FC923619

Overview
NameFC923619
Unique NameFC923619
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length749
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14689 contig Ccv1_Contig14689:207..971. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923619 vs. ExPASy Swiss-Prot
Match: PPA11_ARATH (Purple acid phosphatase 11 OS=Arabidopsis thaliana GN=PAP11 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.521e-30
Identity = 72/179 (40.22%), Postives = 93/179 (51.96%), Query Frame = 1
Query:  211 GDLVGKAVIVSWVT-VDEPGTNTVVYW--SENNKQKEQAEXXXXXXXXXXXXXXXXHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADIYPCHDNNRWDTWGRFVERSVAYQPWIWTAGNHEIDFYPEI 738
            GD  G+A+I+SWV  ++E G+N V YW  S +    + A                 HH TI+ LE++                    P +             DLGQ+Y SN TL +Y  NP KGQ +LFVGDLSYAD +P HD  +WD++GRFVE S AYQPW W AGN+EID+   I
Sbjct:   62 GDNAGRAMIISWVMPLNEDGSNVVTYWIASSDGSDNKNAIATTSSYRYFNYTSGYLHHATIKKLEYD--------------------PSKSRSRCSLHIRYYSDLGQTYASNQTLYNYMSNP-KGQAVLFVGDLSYADDHPNHDQRKWDSYGRFVEPSAAYQPWSWAAGNYEIDYAQSI 219          

HSP 2 Score: 26.1794 bits (56), Expect = 3.521e-30
Identity = 14/34 (41.18%), Postives = 20/34 (58.82%), Query Frame = 2
Query:  110 GKTSSFIRKVEKAIDLPLDADVFQVPPGYNAPQQ 211
            G TS+  R  E + ++ L+   F  P GYNAP+Q
Sbjct:   25 GITSTHARVSEPSEEMSLET--FPPPAGYNAPEQ 56          
BLAST of FC923619 vs. ExPASy Swiss-Prot
Match: PPA19_ARATH (Purple acid phosphatase 19 OS=Arabidopsis thaliana GN=PAP19 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.401e-22
Identity = 63/177 (35.59%), Postives = 82/177 (46.33%), Query Frame = 1
Query:  211 GDLVGKAVIVSWVT-VDEPGTNTVVYWSENNKQKEQAEXXXXXXXXXXXXXXXXHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADIYPCHDNNRWDTWGRFVERSVAYQPWIWTAGNHEIDFYPEI 738
            GD  G+ +I+SWVT ++E G+N V YW  N+   +                      + R+  + + Y Y   I   E                                 TL +Y  NP KGQ +LF GDLSYAD +P HD  +WD++GRFVE S AYQPWIW AGNHEID+   I
Sbjct:   62 GDHAGRGMIISWVTPLNEDGSNVVTYWIANSDGSDNKSALATTS-------------SYRYFNYTSGYLYHATIKGLE---------------------------------TLYNYMSNP-KGQAVLFAGDLSYADDHPNHDQRKWDSYGRFVEPSAAYQPWIWAAGNHEIDYAESI 191          
BLAST of FC923619 vs. ExPASy Swiss-Prot
Match: PPA22_ARATH (Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.119e-18
Identity = 59/167 (35.33%), Postives = 80/167 (47.90%), Query Frame = 1
Query:  238 VSWVTVDEPGTNTVVYWSENNKQKEQAEXXXXXXXXXXXXXXXXHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADIYPCHDNNRWDTWGRFVERSVAYQPWIWTAGNHEIDFYPEI 738
            V+++T D    + V Y  +  K   +A                 HH  I  L+ NT YYY  G    E  F F TPP      P  F ++GDLGQ+  +  TL+H   N +     L  GDLSYAD +       WD++GR VE   + +PW+ T GNHEI+F+P I
Sbjct:   62 VTFITEDNKVESVVEYGKQPGKYDGKATGECTSYKYFFYKSGKIHHVKIGPLQANTTYYYRCGGNGPE--FSFKTPPST---FPVEFAIVGDLGQTEWTAATLSHI--NSQDYDVFLLPGDLSYADTH----QPLWDSFGRLVEPLASKRPWMVTEGNHEIEFFPII 217          
BLAST of FC923619 vs. ExPASy Swiss-Prot
Match: PPA18_ARATH (Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.411e-14
Identity = 57/171 (33.33%), Postives = 79/171 (46.20%), Query Frame = 1
Query:  226 KAVIVSWVTVDEPGTNTVVYWSENNKQKEQAEXXXXXXXXXXXXXXXXHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADIYPCHDNNRWDTWGRFVERSVAYQPWIWTAGNHEIDFYPEI 738
