 vs. ExPASy Swiss-Prot
Match: RL18_PLUXY (60S ribosomal protein L18 OS=Plutella xylostella GN=RpL18 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.087e-57 Identity = 114/184 (61.96%), Postives = 144/184 (78.26%), Query Frame = 2 Query: 68 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKG--KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNS 613 MGID I +K +RT KS D+YL+LLVKLYR+L RRT++ F++++L+RLFMS++N+PP+SLSRL + MK +E IAVVVGT+T+D R+Y+VP + V AL TE ARARI AGGE LTFDQLALRAP G+ TVL++G +NAREAV+HFGPAPG P SHTKPYVRSKG E+A+ R S Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRPPLSLSRLARHMKKPTREGLIAVVVGTITNDTRLYKVPKMTVAALHVTEKARARILDAGGEILTFDQLALRAPTGRKTVLIQGQRNAREAVRHFGPAPGAPRSHTKPYVRSKGH--EQAKPSRRS 181
BLAST of FC923618 vs. ExPASy Swiss-Prot
Match: RL18_BOMMO (60S ribosomal protein L18 OS=Bombyx mori GN=RpL18 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.379e-56 Identity = 113/184 (61.41%), Postives = 145/184 (78.80%), Query Frame = 2 Query: 68 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKG--KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNS 613 MGID I +K +RT KS DIYL+LLVKLYR+L RRT++ F++++L+RLFMS++N+PP+S+SRL + MK +E IAVVVGTVT+D+R+Y++P + V AL TE ARARI AGGE LTFDQLALRAP G+ TVL++G +NAREAV+HFGPAPG P SHTKPYVR+KG E+AR R + Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDIYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSRRA 181 The following BLAST results are available for this feature:
BLAST of FC923618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923618 ID=FC923618; Name=FC923618; organism=Citrus clementina; type=EST; length=719bpback to top |