            K + V+WVT D+   + V Y +   K     +                HH  I  LE +T YYY  G    E  F   TPP      P +F + GDLGQ+  +  TL H ++   K    L  GDLSYAD    +  ++WDT+G  V+   + +PW+ T GNHE +  P I
Sbjct:   58 KHMRVTWVTNDKSSPSFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGEGPE--FHLKTPPA---QFPITFAVAGDLGQTGWTKSTLDHIDQC--KYAVHLLPGDLSYAD----YMQHKWDTFGELVQPLASVRPWMVTQGNHEKESIPFI 217          
BLAST of FC923619 vs. ExPASy Swiss-Prot
Match: PPA21_ARATH (Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.406e-14
Identity = 50/121 (41.32%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  370 HHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADIYPCHDNNRWDTWGRFVERSVAYQPWIWTAGNHEIDFYP 732
            HH  I  L+ NTKYYY  G GH + +F F TPP      P  F + GDLGQ+  +  TL    +  R     L  GDLSYAD +       WD++GR +E   + +PW+ T GNHEI+ +P
Sbjct:  110 HHVKIGPLKPNTKYYYRCG-GHGD-EFSFKTPPS---KFPIEFAVAGDLGQTDWTVRTLDQIRK--RDFDVFLLPGDLSYADTH----QPLWDSFGRLLETLASTRPWMVTEGNHEIESFP 219          
BLAST of FC923619 vs. ExPASy Swiss-Prot
Match: PPA20_ARATH (Probable inactive purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.252e-12
Identity = 44/114 (38.60%), Postives = 60/114 (52.63%), Query Frame = 1
Query:  391 LEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADIYPCHDNNRWDTWGRFVERSVAYQPWIWTAGNHEIDFYP 732
            L+ NT YYY  G   + ++F F TPP      P  F + GDLG S  S  TL H  +        +  GDLSYA++Y       WDT+GR V+   + +PW+ T GNHE++  P
Sbjct:  110 LKPNTVYYYKCGGPSSTQEFSFRTPPS---KFPIKFAVSGDLGTSEWSKSTLEHVSKWDY--DVFILPGDLSYANMY----QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIP 214          
The following BLAST results are available for this feature:
BLAST of FC923619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PPA11_ARATH3.521e-3040.22Purple acid phosphatase 11 OS=Arabidopsis thaliana... [more]
PPA19_ARATH2.401e-2235.59Purple acid phosphatase 19 OS=Arabidopsis thaliana... [more]
PPA22_ARATH6.119e-1835.33Purple acid phosphatase 22 OS=Arabidopsis thaliana... [more]
PPA18_ARATH1.411e-1433.33Purple acid phosphatase 18 OS=Arabidopsis thaliana... [more]
PPA21_ARATH2.406e-1441.32Purple acid phosphatase 21 OS=Arabidopsis thaliana... [more]
PPA20_ARATH2.252e-1238.60Probable inactive purple acid phosphatase 20 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC31707B06EF StrClemenN Citrus clementina cDNA clone C31707B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923619 ID=FC923619; Name=FC923619; organism=Citrus clementina; type=EST; length=749bp
GGTTGAGTTGTTTACAGAGAATACTCAAATGGGTTCGCTTGGTTTCTCTT
CTCCTCTTGTTGTTGCCGTTTTGTGTTTGGTTTTGAATGCAGCTTTGCTT
GTTAATGGAGGCAAAACCAGCAGTTTTATCAGGAAAGTTGAAAAGGCCAT
TGATTTGCCCCTTGATGCTGATGTCTTTCAAGTCCCTCCTGGCTATAATG
CTCCTCAACAGGGGATCTTGTGGGGAAGGCAGTGATAGTGTCGTGGGTTA
CAGTGGATGAGCCAGGCACTAATACAGTGGTTTATTGGAGTGAAAATAAC
AAGCAGAAGGAACAGGCTGAGGGCAAAATTTATACTTATAAATACTATAA
TTACACTTCTGGTTACATTCATCACTGCACTATCAGACATTTGGAGTTCA
ATACTAAATATTACTATGTGGTTGGGATTGGACACACCGAAAGACAATTC
TGGTTTGTGACTCCTCCTGAAGTTGGCCCTGATGTCCCATATTCATTTGG
TCTCATTGGGGATCTTGGTCAGAGTTATGATTCAAATGTGACACTTACTC
ATTACGAGAGGAATCCACGAAAAGGGCAGACTCTGTTATTTGTTGGCGAC
TTATCTTATGCTGACATCTATCCTTGTCACGATAATAATAGGTGGGATAC
ATGGGGAAGGTTCGTTGAAAGAAGTGTCGCTTATCAACCTTGGATATGGA
CAGCCGGAAATCACGAAATTGACTTTTACCCAGAAATCAGAATGCTATG
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